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Aliases for SLC6A10P Gene

Aliases for SLC6A10P Gene

  • Solute Carrier Family 6 (Neurotransmitter Transporter), Member 10, Pseudogene 2 3
  • Creatine Transporter-2 2 3
  • Solute Carrier Family 6 (Neurotransmitter Transporter, Creatine), Member 10, Pseudogene 3
  • Solute Carrier Family 6 (Neurotransmitter Transporter, Creatine), Member 10 2
  • Similar To Sodium- And Chloride-Dependent Creatine Transporter 3
  • SLC6A10pA 3
  • SLC6A10 3
  • CT-2 3
  • CT2 3

External Ids for SLC6A10P Gene

Previous Symbols for SLC6A10P Gene

  • SLC6A10

Summaries for SLC6A10P Gene

GeneCards Summary for SLC6A10P Gene

SLC6A10P (Solute Carrier Family 6 (Neurotransmitter Transporter), Member 10, Pseudogene) is a Pseudogene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for SLC6A10P Gene

Genomics for SLC6A10P Gene

Genomic Location for SLC6A10P Gene

Start:
32,877,469 bp from pter
End:
32,885,501 bp from pter
Size:
8,033 bases
Orientation:
Minus strand

Genomic View for SLC6A10P Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for SLC6A10P Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for SLC6A10P Gene

Regulatory Elements for SLC6A10P Gene

Proteins for SLC6A10P Gene

Post-translational modifications for SLC6A10P Gene

No Post-translational modifications

No data available for DME Specific Peptides for SLC6A10P Gene

Domains for SLC6A10P Gene

Gene Families for SLC6A10P Gene

HGNC:
  • SLC :Solute carriers
genes like me logo Genes that share domains with SLC6A10P: view

No data available for Protein Domains and UniProtKB/Swiss-Prot for SLC6A10P Gene

Function for SLC6A10P Gene

miRNA for SLC6A10P Gene

miRTarBase miRNAs that target SLC6A10P

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , Transcription Factor Targeting and HOMER Transcription for SLC6A10P Gene

Localization for SLC6A10P Gene

No data available for Gene Ontology (GO) - Cellular Components for SLC6A10P Gene

Pathways for SLC6A10P Gene

SuperPathways for SLC6A10P Gene

No Data Available

Interacting Proteins for SLC6A10P Gene

Gene Ontology (GO) - Biological Process for SLC6A10P Gene

None

No data available for Pathways by source for SLC6A10P Gene

Transcripts for SLC6A10P Gene

mRNA/cDNA for SLC6A10P Gene

Unigene Clusters for SLC6A10P Gene

Solute carrier family 6 (neurotransmitter transporter, creatine), member 10, pseudogene:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for SLC6A10P Gene

No ASD Table

Relevant External Links for SLC6A10P Gene

GeneLoc Exon Structure for
SLC6A10P
ECgene alternative splicing isoforms for
SLC6A10P

Expression for SLC6A10P Gene

mRNA expression in normal human tissues for SLC6A10P Gene

mRNA differential expression in normal tissues according to GTEx for SLC6A10P Gene

This gene is overexpressed in Testis (41.7).

SOURCE GeneReport for Unigene cluster for SLC6A10P Gene Hs.433146

genes like me logo Genes that share expressions with SLC6A10P: view

Orthologs for SLC6A10P Gene

Evolution for SLC6A10P Gene

ENSEMBL:
Gene Tree for SLC6A10P (if available)
TreeFam:
Gene Tree for SLC6A10P (if available)

No data available for Orthologs for SLC6A10P Gene

Paralogs for SLC6A10P Gene

No data available for Paralogs for SLC6A10P Gene

Variants for SLC6A10P Gene

Sequence variations from dbSNP and Humsavar for SLC6A10P Gene

SNP ID Clin Chr 16 pos Sequence Context AA Info Type MAF
rs364131 -- 32,880,943(+) CAGGG(C/T)GCCAG nc-transcript-variant
rs375866 -- 32,884,067(-) CGCAC(A/G)TGCCC intron-variant
rs382157 -- 32,886,158(-) CATCA(C/T)CCCGG upstream-variant-2KB
rs384388 -- 32,883,909(-) CTTCA(A/G)TGGCC intron-variant
rs393199 -- 32,886,327(-) GGAGC(A/C)CTGCG upstream-variant-2KB

Structural Variations from Database of Genomic Variants (DGV) for SLC6A10P Gene

Variant ID Type Subtype PubMed ID
dgv848e1 CNV Complex 17122850
dgv853e1 CNV Complex 17122850
nsv428325 CNV Gain+Loss 18775914
nsv9439 CNV Gain+Loss 18304495
nsv433444 CNV Gain 18776910
essv11015 CNV CNV 17122850
esv29952 CNV Gain 18421352
esv33069 CNV Loss 17666407
nsv436841 CNV Insertion 17901297
esv2714201 CNV Deletion 23290073
nsv520222 CNV Loss 19592680
nsv527583 CNV Gain 19592680
nsv821684 CNV Gain 15273396
dgv862e1 CNV Complex 17122850
dgv491e199 CNV Deletion 23128226
dgv863e1 CNV Complex 17122850
dgv864e1 CNV Complex 17122850
dgv373e201 CNV Deletion 23290073
dgv2801n71 CNV Gain 21882294
nsv471500 CNV Duplication 19718026
dgv869e1 CNV Complex 17122850
essv7855 CNV CNV 17122850
dgv870e1 CNV Complex 17122850
nsv469746 CNV Gain 16826518
nsv906515 CNV Gain 21882294
dgv871e1 CNV Complex 17122850
dgv872e1 CNV Complex 17122850
nsv827624 CNV Gain 20364138
esv23410 CNV Gain 19812545

Relevant External Links for SLC6A10P Gene

HapMap Linkage Disequilibrium report
SLC6A10P

Disorders for SLC6A10P Gene

No disorders were found for SLC6A10P Gene.

No data available for UniProtKB/Swiss-Prot for SLC6A10P Gene

Publications for SLC6A10P Gene

  1. Assignment of the human creatine transporter type 2 (SLC6A10) to chromosome band 16p11.2 by in situ hybridization. (PMID: 9154116) Xu W. … Emson P.C. (Cytogenet. Cell Genet. 1997) 2 3
  2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 3
  3. The repertoire of solute carriers of family 6: identification of new human and rodent genes. (PMID: 16125675) Hoglund P.J. … Fredriksson R. (Biochem. Biophys. Res. Commun. 2005) 3
  4. Cloning and characterization of the promoter regions from the parent and paralogous creatine transporter genes. (PMID: 24144841) Ndika J.D. … Salomons G.S. (Gene 2014) 3
  5. Euchromatic variant 16p+. Implications in prenatal diagnosis. (PMID: 16634122) LA^pez Pajares I. … Delicado A. (Prenat. Diagn. 2006) 23

Products for SLC6A10P Gene

  • QIAGEN qRT-PCR Assays for microRNAs that regulate SLC6A10P
    • QuantiTect SYBR Green Assays in human,mouse,rat
    • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
    • QuantiFast Probe-based Assays in human,mouse,rat
    • Predesigned siRNA for gene silencing in human,mouse,rat for SLC6A10P
    • Block miRNA regulation of SLC6A10P using miScript Target Protectors

    Sources for SLC6A10P Gene

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