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Aliases for SLC7A5 Gene

Aliases for SLC7A5 Gene

  • Solute Carrier Family 7 (Amino Acid Transporter Light Chain, L System), Member 5 2 3
  • MPE16 3 4 6
  • Y+ System Cationic Amino Acid Transporter 3 4
  • Solute Carrier Family 7 Member 5 3 4
  • L-Type Amino Acid Transporter 1 3 4
  • Integral Membrane Protein E16 3 4
  • CD98 Light Chain 3 4
  • 4F2 Light Chain 3 4
  • D16S469E 3 6
  • 4F2 LC 3 4
  • 4F2LC 3 4
  • HLAT1 3 4
  • LAT1 3 4
  • Solute Carrier Family 7 (Cationic Amino Acid Transporter, Y+ System), Member 5 3
  • Sodium-Independent Neutral Amino Acid Transporter LAT1 3
  • Large Neutral Amino Acids Transporter Small Subunit 1 3
  • Large Neutral Amino Acids Transporter 1 3
  • CD98LC 4
  • CD98 3
  • E16 3

External Ids for SLC7A5 Gene

Previous GeneCards Identifiers for SLC7A5 Gene

  • GC16M079198
  • GC16M088894
  • GC16M087604
  • GC16M087645
  • GC16M086421

Summaries for SLC7A5 Gene

GeneCards Summary for SLC7A5 Gene

SLC7A5 (Solute Carrier Family 7 (Amino Acid Transporter Light Chain, L System), Member 5) is a Protein Coding gene. Diseases associated with SLC7A5 include lysinuric protein intolerance. Among its related pathways are Hemostasis and Glucose / Energy Metabolism. GO annotations related to this gene include peptide antigen binding and neutral amino acid transmembrane transporter activity. An important paralog of this gene is SLC7A7.

UniProtKB/Swiss-Prot for SLC7A5 Gene

  • Sodium-independent, high-affinity transport of large neutral amino acids such as phenylalanine, tyrosine, leucine, arginine and tryptophan, when associated with SLC3A2/4F2hc. Involved in cellular amino acid uptake. Acts as an amino acid exchanger. Involved in the transport of L-DOPA across the blood-brain barrier, and that of thyroid hormones triiodothyronine (T3) and thyroxine (T4) across the cell membrane in tissues such as placenta. Plays a role in neuronal cell proliferation (neurogenesis) in brain. Involved in the uptake of methylmercury (MeHg) when administered as the L-cysteine or D,L-homocysteine complexes, and hence plays a role in metal ion homeostasis and toxicity. Involved in the cellular activity of small molecular weight nitrosothiols, via the stereoselective transport of L-nitrosocysteine (L-CNSO) across the transmembrane. May play an important role in high-grade gliomas. Mediates blood-to-retina L-leucine transport across the inner blood-retinal barrier which in turn may play a key role in maintaining large neutral amino acids as well as neurotransmitters in the neural retina. Acts as the major transporter of tyrosine in fibroblasts.

Gene Wiki entry for SLC7A5 Gene

No data available for Entrez Gene Summary , Tocris Summary , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for SLC7A5 Gene

Genomics for SLC7A5 Gene

Regulatory Elements for SLC7A5 Gene

Epigenetics Products

  • DNA Methylation CpG Assay Predesigned for Pyrosequencing in human,mouse,rat

Genomic Location for SLC7A5 Gene

Start:
87,830,023 bp from pter
End:
87,869,494 bp from pter
Size:
39,472 bases
Orientation:
Minus strand

Genomic View for SLC7A5 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for SLC7A5 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for SLC7A5 Gene

Proteins for SLC7A5 Gene

  • Protein details for SLC7A5 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Q01650-LAT1_HUMAN
    Recommended name:
    Large neutral amino acids transporter small subunit 1
    Protein Accession:
    Q01650
    Secondary Accessions:
    • Q8IV97
    • Q9UBN8
    • Q9UP15
    • Q9UQC0

