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Category   Symbol Source: HGNC EntrezGene Ensembl GeneCards RNA genes CroW21
GIFtS

SLC39A10 Gene

protein-coding   GIFtS: 54
GCID: GC02P196440

solute carrier family 39 (zinc transporter), member 10

(Previous names: solute carrier family 39 (metal ion transporter), member...)
 Explore 2 diseases affiliated with
SLC39A10 via
MalaCards
our new
 Human Malady Compendium 
Biological research products
for SLC39A10    

Aliases
for SLC39A10 gene

(According to 1HGNC, 2Entrez Gene,
3UniProtKB/Swiss-Prot, 4UniProtKB/TrEMBL, 5OMIM, 6GeneLoc, 7Ensembl, 8DME, 9miRBase, and/or 10fRNAdb)
About This Section
Aliases
Solute Carrier Family 39 (Zinc Transporter), Member 101 2     DKFZp564L21231
Solute Carrier Family 39 (Metal Ion Transporter), Member 101 2     FLJ905151
KIAA12651 3     LZT-Hs22
Solute Carrier Family 39 Member 102 3     Zinc Transporter ZIP102
Zrt- And Irt-Like Protein 102 3     ZIP103
ZIP-102 3     

External Ids:    HGNC: 208611   Entrez Gene: 571812   Ensembl: ENSG000001969507   OMIM: 6087335   UniProtKB: Q9ULF53   

Export aliases for SLC39A10 gene to outside databases

Previous GC identifers: GC00U912989 GC02P196724 GC02P196347 GC02P196229 GC02P188374


Summaries
for SLC39A10 gene

(According to Entrez Gene, Tocris Bioscience, Wikipedia's Gene Wiki, PharmGKB,
UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL)
About This Section
Entrez Gene summary for SLC39A10:
Zinc is an essential cofactor for hundreds of enzymes. It is involved in protein, nucleic acid, carbohydrate, and lipid
metabolism, as well as in the control of gene transcription, growth, development, and differentiation. SLC39A10
belongs to a subfamily of proteins that show structural characteristics of zinc transporters (Taylor and Nicholson,
2003 (PubMed 12659941)).(supplied by OMIM, Mar 2008)

UniProtKB/Swiss-Prot: S39AA_HUMAN, Q9ULF5
Function: May act as a zinc-influx transporter

Gene Wiki entry for SLC39A10


Genomic Views
for SLC39A10 gene

(According to GeneLoc and/or HGNC, and/or
Entrez Gene (NCBI build 37),
and/or miRBase,
Genomic Views according to UCSC (hg19) and Ensembl (release 69), Regulatory elements and Epigenetics data according to QIAGEN, SABiosciences, and/or SwitchGear Genomics)
About This Section
RefSeq DNA sequence:
NC_000002.11  NC_018913.1  NT_005403.17  
Regulatory elements:
   SABiosciences Regulatory transcription factor binding sites in the SLC39A10 gene promoter:
         FAC1   Sp1   HSF1short   HSF1 (long)   Lmo2   
         Other transcription factors

SwitchGear Promoter luciferase reporter plasmid: SLC39A10 promoter sequence
   Search SABiosciences Chromatin IP Primers for SLC39A10

Epigenetics:
QIAGEN PyroMark CpG Assay predesigned Pyrosequencing DNA Methylation assays in human, mouse, rat SLC39A10


Genomic Location:
Genomic View: UCSC Golden Path with GeneCards custom track

Entrez Gene cytogenetic band: 2q32.3   Ensembl cytogenetic band:  2q32.3   HGNC cytogenetic band: 2q33.1

SLC39A10 Gene in genomic location: bands according to Ensembl, locations according to (and/or Entrez Gene and/or Ensembl if different)
SLC39A10 gene location

GeneLoc information about chromosome 2         GeneLoc Exon Structure

GeneLoc location for GC02P196440:  view genomic region     (about GC identifiers)

Start:
 196,440,701 bp from pter      End:
 196,602,426 bp from pter
Size:
 161,726 bases      Orientation:
 plus strand

