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Aliases for SLC6A10P Gene

Aliases for SLC6A10P Gene

  • Solute Carrier Family 6 Member 10, Pseudogene 2 3
  • Solute Carrier Family 6 (Neurotransmitter Transporter), Member 10, Pseudogene 2 3 5
  • Creatine Transporter-2 2 3
  • Solute Carrier Family 6 (Neurotransmitter Transporter, Creatine), Member 10, Pseudogene 3
  • Solute Carrier Family 6 (Neurotransmitter Transporter, Creatine), Member 10 2
  • SLC6A10pA 3
  • SLC6A10 3
  • CT-2 3
  • CT2 3

External Ids for SLC6A10P Gene

Previous HGNC Symbols for SLC6A10P Gene

  • SLC6A10

Previous GeneCards Identifiers for SLC6A10P Gene

  • GC16M032798

Summaries for SLC6A10P Gene

GeneCards Summary for SLC6A10P Gene

SLC6A10P (Solute Carrier Family 6 Member 10, Pseudogene) is a Pseudogene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for SLC6A10P Gene

Genomics for SLC6A10P Gene

Regulatory Elements for SLC6A10P Gene

Genomic Location for SLC6A10P Gene

Chromosome:
16
Start:
32,877,469 bp from pter
End:
32,885,501 bp from pter
Size:
8,033 bases
Orientation:
Minus strand

Genomic View for SLC6A10P Gene

Genes around SLC6A10P on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
SLC6A10P Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for SLC6A10P Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for SLC6A10P Gene

Proteins for SLC6A10P Gene

Post-translational modifications for SLC6A10P Gene

No Post-translational modifications

No data available for DME Specific Peptides for SLC6A10P Gene

Domains & Families for SLC6A10P Gene

Gene Families for SLC6A10P Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with SLC6A10P: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for SLC6A10P Gene

Function for SLC6A10P Gene

Phenotypes for SLC6A10P Gene

genes like me logo Genes that share phenotypes with SLC6A10P: view

miRNA for SLC6A10P Gene

miRTarBase miRNAs that target SLC6A10P

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Human Phenotype Ontology , Animal Models , Transcription Factor Targets and HOMER Transcription for SLC6A10P Gene

Localization for SLC6A10P Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for SLC6A10P Gene

Pathways & Interactions for SLC6A10P Gene

SuperPathways for SLC6A10P Gene

No Data Available

Interacting Proteins for SLC6A10P Gene

Gene Ontology (GO) - Biological Process for SLC6A10P Gene

None

No data available for Pathways by source and SIGNOR curated interactions for SLC6A10P Gene

Drugs & Compounds for SLC6A10P Gene

No Compound Related Data Available

Transcripts for SLC6A10P Gene

mRNA/cDNA for SLC6A10P Gene

(1) REFSEQ mRNAs :
(4) Additional mRNA sequences :
(23) Selected AceView cDNA sequences:
(3) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for SLC6A10P Gene

Solute carrier family 6 (neurotransmitter transporter, creatine), member 10, pseudogene:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for SLC6A10P Gene

No ASD Table

Relevant External Links for SLC6A10P Gene

GeneLoc Exon Structure for
SLC6A10P
ECgene alternative splicing isoforms for
SLC6A10P

Expression for SLC6A10P Gene

mRNA expression in normal human tissues for SLC6A10P Gene

mRNA differential expression in normal tissues according to GTEx for SLC6A10P Gene

This gene is overexpressed in Testis (x41.7).

SOURCE GeneReport for Unigene cluster for SLC6A10P Gene Hs.433146

genes like me logo Genes that share expression patterns with SLC6A10P: view

In Situ Assay Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , mRNA Expression by UniProt/SwissProt and Protein tissue co-expression partners for SLC6A10P Gene

Orthologs for SLC6A10P Gene

Evolution for SLC6A10P Gene

ENSEMBL:
Gene Tree for SLC6A10P (if available)
TreeFam:
Gene Tree for SLC6A10P (if available)

No data available for Orthologs for SLC6A10P Gene

Paralogs for SLC6A10P Gene

No data available for Paralogs for SLC6A10P Gene

Variants for SLC6A10P Gene

Sequence variations from dbSNP and Humsavar for SLC6A10P Gene

SNP ID Clin Chr 16 pos Sequence Context AA Info Type
rs375866 -- 32,884,067(-) CGCAC(A/G)TGCCC intron-variant
rs382157 -- 32,886,158(-) CATCA(C/T)CCCGG upstream-variant-2KB
rs672448 -- 32,884,800(+) AGAGG(A/G)ACAGA intron-variant
rs689962 -- 32,879,046(-) TCACC(A/G)TGGGG intron-variant
rs690016 -- 32,878,526(-) CCAGG(C/T)TCTGC intron-variant

Structural Variations from Database of Genomic Variants (DGV) for SLC6A10P Gene

Variant ID Type Subtype PubMed ID
dgv848e1 CNV Complex 17122850
dgv853e1 CNV Complex 17122850
nsv428325 CNV Gain+Loss 18775914
nsv9439 CNV Gain+Loss 18304495
nsv433444 CNV Gain 18776910
essv11015 CNV CNV 17122850
esv29952 CNV Gain 18421352
esv33069 CNV Loss 17666407
nsv436841 CNV Insertion 17901297
esv2714201 CNV Deletion 23290073
nsv520222 CNV Loss 19592680
nsv527583 CNV Gain 19592680
nsv821684 CNV Gain 15273396
dgv862e1 CNV Complex 17122850
dgv491e199 CNV Deletion 23128226
dgv863e1 CNV Complex 17122850
dgv864e1 CNV Complex 17122850
dgv373e201 CNV Deletion 23290073
dgv2801n71 CNV Gain 21882294
nsv471500 CNV Duplication 19718026
dgv869e1 CNV Complex 17122850
essv7855 CNV CNV 17122850
dgv870e1 CNV Complex 17122850
nsv469746 CNV Gain 16826518
nsv906515 CNV Gain 21882294
dgv871e1 CNV Complex 17122850
dgv872e1 CNV Complex 17122850
nsv827624 CNV Gain 20364138
esv23410 CNV Gain 19812545

Relevant External Links for SLC6A10P Gene

HapMap Linkage Disequilibrium report
SLC6A10P

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for SLC6A10P Gene

Disorders for SLC6A10P Gene

Relevant External Links for SLC6A10P

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
SLC6A10P

No disorders were found for SLC6A10P Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for SLC6A10P Gene

Publications for SLC6A10P Gene

  1. Assignment of the human creatine transporter type 2 (SLC6A10) to chromosome band 16p11.2 by in situ hybridization. (PMID: 9154116) Xu W. … Emson P.C. (Cytogenet. Cell Genet. 1997) 2 3 67
  2. Cloning and characterization of the promoter regions from the parent and paralogous creatine transporter genes. (PMID: 24144841) Ndika J.D. … Salomons G.S. (Gene 2014) 3
  3. Euchromatic variant 16p+. Implications in prenatal diagnosis. (PMID: 16634122) LA^pez Pajares I. … Delicado A. (Prenat. Diagn. 2006) 23
  4. The repertoire of solute carriers of family 6: identification of new human and rodent genes. (PMID: 16125675) Hoglund P.J. … Fredriksson R. (Biochem. Biophys. Res. Commun. 2005) 3
  5. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 3

Products for SLC6A10P Gene

Sources for SLC6A10P Gene

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