Set Analyses:
Advanced Search

Advanced Search

 
Search By
Section (entire)
for


 
or upload a file of gene symbols


Category   Symbol Source: HGNC EntrezGene Ensembl GeneCards RNA genes CroW21
GIFtS

SLC9B2 Gene

protein-coding   GIFtS: 47
GCID: GC04M103946

solute carrier family 9, subfamily B (NHA2, cation proton...

(Previous names: Na+/H+ exchanger domain containing 2, solute carrier family...)
(Previous symbol: NHEDC2)
 Explore 4 diseases affiliated with
SLC9B2 via our new
 Human Malady Compendium 
Biological research products
for SLC9B2
    

(According to 1HGNC, 2Entrez Gene,
3UniProtKB/Swiss-Prot, 4UniProtKB/TrEMBL, 5OMIM, 6GeneLoc, 7Ensembl, 8DME, 9miRBase, and/or 10fRNAdb)
About This Section

Aliases
Solute Carrier Family 9, Subfamily B (NHA2, Cation Proton Antiporter 2),
Member 21 2
     Solute Carrier Family 9 Subfamily B Member 22 3
NHA21 2 3 5     Na(+)/H(+) Exchanger-Like Domain-Containing Protein 22 3
NHEDC21 2 3 5     NHE Domain-Containing Protein 22 3
Na+/H+ Exchanger Domain Containing 21 2     FLJ239841
Solute Carrier Family 9, Subfamily B (Cation Proton Antiporter 2), Member 21 2     NHE102
Mitochondrial Na(+)/H(+) Exchanger NHA22 3     Mitochondrial Sodium/Hydrogen Exchanger 9B22
Sodium/Hydrogen Exchanger-Like Domain-Containing Protein 22 3     Mitochondrial Sodium/Hydrogen Exchanger NHA22

External Ids:    HGNC: 251431   Entrez Gene: 1333082   Ensembl: ENSG000001640387   OMIM: 6117895   UniProtKB: Q86UD53   

Export aliases for SLC9B2 gene to outside databases


(According to Entrez Gene, Tocris Bioscience, Wikipedia's Gene Wiki, PharmGKB,
UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL)
About This Section

Entrez Gene summary for SLC9B2:
Sodium hydrogen antiporters, such as NHEDC2, convert the proton motive force established by the respiratory chain or
the F1F0 mitochondrial ATPase into sodium gradients that drive other energy-requiring processes, transduce
environmental signals into cell responses, or function in drug efflux (Xiang et al., 2007 (PubMed 18000046)).(supplied
by OMIM, Mar 2008)

UniProtKB/Swiss-Prot: SL9B2_HUMAN, Q86UD5
Function: Electroneutral exchange of protons for Na(+) and Li(+) across the inner mitochondrial membrane. Contributes
to the organellar volume homeostasis. Required for osteoclast differentiation and bone resorption activity (By
similarity)




(According to GeneLoc and/or HGNC, and/or
Entrez Gene (NCBI build 37),
and/or miRBase,
Genomic Views according to UCSC (hg19) and Ensembl (release 69), Regulatory elements and Epigenetics data according to QIAGEN, SABiosciences, and/or SwitchGear Genomics)
About This Section
RefSeq DNA sequence:
NC_000004.11  NC_018915.1  NT_016354.19  
Regulatory elements:
   Search SABiosciences Regulatory transcription factor binding sites for SLC9B2
         Other transcription factors

SwitchGear Promoter luciferase reporter plasmidSLC9B2 promoter sequence
   Search SABiosciences Chromatin IP Primers for SLC9B2

Epigenetics:
QIAGEN PyroMark CpG Assay predesigned Pyrosequencing DNA Methylation assays in human, mouse, rat SLC9B2


Genomic Location:
Genomic View: UCSC Golden Path with GeneCards custom track

Entrez Gene cytogenetic band: 4q24   Ensembl cytogenetic band:  4q24   HGNC cytogenetic band: 4q24

SLC9B2 Gene in genomic location: bands according to Ensembl, locations according to (and/or Entrez Gene and/or Ensembl if different)
SLC9B2 gene location

GeneLoc information about chromosome 4         GeneLoc Exon Structure

GeneLoc location for GC04M103946:  view genomic region     (about GC identifiers)

Start:
103,941,025 bp from pter      End:
104,006,986 bp from pter
Size:
65,962 bases      Orientation:
minus strand

(According to 1UniProtKB, HORDE, neXtProt, Ensembl, and/or Reactome, Modification sites according to 2PhosphoSitePlus, Specific Peptides from DME, Protein expression images according to data from SPIRE MOPED and PaxDb, RefSeq according to NCBI, PDB rendering according to OCA and/or Proteopedia, Recombinant Proteins from EMD Millipore, R&D Systems, GenScript, Enzo Life Sciences, OriGene, Novus Biologicals, Sino Biological, ProSpec, and/or Uscn,
Biochemical Assays by EMD Millipore, R&D Systems, OriGene, GenScript, Cell Signaling Technology, Enzo Life Sciences, and/or Uscn, Ontologies according to Gene Ontology Consortium 01 Mar 2013 and Entrez Gene, Antibodies by EMD Millipore, R&D Systems, GenScript, Cell Signaling Technology, OriGene, Novus Biologicals, Thermo Fisher Scientific, Abcam, and/or Uscn)
About This Section