Proteins
for SLC39A10 gene

(According to 1UniProtKB, HORDE, neXtProt, Ensembl, and/or Reactome, Modification sites according to 2PhosphoSitePlus, Specific Peptides from DME, Protein expression images according to data from SPIRE MOPED and PaxDb, RefSeq according to NCBI, PDB rendering according to OCA and/or Proteopedia, Recombinant Proteins from EMD Millipore, R&D Systems, GenScript, Enzo Life Sciences, OriGene, Novus Biologicals, Sino Biological, ProSpec, and/or Uscn,
Biochemical Assays by EMD Millipore, R&D Systems, OriGene, GenScript, Cell Signaling Technology, Enzo Life Sciences, and/or Uscn, Ontologies according to Gene Ontology Consortium 01 Mar 2013 and Entrez Gene, Antibodies by EMD Millipore, R&D Systems, GenScript, Cell Signaling Technology, OriGene, Novus Biologicals, Thermo Fisher Scientific, Abcam, and/or Uscn)
About This Section
UniProtKB/Swiss-Prot: S39AA_HUMAN, Q9ULF5 (See protein sequence)
Recommended Name: Zinc transporter ZIP10 precursor  
Size: 831 amino acids; 94132 Da
Subcellular location: Membrane; Multi-pass membrane protein (Potential)
Miscellaneous: High levels of expression are correlated with invasiveness in several breast cancer lines
Sequence caution: Sequence=BAA86579.1; Type=Erroneous initiation; Sequence=CAB43393.1; Type=Miscellaneous discrepancy;
Note=Contaminating sequence. Potential poly-A sequence;
Secondary accessions: A8K5C6 Q3MJA4 Q68CR5 Q6DKH6 Q9Y3Z1

Explore the universe of human proteins at neXtProt for SLC39A10: NX_Q9ULF5

Post-translational modifications:

  • View modification sites using PhosphoSitePlus2
  • View neXtProt modification sites for NX_Q9ULF5

    • SLC39A10 Protein expression data from MOPED and PaxDb:    About this image 
    Estimated protein expression log10 (pmol).

    REFSEQ proteins (2 alternative transcripts): 
    NP_001120729.1  NP_065075.1  

    ENSEMBL proteins: 
     ENSP00000389640   ENSP00000386766   ENSP00000394469   ENSP00000352655   ENSP00000394995  
     ENSP00000406590   ENSP00000409272   ENSP00000437787  
    Reactome Protein details: Q9ULF5
    Human Recombinant Protein Products: 
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    Browse OriGene Protein Over-expression Lysates
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    Novus Biologicals SLC39A10 Proteins
    Browse Sino Biological Recombinant Proteins
    Browse ProSpec Recombinant Proteins
    Uscn Proteins for SLC39A10

    Gene Ontology (GO): 2 cellular component terms (GO ID links to tree view):    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0016020membrane ----
    GO:0016021integral to membrane IEA--


    SLC39A10 for ontologies           About GeneDecksing



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    Uscn ELISAs and CLIAs for SLC39A10

    Protein Domains /
    Families
    for SLC39A10 gene

    (According to InterPro, ProtoNet, UniProtKB, and/or BLOCKS, Sets of similar genes according to GeneDecks)
    About This Section
    SLC39A10 for domains           About GeneDecksing

    1 InterPro domain/family:
     IPR003689 ZIP

    Graphical View of Domain Structure for InterPro Entry Q9ULF5

    ProtoNet protein and cluster: Q9ULF5

    1 Blocks protein family: IPB003689 Zinc transporter ZIP

    UniProtKB/Swiss-Prot: S39AA_HUMAN, Q9ULF5
    Similarity: Belongs to the ZIP transporter (TC 2.A.5) family


    Function
    for SLC39A10 gene

    (According to 1UniProtKB, Genatlas, LifeMap Discovery™, IUBMB, and/or 2DME, Human phenotypes from GenomeRNAi, Animal models from MGI Mar 06 2013,
    bound targets from SABiosciences, miRNA Gene Targets from miRTarBase shRNA from OriGene, RNAi from EMD Millipore, siRNAs from OriGene, QIAGEN, microRNA from QIAGEN, Gene Editing from DNA2.0, Clones from EMD Millipore, OriGene, SwitchGear Genomics, GenScript, Sino Biological, DNA2.0, and Vector BioLabs, Cell Lines from GenScript, LifeMap BioReagents, In Situ Hybridization Assays from Advanced Cell Diagnostics, Ontologies according to Gene Ontology Consortium 01 Mar 2013 via Entrez Gene.)
    About This Section
    Function Summary:

         UniProtKB/Swiss-Prot: S39AA_HUMAN, Q9ULF5
    Function: May act as a zinc-influx transporter

    miRNA
    Products:            		miRTarBase miRNAs that target SLC39A10:
    hsa-mir-155 (MIRT005099)