    Protein attributes for SLC7A5 Gene

    Size:
    507 amino acids
    Molecular mass:
    55010 Da
    Quaternary structure:
    • Disulfide-linked heterodimer with the amino acid transport protein SLC3A2/4F2hc.
    Miscellaneous:
    • The uptake of leucine, tyrosine and tryptophan is inhibited by the different iodothyronines, in particular T3. Leucine transport is also inhibited by small zwitterionic amino acids (i.e. glycine, alanine, serine, threonine and cysteine) and by glutamine and asparginine. The uptake of T3 is almost completely blocked by coincubation with leucine, tryptophan, tyrosine, and phenylalanine, or 2-amino-bicyclo-(2,2,1)-heptane-2-carboxylate (BCH). Methionine uptake was inhibited by the L-system substrates L-leucine, BCH, L-cysteine and by the MeHg-L-cysteine complex and structurally related S-ethyl-L-cysteine. MeHg-L-cysteine uptake is inhibited by L-methionine, L-leucine, BCH and S-ethyl-L-cysteine. L-leucine uptake was inhibited by L-CNSO. Tyrosine uptake in fibroblasts was inhibited by D-methionine, and methyl-aminoisobutyric acid (MeAIB)

neXtProt entry for SLC7A5 Gene

Proteomics data for SLC7A5 Gene at MOPED

Post-translational modifications for SLC7A5 Gene

  • Ubiquitination at Lys19 and Lys30
  • Glycosylation at Asn49, Asn230, and Asn340
  • Modification sites at PhosphoSitePlus

Other Protein References for SLC7A5 Gene

ENSEMBL proteins:
Reactome Protein details:
REFSEQ proteins:

Antibody Products

  • Cell Signaling Technology (CST) Antibodies for SLC7A5 (SLC7A5)

No data available for DME Specific Peptides for SLC7A5 Gene

Domains for SLC7A5 Gene

Gene Families for SLC7A5 Gene

Protein Domains for SLC7A5 Gene

Graphical View of Domain Structure for InterPro Entry

Q01650

UniProtKB/Swiss-Prot:

LAT1_HUMAN :
  • Belongs to the amino acid-polyamine-organocation (APC) superfamily. L-type amino acid transporter (LAT) (TC 2.A.3.8) family.
Family:
  • Belongs to the amino acid-polyamine-organocation (APC) superfamily. L-type amino acid transporter (LAT) (TC 2.A.3.8) family.
genes like me logo Genes that share domains with SLC7A5: view