UniProtKB/Swiss-Prot: SL9B2_HUMAN, Q86UD5 (See protein sequence)
Recommended Name: Mitochondrial sodium/hydrogen exchanger 9B2  
Size: 537 amino acids; 57564 Da
Subcellular location: Mitochondrion membrane; Multi-pass membrane protein (By similarity)
Secondary accessions: B5ME52 Q6ZMD8 Q96D95
Alternative splicing: 2 isoforms:  Q86UD5-1   Q86UD5-2   (No experimental confirmation available)

Explore the universe of human proteins at neXtProt for SLC9B2: NX_Q86UD5

Post-translational modifications:

  • View modification sites using PhosphoSitePlus2
  • View neXtProt modification sites for NX_Q86UD5

  • SLC9B2 Protein expression data from MOPED and PaxDb:    About this image 
    SLC9B2 Protein Expression
    REFSEQ proteins: NP_849155.2  
    ENSEMBL proteins: 
     ENSP00000354574   ENSP00000421943   ENSP00000378265   ENSP00000425385   ENSP00000422477  
     ENSP00000426305   ENSP00000423496   ENSP00000345241  
    Reactome Protein details: Q86UD5
    Human Recombinant Protein Products for SLC9B2: 
    Browse Purified and Recombinant Proteins at EMD Millipore
    Browse R&D Systems for human recombinant proteins
    Browse recombinant and purified proteins available from Enzo Life Sciences
    Browse OriGene full length recombinant human proteins expressed in human HEK293 cells
    Browse OriGene Protein Over-expression Lysates
    OriGene Custom Protein Services for SLC9B2 
    GenScript Custom Purified and Recombinant Proteins Services for SLC9B2
    Novus Biologicals SLC9B2 Lysates
    Browse Sino Biological Recombinant Proteins
    Browse ProSpec Recombinant Proteins
    Uscn Proteins for SLC9B2

    Gene Ontology (GO): 2 cellular component terms (GO ID links to tree view):    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0016021integral to membrane IEA--
    GO:0031966mitochondrial membrane IEA--

    SLC9B2 for ontologies           About GeneDecksing



    SLC9B2 Antibody Products: 
    Browse EMD Millipore's Extensive Line of Mono- and Polyclonal Antibodies
    Browse R&D Systems for Antibodies
    Browse OriGene Antibodies
    OriGene Custom Antibody Services for SLC9B2 
    GenScript Custom Superior Antibodies Services for SLC9B2
    Novus Biologicals SLC9B2 Antibodies
    Abcam antibodies for SLC9B2 
    Uscn Antibodies for SLC9B2
    Search ThermoFisher Antibodies for SLC9B2

    Assay Products for SLC9B2: 
    Browse Kits and Assays available from EMD Millipore
    OriGene Custom Immunoassay Development
    Browse OriGene Fluorogenic Cell Assay Kits
    Browse R&D Systems for biochemical assays
    GenScript Custom Assay Services for SLC9B2
    Browse Enzo Life Sciences for kits & assays
    Uscn ELISAs and CLIAs for SLC9B2


    (According to InterPro, ProtoNet, UniProtKB, and/or BLOCKS, Sets of similar genes according to GeneDecks)
    About This Section

    SLC9B2 for domains           About GeneDecksing

    1 InterPro domain/family:
     IPR006153 Cation/H_exchanger

    Graphical View of Domain Structure for InterPro Entry Q86UD5

    ProtoNet protein and cluster: Q86UD5

    1 Blocks protein family: IPB006153 Sodium/hydrogen exchanger

    UniProtKB/Swiss-Prot: SL9B2_HUMAN, Q86UD5
    Similarity: Belongs to the monovalent cation:proton antiporter 1 (CPA1) transporter (TC 2.A.36) family


    (According to 1UniProtKB, Genatlas, LifeMap Discovery™, IUBMB, and/or 2DME, Human phenotypes from GenomeRNAi, Animal models from MGI Mar 06 2013, inGenious Targeting Laboratory,
    bound targets from SABiosciences, miRNA Gene Targets from miRTarBase, shRNA from OriGene, Sirion Biotech, RNAi from EMD Millipore, siRNAs from OriGene, QIAGEN, microRNA from QIAGEN, Gene Editing from DNA2.0, Sirion Biotech, Clones from EMD Millipore, OriGene, SwitchGear Genomics, GenScript, Sino Biological, DNA2.0, and Vector BioLabs, Cell Lines from GenScript, LifeMap BioReagents, Sirion Biotech, In Situ Hybridization Assays from Advanced Cell Diagnostics, Ontologies according to Gene Ontology Consortium 01 Mar 2013 via Entrez Gene.)
    About This Section

    Molecular Function:

