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Aliases for SLC9A9-AS2 Gene

Subcategory (RNA class) for SLC9A9-AS2 Gene

non-coding RNA

Quality Score for this RNA gene is

3

Aliases for SLC9A9-AS2 Gene

  • SLC9A9 Antisense RNA 2 2 3 5
  • SLC9A9 Antisense RNA 2 (Non-Protein Coding) 2

External Ids for SLC9A9-AS2 Gene

Previous GeneCards Identifiers for SLC9A9-AS2 Gene

  • GC00U933748
  • GC03P143101

Summaries for SLC9A9-AS2 Gene

GeneCards Summary for SLC9A9-AS2 Gene

SLC9A9-AS2 (SLC9A9 Antisense RNA 2) is an RNA Gene, and is affiliated with the non-coding RNA class.

Additional gene information for SLC9A9-AS2 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for SLC9A9-AS2 Gene

Genomics for SLC9A9-AS2 Gene

GeneHancer (GH) Regulatory Elements for SLC9A9-AS2 Gene

Promoters and enhancers for SLC9A9-AS2 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH03I143442 Enhancer 1.6 FANTOM5 Ensembl ENCODE dbSUPER 0.2 +62.8 62826 3.4 PKNOX1 ATF1 ARNT BATF RAD21 ZBTB40 EGR1 FOS ATF7 RUNX3 U2SURP ATR XRN1 CHST2 GC03M143367 SLC9A9-AS2 SLC9A9
GH03I143378 Enhancer 0.2 dbSUPER 0.8 -2.8 -2761 0.9 SLC9A9-AS1 SLC9A9-AS2 GC03P143367 GC03M143367 SLC9A9
GH03I143382 Enhancer 0.2 dbSUPER 0.8 +3.3 3282 3.8 SLC9A9-AS2 GC03M143367 SLC9A9
GH03I143430 Enhancer 0.4 ENCODE 0.2 +49.5 49496 0.5 MITF RAD51 USF1 GC03M143367 SLC9A9-AS2 SLC9A9
GH03I143435 Enhancer 0.4 ENCODE dbSUPER 0.2 +55.3 55275 1.9 SLC9A9-AS1 CHST2 GC03M143367 SLC9A9-AS2 SLC9A9
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around SLC9A9-AS2 on UCSC Golden Path with GeneCards custom track

Genomic Locations for SLC9A9-AS2 Gene

Genomic Locations for SLC9A9-AS2 Gene
chr3:143,381,338-143,382,161
(GRCh38/hg38)
Size:
824 bases
Orientation:
Plus strand
chr3:143,100,180-143,101,003
(GRCh37/hg19)

Genomic View for SLC9A9-AS2 Gene

Genes around SLC9A9-AS2 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
SLC9A9-AS2 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for SLC9A9-AS2 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for SLC9A9-AS2 Gene

Proteins for SLC9A9-AS2 Gene

Post-translational modifications for SLC9A9-AS2 Gene

No Post-translational modifications

No data available for DME Specific Peptides for SLC9A9-AS2 Gene

Domains & Families for SLC9A9-AS2 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for SLC9A9-AS2 Gene

Function for SLC9A9-AS2 Gene

Phenotypes From GWAS Catalog for SLC9A9-AS2 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for SLC9A9-AS2 Gene

Localization for SLC9A9-AS2 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for SLC9A9-AS2 Gene

Pathways & Interactions for SLC9A9-AS2 Gene

SuperPathways for SLC9A9-AS2 Gene

No Data Available

Interacting Proteins for SLC9A9-AS2 Gene

Gene Ontology (GO) - Biological Process for SLC9A9-AS2 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for SLC9A9-AS2 Gene

Drugs & Compounds for SLC9A9-AS2 Gene

No Compound Related Data Available

Transcripts for SLC9A9-AS2 Gene

mRNA/cDNA for SLC9A9-AS2 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for SLC9A9-AS2 Gene

No ASD Table

Relevant External Links for SLC9A9-AS2 Gene

GeneLoc Exon Structure for
SLC9A9-AS2
ECgene alternative splicing isoforms for
SLC9A9-AS2

Expression for SLC9A9-AS2 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for SLC9A9-AS2 Gene

genes like me logo Genes that share expression patterns with SLC9A9-AS2: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for SLC9A9-AS2 Gene

Orthologs for SLC9A9-AS2 Gene

Evolution for SLC9A9-AS2 Gene

ENSEMBL:
Gene Tree for SLC9A9-AS2 (if available)
TreeFam:
Gene Tree for SLC9A9-AS2 (if available)

No data available for Orthologs for SLC9A9-AS2 Gene

Paralogs for SLC9A9-AS2 Gene

No data available for Paralogs for SLC9A9-AS2 Gene

Variants for SLC9A9-AS2 Gene

Additional Variant Information for SLC9A9-AS2 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
SLC9A9-AS2

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for SLC9A9-AS2 Gene

Disorders for SLC9A9-AS2 Gene

No disorders were found for SLC9A9-AS2 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for SLC9A9-AS2 Gene

Publications for SLC9A9-AS2 Gene

No publications were found for SLC9A9-AS2 Gene.

Products for SLC9A9-AS2 Gene

Sources for SLC9A9-AS2 Gene

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