Function for SLC7A5 Gene

Molecular function for SLC7A5 Gene

GENATLAS Biochemistry:
solute carrier family 7,member 5,40kDa,human cell surface glycoprotein 4F2 light chain,heterodimerizing with the cell surface glycoprotein 4F2 heavy chain (CD98) to form a complex mediating L-type (sodium independent exchange) of large neutral amino acids transport,not expressed in the intestine
UniProtKB/Swiss-Prot BiophysicochemicalProperties:
Kinetic parameters: KM=7.9 uM for T4 (in the presence of choline chloride) {ECO:0000269 PubMed:10574970, ECO:0000269 PubMed:11564694, ECO:0000269 PubMed:12117417, ECO:0000269 PubMed:12225859, ECO:0000269 PubMed:18262359}; KM=0.8 uM for T3 (in the presence of choline chloride) {ECO:0000269 PubMed:10574970, ECO:0000269 PubMed:11564694, ECO:0000269 PubMed:12117417, ECO:0000269 PubMed:12225859, ECO:0000269 PubMed:18262359}; KM=12.5 uM for reverse triiodothyronine (rT3) (in the presence of choline chloride) {ECO:0000269 PubMed:10574970, ECO:0000269 PubMed:11564694, ECO:0000269 PubMed:12117417, ECO:0000269 PubMed:12225859, ECO:0000269 PubMed:18262359}; KM=7.9 uM for 3,3-diiodothyronine (in the presence of choline chloride) {ECO:0000269 PubMed:10574970, ECO:0000269 PubMed:11564694, ECO:0000269 PubMed:12117417, ECO:0000269 PubMed:12225859, ECO:0000269 PubMed:18262359}; KM=46 uM for leucine (in the presence of choline chloride) {ECO:0000269 PubMed:10574970, ECO:0000269 PubMed:11564694, ECO:0000269 PubMed:12117417, ECO:0000269 PubMed:12225859, ECO:0000269 PubMed:18262359}; KM=19 uM for tryptophan (in the presence of choline chloride) {ECO:0000269 PubMed:10574970, ECO:0000269 PubMed:11564694, ECO:0000269 PubMed:12117417, ECO:0000269 PubMed:12225859, ECO:0000269 PubMed:18262359}; KM=32 uM for L-leucine {ECO:0000269 PubMed:10574970, ECO:0000269 PubMed:11564694, ECO:0000269 PubMed:12117417, ECO:0000269 PubMed:12225859, ECO:0000269 PubMed:18262359}; KM=10 mM for L-alanine {ECO:0000269 PubMed:10574970, ECO:0000269 PubMed:11564694, ECO:0000269 PubMed:12117417, ECO:0000269 PubMed:12225859, ECO:0000269 PubMed:18262359}; KM=2.2 mM for L-glutamine {ECO:0000269 PubMed:10574970, ECO:0000269 PubMed:11564694, ECO:0000269 PubMed:12117417, ECO:0000269 PubMed:12225859, ECO:0000269 PubMed:18262359}; KM=35 uM for L-histidine {ECO:0000269 PubMed:10574970, ECO:0000269 PubMed:11564694, ECO:0000269 PubMed:12117417, ECO:0000269 PubMed:12225859, ECO:0000269 PubMed:18262359}; KM=740 uM for L-phenylalanine {ECO:0000269 PubMed:10574970, ECO:0000269 PubMed:11564694, ECO:0000269 PubMed:12117417, ECO:0000269 PubMed:12225859, ECO:0000269 PubMed:18262359}; KM=98 uM for MeHg-L-cysteine {ECO:0000269 PubMed:10574970, ECO:0000269 PubMed:11564694, ECO:0000269 PubMed:12117417, ECO:0000269 PubMed:12225859, ECO:0000269 PubMed:18262359}; KM=99 uM for methionine {ECO:0000269 PubMed:10574970, ECO:0000269 PubMed:11564694, ECO:0000269 PubMed:12117417, ECO:0000269 PubMed:12225859, ECO:0000269 PubMed:18262359}; KM=55.2 uM for phenylalanine (in T24 human bladder carcinoma cells) {ECO:0000269 PubMed:10574970, ECO:0000269 PubMed:11564694, ECO:0000269 PubMed:12117417, ECO:0000269 PubMed:12225859, ECO:0000269 PubMed:18262359}; KM=60.4 uM for tyrosine (in T24 human bladder carcinoma cells) {ECO:0000269 PubMed:10574970, ECO:0000269 PubMed:11564694, ECO:0000269 PubMed:12117417, ECO:0000269 PubMed:12225859, ECO:0000269 PubMed:18262359}; KM=16.4 uM for tyrosine (in human fibroblasts) {ECO:0000269 PubMed:10574970, ECO:0000269 PubMed:11564694, ECO:0000269 PubMed:12117417, ECO:0000269 PubMed:12225859, ECO:0000269 PubMed:18262359}; KM=138 uM for Dopa (in T24 human bladder carcinoma cells) {ECO:0000269 PubMed:10574970, ECO:0000269 PubMed:11564694, ECO:0000269 PubMed:12117417, ECO:0000269 PubMed:12225859, ECO:0000269 PubMed:18262359}; KM=96.5 uM for 3-O-methyldopa (in T24 human bladder carcinoma cells) {ECO:0000269 PubMed:10574970, ECO:0000269 PubMed:11564694, ECO:0000269 PubMed:12117417, ECO:0000269 PubMed:12225859, ECO:0000269 PubMed:18262359}; KM=153 uM for alpha-methyltyrosine (in T24 human bladder carcinoma cells) {ECO:0000269 PubMed:10574970, ECO:0000269 PubMed:11564694, ECO:0000269 PubMed:12117417, ECO:0000269 PubMed:12225859, ECO:0000269 PubMed:18262359}; KM=216 uM for alpha-methyldopa (in T24 human bladder carcinoma cells) {ECO:0000269 PubMed:10574970, ECO:0000269 PubMed:11564694, ECO:0000269 PubMed:12117417, ECO:0000269 PubMed:12225859, ECO:0000269 PubMed:18262359}; KM=191 uM for gabapentin (in T24 human bladder carcinoma cells) {ECO:0000269 PubMed:10574970, ECO:0000269 PubMed:11564694, ECO:0000269 PubMed:12117417, ECO:0000269 PubMed:12225859, ECO:0000269 PubMed:18262359}; KM=7.3 uM for triiodothyronine (in T24 human bladder carcinoma cells) {ECO:0000269 PubMed:10574970, ECO:0000269 PubMed:11564694, ECO:0000269 PubMed:12117417, ECO:0000269 PubMed:12225859, ECO:0000269 PubMed:18262359}; KM=162 uM for thyroxine (in T24 human bladder carcinoma cells) {ECO:0000269 PubMed:10574970, ECO:0000269 PubMed:11564694, ECO:0000269 PubMed:12117417, ECO:0000269 PubMed:12225859, ECO:0000269 PubMed:18262359}; KM=75.3 uM for melphanan (in T24 human bladder carcinoma cells) {ECO:0000269 PubMed:10574970, ECO:0000269 PubMed:11564694, ECO:0000269 PubMed:12117417, ECO:0000269 PubMed:12225859, ECO:0000269 PubMed:18262359}; KM=156 uM for BCH (in T24 human bladder carcinoma cells) {ECO:0000269 PubMed:10574970, ECO:0000269 PubMed:11564694, ECO:0000269 PubMed:12117417, ECO:0000269 PubMed:12225859, ECO:0000269 PubMed:18262359};
UniProtKB/Swiss-Prot Function:
Sodium-independent, high-affinity transport of large neutral amino acids such as phenylalanine, tyrosine, leucine, arginine and tryptophan, when associated with SLC3A2/4F2hc. Involved in cellular amino acid uptake. Acts as an amino acid exchanger. Involved in the transport of L-DOPA across the blood-brain barrier, and that of thyroid hormones triiodothyronine (T3) and thyroxine (T4) across the cell membrane in tissues such as placenta. Plays a role in neuronal cell proliferation (neurogenesis) in brain. Involved in the uptake of methylmercury (MeHg) when administered as the L-cysteine or D,L-homocysteine complexes, and hence plays a role in metal ion homeostasis and toxicity. Involved in the cellular activity of small molecular weight nitrosothiols, via the stereoselective transport of L-nitrosocysteine (L-CNSO) across the transmembrane. May play an important role in high-grade gliomas. Mediates blood-to-retina L-leucine transport across the inner blood-retinal barrier which in turn may play a key role in maintaining large neutral amino acids as well as neurotransmitters in the neural retina. Acts as the major transporter of tyrosine in fibroblasts.
UniProtKB/Swiss-Prot Induction:
Expression induced in quiescent peripheral blood lymphocytes after treatment with phorbol myristate acetate (PMA) and phytohemagglutinin (PHA). Expression and the uptake of leucine is stimulated in mononuclear, cytotrophoblast-like choriocarcinoma cells by combined treatment with PMA and calcium ionophore.