         UniProtKB/Swiss-Prot Summary: SL9B2_HUMAN, Q86UD5
    Function: Electroneutral exchange of protons for Na(+) and Li(+) across the inner mitochondrial membrane. Contributes
    to the organellar volume homeostasis. Required for osteoclast differentiation and bone resorption activity (By
    similarity)

         Gene Ontology (GO): 3 molecular function terms (GO ID links to tree view):    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0000166nucleotide binding ----
    GO:0015299solute:hydrogen antiporter activity IEA--
    GO:0016491oxidoreductase activity ----
         
    SLC9B2 for ontologies           About GeneDecksing


    Phenotypes:
         1 MGI mutant phenotype (inferred from 1 allele(MGI details for Slc9b2):
     normal 

    SLC9B2 for phenotypes           About GeneDecksing

    Animal Models:
       inGenious Targeting Laboratory - Customizable classic, inducible, and humanized mouse model solutions for SLC9B2 

    miRNA
    Products:
        
    OriGene 3'-UTR Clone: SLC9B2
    Browse MicroRNA Expression Plasmids
    QIAGEN Custom miScript Target Protector blocks miRNA-binding site of human, mouse, rat SLC9B2
    Search QIAGEN for miScript miRNA Assays for microRNAs that regulate SLC9B2
    SwitchGear 3'UTR luciferase reporter plasmidSLC9B2 3' UTR sequence
    Inhib. RNA
    Products:
        
    Browse for Gene Knock-down Tools from EMD Millipore
    OriGene 29mer shRNA kits in GFP-retroviral vector in human, mouse, rat for SLC9B2 (see all 4)
    OriGene siRNA: SLC9B2
    QIAGEN FlexiTube/FlexiPlate siRNA for gene silencing in human, mouse, rat SLC9B2
    Sirion Biotech Custom design and validation of potent shRNA sequences against SLC9B2 

    Gene Editing
    Products:
    DNA2.0 Custom Protein Engineering Service for SLC9B2
    Sirion Biotech Customized adenovirus for overexpression of SLC9B2 
    Sirion Biotech Customized adenovirus for potent knockdown of SLC9B2

    Clone
    Products:
         
    Browse Clones for the Expression of Recombinant Proteins Available from EMD Millipore
    OriGene Myc/DDK tagged cDNA clones in CMV expression vector in human, mouse, rat for SLC9B2 (see all 3)
    OriGene untagged cDNA clones in CMV expression vector in human, mouse, rat for SLC9B2
    OriGene custom cloning services - gene synthesis, subcloning, mutagenesis, variant library, vector shuttling 
    GenScript Custom all cDNA clones Services for SLC9B2
    Browse Sino Biological Human cDNA Clones
    DNA2.0 Custom Codon Optimized Gene Synthesis Service for SLC9B2
    Vector BioLabs ready-to-use adenovirus/AAV for human, mouse, rat SLC9B2 

    Cell Line
    Products:
         
    GenScript Custom overexpressing Cell Line Services for SLC9B2
    Search LifeMap BioReagents cell lines for SLC9B2
    Sirion Biotech Customized stable knockdown cell line services for SLC9B2 
    Sirion Biotech Customized inducible knockdown cell line services for SLC9B2
    Sirion Biotech Customized stable overexpressing cell line services for SLC9B2
    Sirion Biotech Customized inducible overexpressing cell line services for SLC9B2

    In Situ Assay
    Products:
       

     
    Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for SLC9B2


    (Pathways according to EMD Millipore, R&D Systems, Cell Signaling Technology, KEGG, PharmGKB, BioSystems, Reactome, Tocris Bioscience, GeneGo (Thomson Reuters), QIAGEN, and/or UniProtKB, Sets of similar genes according to GeneDecks, Interaction Networks according to SABiosciences, and/or STRING, Interactions according to 1UniProtKB, 2MINT, 3I2D, and/or 4STRING, with links to IntAct and Ensembl, Ontologies according to Gene Ontology Consortium 01 Mar 2013 via Entrez Gene).
    About This Section

    Unified GeneCards pathways  About this table 
    See pathways by source

    Super-pathwaycontained gene-specific pathways
    1Ion channel transport
    Ion channel transport1.00
    Stimuli-sensing channels0.49
    2SLC-mediated transmembrane transport
    Transmembrane transport of small molecules0.50

    Pathway sources
    See GeneCards unified pathways
    Show all pathways


    3        Reactome Pathways for SLC9B2
        Transmembrane transport of small molecules
    Stimuli-sensing channels
    Ion channel transport



    SLC9B2 for pathways           About GeneDecksing

    Interactions:

        Search SABiosciences Gene Network CentralTM Interacting Genes and Proteins Networks for SLC9B2

    STRING Interaction Network Preview (showing 1 interactants - click image to see more details)

    5 Interacting proteins for SLC9B2 (Q86UD53 ENSP000003545744) via UniProtKB, MINT, STRING, and/or I2D
    InteractantInteraction Details
    GeneCardExternal ID(s)
    CTU2Q2VPK53I2D: score=5 
    DENND6BQ8NEG73I2D: score=5 
    RTFDC1Q9BY423I2D: score=5 
    CACTINQ8WUQ73I2D: score=4 
    UBCENSP000003448184STRING: ENSP00000344818
    About this table