    OriGene 3'-UTR Clone (see all 2): SLC39A10
    Browse MicroRNA Expression Plasmids
    QIAGEN Custom miScript Target Protector blocks miRNA-binding site of human, mouse, rat SLC39A10
    8/97 QIAGEN miScript miRNA Assays for microRNAs that regulate SLC39A10 (see all 97):
    hsa-miR-323-3p hsa-miR-300 hsa-miR-15a hsa-miR-199a-3p hsa-miR-128 hsa-miR-219-5p hsa-miR-30d hsa-miR-138-2*
    SwitchGear 3'UTR luciferase reporter plasmid: SLC39A10 3' UTR sequence
    Inhib. RNA
    Products:            		Browse for Gene Knock-down Tools from EMD Millipore
    OriGene 29mer shRNA kits in GFP-retroviral vector in human, mouse, rat for SLC39A10 (see all 7)
    OriGene shRNA RFP: SLC39A10
    OriGene siRNA: SLC39A10
    QIAGEN FlexiTube/FlexiPlate siRNA for gene silencing in human, mouse, rat SLC39A10

    Gene Editing
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    Clone
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    OriGene Myc/DDK tagged cDNA clones in CMV expression vector in human, mouse, rat for SLC39A10 (see all 3)
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    Browse Sino Biological Human cDNA Clones
    DNA2.0 Custom Codon Optimized Gene Synthesis Service for SLC39A10
    Vector BioLabs ready-to-use adenovirus/AAV for human, mouse, rat SLC39A10 

    Cell Line
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    Search LifeMap BioReagents cell lines for SLC39A10

    In Situ Assay
    Products:       
         		Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for SLC39A10

    Gene Ontology (GO): 1 molecular function term (GO ID links to tree view):    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0046873metal ion transmembrane transporter activity IEA--


    SLC39A10 for ontologies           About GeneDecksing



    Pathways & Interactions
    for SLC39A10 gene

    (Pathways according to EMD Millipore, R&D Systems, Cell Signaling Technology, KEGG, PharmGKB, BioSystems, Reactome, Tocris Bioscience, GeneGo (Thomson Reuters), QIAGEN, and/or UniProtKB, Sets of similar genes according to GeneDecks, Interaction Networks according to SABiosciences, and/or STRING, Interactions according to 1UniProtKB, 2MINT, 3I2D, and/or 4STRING, with links to IntAct and Ensembl, Ontologies according to Gene Ontology Consortium 01 Mar 2013 via Entrez Gene).
    About This Section

    Unified GeneCards pathways  About this table 
    See pathways by source

    Super-pathwaycontained gene-specific pathways
    1Zinc transporters
    		Zinc transporters1.00
    		Zinc influx into cells by the SLC39 gene family0.59
    		Metal ion SLC transporters0.68
    2SLC-mediated transmembrane transport
    		SLC-mediated transmembrane transport1.00
    		Transport of glucose and other sugars, bile salts and organic acids, metal ions and amine compounds0.38
    		Transmembrane transport of small molecules0.50

    Pathway sources
    See GeneCards unified pathways
    Show all pathways


    5/6        Reactome Pathways for SLC39A10 (see all 6)
        SLC-mediated transmembrane transport
    Transmembrane transport of small molecules
    Transport of glucose and other sugars, bile salts and organic acids, metal ions and amine compounds
    Metal ion SLC transporters
    Zinc transporters



    SLC39A10 for pathways           About GeneDecksing

    Interactions:

        Search SABiosciences Gene Network CentralTM Interacting Genes and Proteins Networks for SLC39A10

    STRING Interaction Network Preview (showing 2 interactants - click image to see more details)

    5 Interacting proteins for SLC39A10 (Q9ULF53 ENSP000003526554) via UniProtKB, MINT, STRING, and/or I2D
    InteractantInteraction Details
    GeneCardExternal ID(s)
    NAPGQ997473I2D: score=5 
    CLN3Q132863I2D: score=1 
    ETS1P149213I2D: score=1 
    UBCENSP000003448184STRING: ENSP00000344818
    ELAVL1ENSP000003852694STRING: ENSP00000385269
    About this table

    Gene Ontology (GO): 2 biological process terms (GO ID links to tree view):    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0006829zinc ion transport IEA--
    GO:0055085transmembrane transport TAS--


    SLC39A10 for ontologies           About GeneDecksing



    Drugs & Compounds
    for SLC39A10 gene

    (Chemical Compounds according to UniProtKB, Enzo Life Sciences, EMD Millipore, Tocris Bioscience HMDB, BitterDB, and/or Novoseek, and Drugs according to DrugBank, Enzo Life Sciences, and/or PharmGKB, with drugs/clinical trials/news search links to CenterWatch)
    About This Section
    Browse Small Molecules at EMD Millipore
    Browse drugs & compounds from Enzo Life Sciences