Gene Ontology (GO) - Molecular Function for SLC7A5 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0015171 amino acid transmembrane transporter activity ISS --
GO:0015175 neutral amino acid transmembrane transporter activity TAS 9751058
GO:0015179 L-amino acid transmembrane transporter activity --
GO:0015190 L-leucine transmembrane transporter activity IBA --
GO:0015192 L-phenylalanine transmembrane transporter activity IBA --
genes like me logo Genes that share ontologies with SLC7A5: view

Phenotypes for SLC7A5 Gene

genes like me logo Genes that share phenotypes with SLC7A5: view

Animal Models for SLC7A5 Gene

MGI Knock Outs for SLC7A5:

Animal Model Products

CRISPR Products

miRNA Products

Inhibitory RNA Products

  • Predesigned siRNA for gene silencing in human,mouse,rat for SLC7A5

In Situ Assay Products

Flow Cytometry Products

No data available for Enzyme Numbers (IUBMB) , Transcription Factor Targets and HOMER Transcription for SLC7A5 Gene

Localization for SLC7A5 Gene

Subcellular locations from UniProtKB/Swiss-Prot for SLC7A5 Gene

Cytoplasm, cytosol. Apical cell membrane; Multi-pass membrane protein. Note=Located to the plasma membrane by SLC3A2/4F2hc. Localized to the apical membrane of placental syncytiophoblastic cells. Expressed in both luminal and abluminal membranes of brain capillary endothelial cells (By similarity). {ECO:0000250}.