    Gene Ontology (GO): 1 biological process term (GO ID links to tree view):    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0006814sodium ion transport IEA--

    SLC9B2 for ontologies           About GeneDecksing



    (Chemical Compounds according to UniProtKB, Enzo Life Sciences, EMD Millipore, Tocris Bioscience HMDB, BitterDB, and/or Novoseek, and Drugs according to DrugBank, Enzo Life Sciences, and/or PharmGKB, with drugs/clinical trials/news search links to CenterWatch)
    About This Section
    Browse Small Molecules at EMD Millipore
    Browse drugs & compounds from Enzo Life Sciences

    Browse Tocris compounds for SLC9B2
    Search CenterWatch for drugs/clinical trials and news about SLC9B2 / SL9B2 

    (Secondary structures according to fRNAdb,
    GenBank/EMBL/DDBJ Accessions according to
    Unigene (Build 235 Homo sapiens; Mar 10 2013) or GenBank,
    RefSeq according to Entrez Gene,
    DOTS (version 10), and/or AceView, transcript ids from Ensembl with links to UCSC,
    exon structure from GeneLoc, alternative splicing isoforms according to ASD and/or ECgene,
    RNAi Products from EMD Millipore,
    siRNAs from OriGene, QIAGEN, shRNA from OriGene, Sirion Biotech, microRNA from QIAGEN,
    Tagged/untagged cDNA clones from OriGene, SwitchGear Genomics, GenScript, DNA2.0, Vector BioLabs, Primers from OriGene, SABiosciences, and/or QIAGEN )
    About This Section

    REFSEQ mRNAs for SLC9B2 gene: 
    NM_178833.4  

    Unigene Cluster for SLC9B2:

    Solute carrier family 9, subfamily B (NHA2, cation proton antiporter 2), member 2
    Hs.546482  [show with all ESTs]
    Unigene Representative Sequence: BX640844
    12 Ensembl transcripts including schematic representations, and UCSC links where relevant:
    ENST00000362026(uc010iln.2) ENST00000506288 ENST00000394785(uc003hwx.4 uc003hwy.3 uc011cew.2)
    ENST00000503103 ENST00000503230 ENST00000510976 ENST00000515424(uc011cey.2)
    ENST00000503818 ENST00000505838 ENST00000508136 ENST00000512806 ENST00000339611(uc011cex.1)


    miRNA
    Products:
         
    OriGene 3'-UTR Clone: SLC9B2
    Browse OriGene MicroRNA Expression Plasmids
    QIAGEN Custom miScript Target Protector blocks miRNA-binding site of human, mouse, rat SLC9B2
    Search QIAGEN for miScript miRNA Assays for microRNAs that regulate SLC9B2
    SwitchGear 3'UTR luciferase reporter plasmidSLC9B2 3' UTR sequence
    Inhib. RNA
    Products:
         
    Browse for Gene Knock-down Tools from EMD Millipore
    OriGene 29mer shRNA kits in GFP-retroviral vector in human, mouse, rat for SLC9B2 (see all 4)
    OriGene siRNA: SLC9B2
    QIAGEN FlexiTube/FlexiPlate siRNA for gene silencing in human, mouse, rat SLC9B2
    Sirion Biotech Custom design and validation of potent shRNA sequences against SLC9B2 
    Clone
    Products:
         
    OriGene Myc/DDK tagged cDNA clones in CMV expression vector in human, mouse, rat for SLC9B2 (see all 3)
    OriGene untagged cDNA clones in CMV expression vector in human, mouse, rat for SLC9B2
    OriGene custom cloning services - gene synthesis, subcloning, mutagenesis, variant library, vector shuttling 
    GenScript Custom all cDNA clones Services for SLC9B2
    DNA2.0 Custom Codon Optimized Gene Synthesis Service for SLC9B2
    Vector BioLabs ready-to-use adenovirus/AAV for human, mouse, rat SLC9B2 
    Primer
    Products:
        
    OriGene genome-wide validated SYBR primer pairs in human, mouse, rat for SLC9B2
    Browse OriGene validated miRNA SYBR primer pairs
    Search SABiosciences RT2 qPCR Primer Assays in human, mouse, rat SLC9B2
      QIAGEN QuantiTect SYBR Green Assays in human, mouse, rat SLC9B2
      QIAGEN QuantiFast Probe-based Assays in human, mouse, rat SLC9B2

    Additional cDNA sequence: 

    AK172823.1 AK297010.1 AK298506.1 AK299888.1 BC009732.1 BC047447.1 BX640844.1 

    15 DOTS entries:

    DT.407073  DT.100679223  DT.40285522  DT.100712987  DT.95368440  DT.100775719  DT.405763  DT.91646431 
    DT.100664442  DT.121253271  DT.97793914  DT.70102815  DT.92417724  DT.91720702  DT.92007695 

    24/115 AceView cDNA sequences (see all 115):