Subcellular locations from

COMPARTMENTS
Jensen Localization Image for SLC7A5 Gene COMPARTMENTS Subcellular localization image for SLC7A5 gene
Compartment Confidence
cytosol 5
plasma membrane 5

Gene Ontology (GO) - Cellular Components for SLC7A5 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005634 nucleus IDA --
GO:0005730 nucleolus IDA --
GO:0005737 cytoplasm IDA --
GO:0005829 cytosol IEA --
GO:0005886 plasma membrane TAS --
genes like me logo Genes that share ontologies with SLC7A5: view

Pathways for SLC7A5 Gene

genes like me logo Genes that share pathways with SLC7A5: view

PCR Array Products

  • Pathway & Disease-focused RT² Profiler PCR Arrays

Gene Ontology (GO) - Biological Process for SLC7A5 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0003333 amino acid transmembrane transport IBA --
GO:0006520 cellular amino acid metabolic process TAS 9751058
GO:0006810 transport TAS 9751058
GO:0006811 ion transport TAS --
GO:0006865 amino acid transport TAS --
genes like me logo Genes that share ontologies with SLC7A5: view

Drugs for SLC7A5 Gene

(8) Drugbank Compounds for SLC7A5 Gene

Compound Status Synonyms Cas Number PubChem ID Type Actions PubMed IDs
Dextrothyroxine
  • D-T4
51-49-0 Transporter approved
Levodopa
  • (-)-3-(3,4-Dihydroxyphenyl)-L-alanine
59-92-7 6047 Transporter approved
Levothyroxine
  • 3,3',5,5'-Tetraiodo-L-thyronine
51-48-9 5819 Transporter approved
Liothyronine
  • 3,3',5-triiodo-L-thyronine
6893-02-3 5920 Transporter approved
Melphalan
  • 3-(P-(Bis(2-chloroethyl)amino)phenyl)-L-alanine
148-82-3 Transporter approved

(2) HMDB Compounds for SLC7A5 Gene

Compound Synonyms Cas Number PubMed IDs
Calcium
  • Ca
7440-70-2
Sodium
  • Sodium
7440-23-5

(17) Novoseek inferred chemical compound relationships for SLC7A5 Gene

Compound -log(P) Hits PubMed IDs
2-aminobicyclo(2,2,1)heptane-2-carboxylic acid 93.8 2
l-amino acid 72.6 9
leucine 68.8 15
phenylalanine 57 9
melphalan 53 7

(1) PharmGKB related drug/compound annotations for SLC7A5 Gene

Drug/compound Annotation
melphalan Clinical Annotation
genes like me logo Genes that share compounds with SLC7A5: view

Transcripts for SLC7A5 Gene

Unigene Clusters for SLC7A5 Gene

Solute carrier family 7 (amino acid transporter light chain, L system), member 5:
Representative Sequences:

CRISPR Products

miRNA Products

Inhibitory RNA Products

  • Predesigned siRNA for gene silencing in human,mouse,rat for SLC7A5

Flow Cytometry Products

Alternative Splicing Database (ASD) splice patterns (SP) for SLC7A5 Gene

No ASD Table

Relevant External Links for SLC7A5 Gene

GeneLoc Exon Structure for
SLC7A5
ECgene alternative splicing isoforms for
SLC7A5

Expression for SLC7A5 Gene

mRNA expression in normal human tissues for SLC7A5 Gene

mRNA expression in embryonic tissues and stem cells from LifeMap Discovery

mRNA differential expression in normal tissues according to GTEx for SLC7A5 Gene

This gene is overexpressed in Esophagus - Mucosa (4.1).

Protein differential expression in normal tissues for SLC7A5 Gene

This gene is overexpressed in Breast (28.7) and Amniocyte (7.5).