    AA233152 F10816 BC009732 AI367621 BQ286748 BM971864 BM834042 BF724498 
    BI914487 BX494716 BM683318 BI962996 AI239938 BX640844 BF724499 BX454520 
    BX381078 AA233228 BX359761 Z40158 BM702572 BM669493 BG284074 AF447585 

    GeneLoc Exon Structure

    5 Alternative Splicing Database (ASD) splice patterns (SP) for SLC9B2    About this scheme

    ExUns: 1a · 1b ^ 2 ^ 3 ^ 4a · 4b ^ 5 ^ 6 ^ 7a · 7b ^ 8 ^ 9 ^ 10 ^ 11 ^ 12 ^ 13 ^ 14a · 14b ^ 15
    SP1:                                                  -                       -     -                       -         
    SP2:                                                  -                       -     -                                 
    SP3:                                                  -                       -     -           -     -     -         
    SP4:                                                                          -                                       
    SP5:                                                                                                                  


    ECgene alternative splicing isoforms for SLC9B2

    (RNA expression data according to H-InvDB, NONCODE, miRBase, and RNAdb, Expression images according to data from BioGPS, Illumina Human BodyMap, and CGAP SAGE, Sets of similar genes according to GeneDecks, in vivo and in vitro expression data from LifeMap Discovery™, plus additional links to Genevestigator, and/or SOURCE, and/or BioGPS, and/or UniProtKB,
    PCR Arrays from SABiosciences, Primers from OriGene, SABiosciences, and/or QIAGEN, In Situ Hybridization Assays from Advanced Cell Diagnostics)
    About This Section

    SLC9B2 expression in normal human tissues (normalized intensities)
    See probesets specificity/sensitivity at GeneAnnot
    About this imageBioGPS
    CGAP TAG: CGGAAAAAAA
    SLC9B2 Expression
    About this image

    SLC9B2 expression in embryonic tissues and stem cells
    Expression by the Database of Embryonic development, Stem cell research, and Regenerative medicine    About this table

    4 LifeMap In Vivo Development Anatomical Compartments/Cells 
    Tissue Anatomical Compartment CellCategory (developmental path)
    AdiposeVisceral White AdiposeVisceral White AdipocytesAdipose
    BrainBlood Brain BarrierAdult Endothelial CellsBlood Brain Barrier, Endothelium
    BoneStylopod Long BoneBone
    BoneZeugopod PeriosteumBone
    Expression: Positive    Negative     Selective marker
    Experimental details: Curated     Microarrays     In-situ hybridization

    See SLC9B2 Protein Expression from SPIRE MOPED and PaxDB
    Genevestigator expression for SLC9B2

    SOURCE GeneReport for Unigene cluster: Hs.546482

    UniProtKB/Swiss-Prot: SL9B2_HUMAN, Q86UD5
    Tissue specificity: Detected in red blood cells (at protein level)

        SABiosciences Custom PCR Arrays for SLC9B2
    Primer
    Products:
    OriGene genome-wide validated SYBR primer pairs in human, mouse, rat for SLC9B2
    Browse OriGene validated miRNA SYBR primer pairs
    Search SABiosciences RT2 qPCR Primer Assays in human, mouse, rat SLC9B2
    QIAGEN QuantiTect SYBR Green Assays in human, mouse, rat SLC9B2
    QIAGEN QuantiFast Probe-based Assays in human, mouse, rat SLC9B2
    In Situ
    Assay Products:
     

     
    Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for SLC9B2

    (Orthologs according to 1,2HomoloGene (2older version, for species not in 1newer version), 3euGenes, 4SGD , 5MGI Mar 06 2013, with possible further links to Flybase and/or WormBase, and/or 6Ensembl pan taxonomic compara , Gene Trees according to Ensembl and TreeFam)
    About This Section

    This gene was present in the common ancestor of animals.

    Orthologs for SLC9B2 gene from 5/19 species (see all 19)    About this table
    Organism Taxonomic
    classification
    Gene Description Human
    Similarity
    Orthology
    Type
    Details
    mouse
    (Mus musculus)
    Mammalia Slc9b25
    Nhedc21
    Na+/H+ exchanger domain containing 21, 5 81.9(n)1
    81.34(a)1
      3 (62.55 cM)5
    970861  NM_178877.61  NP_849208.41 
     1353077005 
    chicken
    (Gallus gallus)
    Aves NHEDC21 Na+/H+ exchanger domain containing 2 69.16(n)
    68.58(a)
      428776  XM_426332.3  XP_426332.2 
    zebrafish
    (Danio rerio)
    Actinopterygii LOC5710641 mitochondrial sodium/hydrogen exchanger NHA2-like 62.57(n)
    66.74(a)
      571064  XM_694618.2  XP_699710.2 
    fruit fly
    (Drosophila melanogaster)
    Insecta Nha11 Na[+]/H[+] hydrogen antiporter 1 46.91(n)
    37.07(a)
      33961  NM_164717.1  NP_723224.2 
    worm
    (Caenorhabditis elegans)
    Secernentea F57G8.56
    F41E7.16
    (see all 3)
    Protein F41E7.1
    (see all 3)
    23(a)
    23(a)
    (see all 3)
    possible ortholog
    possible ortholog
    (see all 3)
    V(16339004-16341514)
    X(10279540-10282786)


    ENSEMBL Gene Tree for SLC9B2 (if available)
    TreeFam Gene Tree for SLC9B2 (if available) 

    (Paralogs according to 1HomoloGene,
    2Ensembl, and 3SIMAP, Pseudogenes according to 4Pseudogene.org Build 68)
    About This Section
    Paralogs for SLC9B2 gene
    SLC9B1P12  SLC9B12  
    3 SIMAP similar genes for SLC9B2 using alignment to 5 protein entries:     SL9B2_HUMAN (see all proteins):
    BDH2    SLC9B1    SLC9B1P1

    SLC9B2 for paralogs           About GeneDecksing



    (SNPs/Variants according to the 1NCBI SNP Database, 2Ensembl, 3PupaSUITE, UniProtKB, and DNA2.0, Linkage Disequilibrium by HapMap, Structural Variations(CNVs/InDels/Inversions) from the Database of Genomic Variants, Mutations from the Human Gene Mutation Database (HGMD) and the Locus Specific Mutation Databases (LSDB), Blood group antigen gene mutations by BGMUT, Resequencing Primers from QIAGEN, Cancer Mutation PCR Arrays and Assays and Copy Number PCR Arrays from SABiosciences)
    About This Section

    10/778 NCBI SNPs in SLC9B2 are shown (see all 778    About this table
    Genomic DataTranscription Related DataAllele Frequencies
    SNP IDValidClinical
    significance
    Chr 4 posSequence#AA
    Chg
    TypeMore#Allele
    freq
    PopTotal
    sample
    More
    ----------
    rs1473708101,2
    --103946230(+) TAGGAA/GTGTGA 1 -- int10--------
    rs1848985761,2
    --103946280(+) GATATC/GATCAA 1 -- int10--------
    rs1394714141,2
    --103946330(+) CATCAC/TTTCCT 1 -- int10--------
    rs1899098651,2
    --103946385(+) GGAGAC/TATGGT 1 -- int10--------
    rs1838395881,2
    --103946394(+) GTAGAC/GATCCA 1 -- int10--------
    rs729435121,2
    C--103946619(+) GAGTAT/ACCCTG 1 -- int11Minor allele frequency- A:0.50WA 2
    rs1144946691,2
    F--103946635(+) ATTAAC/TGAACC 1 -- int11Minor allele frequency- T:0.02WA 118
    rs1152314561,2
    F--103946872(+) GCCACT/AGAAAT 1 -- ut311Minor allele frequency- A:0.05WA 118
    rs1494463431,2
    --103946914(+) GATAAA/GGTTTT 1 -- ut310--------
    rs768428101,2
    --103947024(+) AGTAAC/GGGAAG 1 -- ut310--------

    HapMap Linkage Disequilibrium report for SLC9B2 (103941025 - 104006986 bp)
    Structural Variations (Copy Number Variations, Insertions/Deletions, Inversions)
          Database of Genomic Variants (DGV) variations for SLC9B2: --

    SABiosciences Cancer Mutation PCR Assays
    QIAGEN SeqTarget long-range PCR primers in human, mouse, rat for resequencing SLC9B2
    DNA2.0 Custom Variant and Variant Library Synthesis for SLC9B2

    (in which this Gene is Involved, According to MalaCards, OMIM, UniProtKB, the University of Copenhagen DISEASES database, Genatlas, GeneTests, GAD, HuGE Navigator, and/or TGDB.)
    About This Section

    SLC9B2 for disorders           About GeneDecksing

    OMIM gene information: 611789    OMIM disorders: --

    4 diseases for SLC9B2:    About MalaCards
    alcohol dependence    essential hypertension    hypertension    alcoholism


    Export disorders for SLC9B2 gene to outside databases

    (in PubMed. Associations of this gene to articles via 1Entrez Gene, 2UniProtKB/Swiss-Prot, 3HGNC, 4GAD, 5PharmGKB, 6HMDB, 7DrugBank, 8UniProtKB/TrEMBL, 9 Novoseek, and/or 10fRNAdb)
    About This Section

    PubMed articles for SLC9B2 gene, integrated from 9 sources (see all 13):
    (articles sorted by number of sources associating them with SLC9B2)
        Utopia: connect your pdf to the dynamic
    world of online information