Integrated Proteomics: protein expression from ProteomicsDB, PaxDb, MOPED, and MaxQB for SLC7A5 Gene

SOURCE GeneReport for Unigene cluster for SLC7A5 Gene Hs.513797

mRNA Expression by UniProt/SwissProt for SLC7A5 Gene

Q01650-LAT1_HUMAN
Tissue specificity: Expressed abundantly in adult lung, liver, brain, skeletal muscle, placenta, bone marrow, testis, resting lymphocytes and monocytes, and in fetal liver. Weaker expression in thymus, cornea, retina, peripheral leukocytes, spleen, kidney, colon and lymph node. During gestation, expression in the placenta was significantly stronger at full-term than at the mid-trimester stage. Also expressed in all human tumor cell lines tested and in the astrocytic process of primary astrocytic gliomas. Expressed in retinal endothelial cells and in the intestinal epithelial cell line Caco-2.
genes like me logo Genes that share expressions with SLC7A5: view

Expression partners for SLC7A5 Gene

* - Elite partner

Primer Products

In Situ Assay Products

Orthologs for SLC7A5 Gene

This gene was present in the common ancestor of animals.

Orthologs for SLC7A5 Gene

Organism Taxonomy Gene Similarity Type Details
cow
(Bos Taurus)
Mammalia SLC7A5 35
  • 89.97 (n)
  • 93.43 (a)
LAT 36
  • 93 (a)
OneToOne
dog
(Canis familiaris)
Mammalia SLC7A5 35
  • 89.61 (n)
  • 93.1 (a)
SLC7A5 36
  • 92 (a)
OneToOne
mouse
(Mus musculus)
Mammalia Slc7a5 35
  • 87.22 (n)
  • 93.33 (a)
Slc7a5 16
Slc7a5 36
  • 91 (a)
OneToOne
chimpanzee
(Pan troglodytes)
Mammalia SLC7A5 35
  • 99.47 (n)
  • 99.61 (a)
SLC7A5 36
  • 100 (a)
OneToOne
rat
(Rattus norvegicus)
Mammalia Slc7a5 35
  • 87.5 (n)
  • 93.54 (a)
oppossum
(Monodelphis domestica)
Mammalia SLC7A5 36
  • 85 (a)
OneToOne
platypus
(Ornithorhynchus anatinus)
Mammalia SLC7A5 36
  • 88 (a)
OneToOne
chicken
(Gallus gallus)
Aves SLC7A5 35
  • 81.14 (n)
  • 86.01 (a)
SLC7A5 36
  • 75 (a)
OneToMany
SLC7A5 36
  • 88 (a)
OneToMany
lizard
(Anolis carolinensis)
Reptilia -- 36
  • 47 (a)
ManyToMany
tropical clawed frog
(Silurana tropicalis)
Amphibia slc7a5 35
  • 74.53 (n)
  • 84 (a)
Str.17935 35
African clawed frog
(Xenopus laevis)
Amphibia MGC68975 35
zebrafish
(Danio rerio)
Actinopterygii LOC797250 35
  • 74.15 (n)
  • 83.05 (a)
SLC7A5 36
  • 76 (a)
OneToOne
fruit fly
(Drosophila melanogaster)
Insecta CG6070 37
  • 45 (a)
JhI-21 37
  • 51 (a)
mnd 37
  • 52 (a)
JhI-21 35
  • 59.21 (n)
  • 52.85 (a)
CG1607 36
  • 47 (a)
ManyToMany
gb 36
  • 43 (a)
ManyToMany
JhI-21 36
  • 48 (a)
ManyToMany
mnd 36
  • 49 (a)
ManyToMany
African malaria mosquito
(Anopheles gambiae)
Insecta AgaP_AGAP012643 35
  • 50.79 (n)
  • 48.81 (a)
worm
(Caenorhabditis elegans)
Secernentea C55C2.5a 37
  • 31 (a)
C55C2.5b 37
  • 31 (a)
F07C3.7 37
  • 43 (a)
F27C8.1 37
  • 48 (a)
F52H2.2 37
  • 45 (a)
T11F9.4 37
  • 35 (a)
T13A10.10 37
  • 33 (a)
Y53H1C.1 37
  • 33 (a)
aat-2 36
  • 45 (a)
OneToMany
sea squirt
(Ciona intestinalis)
Ascidiacea Cin.5005 35
sea squirt
(Ciona savignyi)
Ascidiacea CSA.8408 36
  • 50 (a)
OneToOne
Species with no ortholog for SLC7A5:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rainbow trout (Oncorhynchus mykiss)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • wheat (Triticum aestivum)

Evolution for SLC7A5 Gene

ENSEMBL:
Gene Tree for SLC7A5 (if available)
TreeFam:
Gene Tree for SLC7A5 (if available)