    1. Proteomic profile of osteoclast membrane proteins: identification of Na+/H+ exchanger domain containing 2 and its role in osteoclast fusion. (PubMed id 18600791)1, 3 Ha B.G....Park E.K. (2008)
    2. A human Na+/H+ antiporter sharing evolutionary origins with bacterial NhaA may be a candidate gene for essential hypertension. (PubMed id 18000046)1, 2 Xiang M.... Rao R. (2007)
    3. Unconventional chemiosmotic coupling of NHA2, a mammal ian Na+/H+ antiporter, to a plasma membrane H+ gradient. (PubMed id 22948142)1 Kondapalli K.C....Rao R. (2012)
    4. Systematic and quantitative assessment of the ubiquiti n-modified proteome. (PubMed id 21906983)1 Kim W....Gygi S.P. (2011)
    5. A systematic gene-based screen of chr4q22-q32 identif ies association of a novel susceptibility gene, DKK2, with the quantitative tra it of alcohol dependence symptom counts. (PubMed id 20332099)1 Kalsi G....Riley B.P. (2010)
    6. Mutational analysis of NHAoc/NHA2 in Saccharomyces ce revisiae. (PubMed id 20713131)1 Huang X....Battaglino R.A. (2010)
    7. Model-guided mutagenesis drives functional studies of human NHA2, implicated in hypertension. (PubMed id 20053353)1 Schushan M....Ben-Tal N. (2010)
    8. NHA-oc/NHA2: a mitochondrial cation-proton antiporter selectively expressed in osteoclasts. (PubMed id 17988971)1 Battaglino R.A....Stashenko P. (2008)
    9. Characterization of the sodium/hydrogen exchanger NHA2. (PubMed id 18508966)1 Fuster D.G....Moe O.W. (2008)
    10. Generation and annotation of the DNA sequences of human chromosomes 2 and 4. (PubMed id 15815621)2 Hillier L.W....Wilson R.K. (2005)

    (in PubMed, OMIM, and NCBI Bookshelf)
    About This Section
     ANDOR
    Aliases
    Free Text  

      Query String
    PubMed
    OMIM
    NCBI Bookshelf
      (Note: In FireFox, select the above section and copy using Ctrl-C)

    (According to Entrez Gene, HGNC, AceView, euGenes, Ensembl, miRBase, ECgene, Kegg, and/or H-InvDB)
    About This Section
    Entrez Gene: 133308 HGNC: 25143 AceView: LOC150159 Ensembl:ENSG00000164038 euGenes: HUgn133308
    ECgene: SLC9B2 H-InvDB: SLC9B2

    (According to HUGE)
    About This Section
      --

    (According to PharmGKB, ATLAS, HORDE, IMGT, LEIDEN, UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL,
    Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot)
    About This Section
    NameDescription
    PharmGKB entry for SLC9B2 Pharmacogenomics, SNPs, Pathways

    (Patent information from GeneIP,
    Licensable technologies from WIS Yeda, Salk, Tufts,
    IP news from LifeMap Sciences, Inc.)
    About This Section
    Patent Information for SLC9B2 gene:
    Search GeneIP for patents involving SLC9B2

    GeneCards and IP:
    Japan Patent Office Licenses GeneCards     European Patent Office Licenses GeneCards     Improving the IP Search



    (Antibodies, recombinant proteins, and assays from EMD Millipore, R&D Systems, OriGene, QIAGEN, GenScript, Cell Signaling Technology, SABiosciences, Novus Biologicals, Sino Biological, Enzo Life Sciences, Abcam, ProSpec, Uscn, Thermo Fisher Scientific, Gene Editing from DNA2.0 and Sirion Biotech, Clones from EMD Millipore, OriGene, GenScript, Sino Biological, DNA2.0, SwitchGear Genomics, Vector BioLabs, Cell lines from GenScript, LifeMap BioReagents, and Sirion Biotech, PCR Arrays from SABiosciences, Drugs and/or compounds from EMD Millipore, Tocris Bioscience, and/or Enzo Life Sciences, In Situ Hybridization Assays from
    Advanced Cell Diagnostics, Animal models from inGenious Targeting Laboratory)
    About This Section

     
     EMD Millipore Custom Antibody & Bulk Services
     EMD Millipore Preclinical / Clinical Development Services
     EMD Millipore Immunoassay Services
     EMD Millipore Target Screening & Profiling Services

      
     Browse Antibodies   Browse Cell Culture Products  
     Browse ELISAs   Browse Flow Cytometry Kits  
     Browse Primer Pairs   Browse Kinase Activity Assays/Reagents  
     Browse ELISpot Kits/Development Modules   Browse TFB/Immunoprecipitation Assays  
     Browse Apoptosis Detection Kits/Reagents   Browse Ubiquitin Proteasome Pathway (UPP) Assay Kits/Reagents  
     Browse DNA Damage/Repair Kits/Reagents   Browse Multiplex/Array Assay Kits/Reagents  
     Browse Cell Selection/Detection Kits/Reagents   Browse Secondary Antibodies/Controls/Staining Reagents  
     Browse Phosphatase Activity Assays/Reagents   Browse Recombinant/Natural Proteins  
     Browse OriGene Antibodies   Browse OriGene shRNA RFPs  
     OriGene 29mer shRNA kits in GFP-retroviral vector in human, mouse, rat for SLC9B2   OriGene genome-wide validated SYBR primer pairs in human, mouse, rat for SLC9B2  
     Browse OriGene Protein Over-expression Lysates   Browse OriGene Fluorogenic Cell Assay Kits  
     OriGene siRNA for SLC9B2   OriGene 3'-UTR Clone for SLC9B2  
     OriGene untagged cDNA clones in CMV expression vector in human, mouse, rat for SLC9B2   OriGene Myc/DDK tagged cDNA clones in CMV expression vector in human, mouse, rat for SLC9B2  
     Browse OriGene GFP tagged cDNA clones in CMV expression vector   Browse OriGene MicroRNA Expression Plasmids  
     Browse OriGene basic RS shRNAs   Browse OriGene validated miRNA SYBR primer pairs  
     Browse OriGene full length recombinant human proteins expressed in human HEK293 cells   OriGene custom cloning services - gene synthesis, subcloning, mutagenesis, variant library, vector shuttling  
     OriGene Custom Antibody Services for SLC9B2   OriGene Custom Protein Services for SLC9B2  
     OriGene Custom Immunoassay Development  

     
     
     QIAGEN Custom miScript Target Protector blocks miRNA-binding site of in human, mouse, rat SLC9B2
     QIAGEN SeqTarget long-range PCR primers in human, mouse, rat for resequencing SLC9B2
     QIAGEN PyroMark CpG Assay predesigned Pyrosequencing DNA Methylation assays in human, mouse, rat SLC9B2
     QIAGEN FlexiTube/FlexiPlate siRNA for gene silencing in human, mouse, rat SLC9B2
     QIAGEN QuantiFast Probe-based Assays in human, mouse, rat SLC9B2
     QIAGEN QuantiTect SYBR Green Assays in human, mouse, rat SLC9B2
     GenScript Custom Purified and Recombinant Proteins Services for SLC9B2 GenScript Custom cDNA clones with any tag delivered in your preferred vector Services for SLC9B2
     GenScript Custom Assay Services for SLC9B2 GenScript Custom Superior Antibodies Services for SLC9B2
     GenScript Custom overexpressing Cell Line Services for SLC9B2 CloneReady with Over 120,000 Genes
     Gene Synthesis: Any Gene in Any Vector Vector-based siRNA and miRNA, Ready for Transfection
     Gene Mutant Library, Variants up to 10^11 Plasmid Preparation
     Custom Peptide Services
     Search for Antibodies & Assays

     Search Regulatory tfbs for SLC9B2
     Search Chromatin IP Primers for SLC9B2
     Search RT2 qPCR Primer Assays in human, mouse, rat SLC9B2
     Search GNC Networks for SLC9B2
     SABiosciences Custom PCR Arrays for SLC9B2
     Search Tocris compounds for SLC9B2
     Browse Sino Biological Proteins and Antibodies
     Browse Sino Biological cDNA Clones
     Antibodies/Proteins Production Services
     Rabbit Monoclonal Antibody Platform
     Bulk Purchasing
     Search www.enzolifesciences.com for proteins, assays, substrates, inhibitors & antibodies
     Novus Tissue Slides
     SLC9B2 antibodies
     SLC9B2 lysates
     Antibodies for SLC9B2
     See all of Abcam's Antibodies, Kits and Proteins for SLC9B2
     Custom Antibody / Protein Production Service
     Bulk Purchasing
     Advantages of Rabbit Monoclonal antibodies
     Abcam protocols and scientific support
     Browse ProSpec Recombinant Proteins




     SLC9B2 Proteins, Antibodies, CLIAs, and ELISAs
     Search LifeMap BioReagents cell lines for SLC9B2
     Gene Synthesis
     Protein Engineering
     Variant Library Synthesis
     Codon Optimization
     Protein Production and Purification
     Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for SLC9B2
     SwitchGear 3'UTR luciferase reporter plasmids for SLC9B2
     SwitchGear Promoter luciferase reporter plasmids for SLC9B2
     Search ThermoFisher Antibodies for SLC9B2
     Vector BioLabs ready-to-use adenovirus/AAV for human, mouse, rat SLC9B2
     inGenious Targeting Laboratory - Customizable classic, inducible, and humanized mouse model solutions for SLC9B2
    Sirion Biotech Customized:
     stable knockdown cell line services for SLC9B2
     inducible knockdown cell line services for SLC9B2
     design and validation of potent shRNA sequences against SLC9B2
     adenovirus for potent knockdown of SLC9B2
     adenovirus for overexpression of SLC9B2
     stable overexpressing cell line services for SLC9B2
     inducible overexpressing cell line services for SLC9B2
           
    GeneCards Homepage - Last full update: 19 Mar 2013 - Incrementals: 21 Mar 2013 , 15 Apr 2013 , 26 Apr 2013 , 13 May 2013

    View Random Gene

    Category
    VWF
    (GIFTS: 73)
    von Willebrand factor
    GIFtS Group
    The GeneCards human gene database gene index: 1 3 5 6 A B C D E F G H I J K L M N O P Q R S T U V W X Y Z 


    Developed at the Crown Human Genome Center, Department of Molecular Genetics, the Weizmann Institute of Science

    Hot genes      Disease genes      SLC9B2 gene at Home site.
    hostname: 356980-web2.xennexinc.com index build: 106 solr: 1.4