Paralogs for SLC7A5 Gene

Paralogs for SLC7A5 Gene

(12) SIMAP similar genes for SLC7A5 Gene using alignment to 2 proteins:

Pseudogenes.org Pseudogenes for SLC7A5 Gene

genes like me logo Genes that share paralogs with SLC7A5: view

Variants for SLC7A5 Gene

Sequence variations from dbSNP and Humsavar for SLC7A5 Gene

SNP ID Clin Chr 16 pos Sequence Context AA Info Type MAF
rs55952628 -- 87,831,015(+) GGACC(C/T)GGGGC utr-variant-3-prime
rs55945533 -- 87,857,563(+) CAGGC(A/G)TGAGC intron-variant
rs55936694 -- 87,831,595(+) CCACC(A/T)CTGGC utr-variant-3-prime
rs55822432 -- 87,857,905(+) AGAAT(A/G)GGGCT intron-variant
rs55752516 -- 87,866,305(+) GAAGC(A/G)TACAC intron-variant

Structural Variations from Database of Genomic Variants (DGV) for SLC7A5 Gene

Variant ID Type Subtype PubMed ID
nsv907182 CNV Loss 21882294
nsv457616 CNV Gain 19166990
nsv833322 CNV Loss 17160897
nsv907194 CNV Loss 21882294
nsv907195 CNV Loss 21882294
dgv36n68 CNV Loss 17160897
dgv2958n71 CNV Loss 21882294
dgv2959n71 CNV Loss 21882294
dgv2960n71 CNV Loss 21882294
dgv2961n71 CNV Loss 21882294
dgv2962n71 CNV Loss 21882294
nsv907204 CNV Loss 21882294
nsv907208 CNV Loss 21882294
nsv907209 CNV Loss 21882294
nsv907210 CNV Loss 21882294
esv2668850 CNV Deletion 23128226
nsv907211 CNV Loss 21882294
esv1188587 CNV Insertion 17803354
esv24582 CNV Gain 19812545
nsv907212 CNV Loss 21882294

Relevant External Links for SLC7A5 Gene

HapMap Linkage Disequilibrium report
SLC7A5
Human Gene Mutation Database (HGMD)
SLC7A5

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for SLC7A5 Gene

Disorders for SLC7A5 Gene

MalaCards: The human disease database

MalaCards: The human disease database.

Search for SLC7A5 Gene in MalaCards »

(1) Disease for SLC7A5 Gene

(9) Novoseek inferred disease relationships for SLC7A5 Gene

Disease -log(P) Hits PubMed IDs
lysinuric protein intolerance 67 1
phenylketonurias 42.6 4
glioma 41.7 16
carcinoma squamous cell 41.3 14
oral cancer 39.9 3

Relevant External Links for SLC7A5

Genetic Association Database (GAD)
SLC7A5
Human Genome Epidemiology (HuGE) Navigator
SLC7A5
genes like me logo Genes that share disorders with SLC7A5: view

No data available for OMIM , UniProtKB/Swiss-Prot , University of Copenhagen DISEASES and Genatlas for SLC7A5 Gene

Publications for SLC7A5 Gene

  1. Human L-type amino acid transporter 1 (LAT1): characterization of function and expression in tumor cell lines. (PMID: 11557028) Yanagida O. … Endou H. (Biochim. Biophys. Acta 2001) 3 4 23 25
  2. Human LAT1, a subunit of system L amino acid transporter: molecular cloning and transport function. (PMID: 10049700) Prasad P.D. … Ganapathy V. (Biochem. Biophys. Res. Commun. 1999) 3 4 23
  3. The gene for membrane protein E16 (D16S469E) maps to human chromosome 16q24.3 and is expressed in human brain, thymus, and retina. (PMID: 7829099) Maglott D.R. … Nierman W.C. (Genomics 1994) 2 3 23
  4. Association of 4F2hc with light chains LAT1, LAT2 or y+LAT2 requires different domains. (PMID: 11311135) Broeer A. … Broeer S. (Biochem. J. 2001) 3 4 23
  5. Characterization of the system L amino acid transporter in T24 human bladder carcinoma cells. (PMID: 12225859) Kim D.K. … Endou H. (Biochim. Biophys. Acta 2002) 3 4 23

Products for SLC7A5 Gene

Sources for SLC7A5 Gene

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