    Browse Tocris compounds for SLC39A10
    Search CenterWatch for drugs/clinical trials and news about SLC39A10 / S39AA 

    Transcripts
    for SLC39A10 gene

    (Secondary structures according to fRNAdb,
    GenBank/EMBL/DDBJ Accessions according to
    Unigene (Build 235 Homo sapiens; Mar 10 2013) or GenBank,
    RefSeq according to Entrez Gene,
    DOTS (version 10), and/or AceView, transcript ids from Ensembl with links to UCSC,
    exon structure from GeneLoc, alternative splicing isoforms according to ASD and/or ECgene,
    RNAi Products from EMD Millipore,
    siRNAs from OriGene, QIAGEN, shRNA from OriGene, microRNA from QIAGEN,
    Tagged/untagged cDNA clones from OriGene, SwitchGear Genomics, GenScript, DNA2.0, Vector BioLabs, Primers from OriGene, SABiosciences, and/or QIAGEN )
    About This Section
    REFSEQ mRNAs for SLC39A10 gene (2 alternative transcripts): 
    NM_001127257.1  NM_020342.2  

    Unigene Cluster for SLC39A10:

    Solute carrier family 39 (zinc transporter), member 10
    Hs.650158  [show with all ESTs]
    Unigene Representative Sequence: NM_001127257
    10 Ensembl transcripts including schematic representations, and UCSC links where relevant:
    ENST00000458054 ENST00000409086(uc002utg.4) ENST00000444421 ENST00000359634(uc002uth.4)
    ENST00000430412(uc010zgp.2) ENST00000412905 ENST00000464301 ENST00000418005
    ENST00000465851 ENST00000541054

    miRNA
    Products:             		 OriGene 3'-UTR Clone (see all 2): SLC39A10
    Browse OriGene MicroRNA Expression Plasmids
    QIAGEN Custom miScript Target Protector blocks miRNA-binding site of human, mouse, rat SLC39A10
    8/97 QIAGEN miScript miRNA Assays for microRNAs that regulate SLC39A10 (see all 97):
    hsa-miR-323-3p hsa-miR-300 hsa-miR-15a hsa-miR-199a-3p hsa-miR-128 hsa-miR-219-5p hsa-miR-30d hsa-miR-138-2*
    SwitchGear 3'UTR luciferase reporter plasmid: SLC39A10 3' UTR sequence
    Inhib. RNA
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    OriGene 29mer shRNA kits in GFP-retroviral vector in human, mouse, rat for SLC39A10 (see all 7)
    OriGene shRNA RFP: SLC39A10
    OriGene siRNA: SLC39A10
    QIAGEN FlexiTube/FlexiPlate siRNA for gene silencing in human, mouse, rat SLC39A10
    Clone
    Products:             		 OriGene Myc/DDK tagged cDNA clones in CMV expression vector in human, mouse, rat for SLC39A10 (see all 3)
    OriGene untagged cDNA clones in CMV expression vector in human, mouse, rat for SLC39A10 (see all 2)
    OriGene custom cloning services – gene synthesis, subcloning, mutagenesis, variant library, vector shuttling 
    GenScript: all cDNA clones in your preferred vector (see all 2): SLC39A10 (NM_020342)
    DNA2.0 Custom Codon Optimized Gene Synthesis Service for SLC39A10
    Vector BioLabs ready-to-use adenovirus/AAV for human, mouse, rat SLC39A10 
    Primer
    Products:            		 OriGene genome-wide validated SYBR primer pairs in human, mouse, rat for SLC39A10
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      QIAGEN QuantiTect SYBR Green Assays in human, mouse, rat SLC39A10
      QIAGEN QuantiFast Probe-based Assays in human, mouse, rat SLC39A10

    Additional cDNA sequence: 

    AB033091.1 AK074996.1 AK291241.1 AK294771.1 AL050294.1 BC010371.1 BC029413.1 BC047493.1 
    BC073909.1 BC101516.1 BC112223.1 CR749813.1 

    11 DOTS entries:

    DT.113693  DT.91753387  DT.121030412  DT.213677  DT.75184258  DT.121030387  DT.95260424  DT.99990819 
    DT.91753390  DT.95177423  DT.95275242 

    24/170 AceView cDNA sequences (see all 170):

    AA282932 AW874409 N99716 AA491292 AI580405 BX489404 BM556605 AL042656 
    AA191514 CR599732 AW872826 AV705100 H18696 AB033091 BI597376 BM904169 
    AA283096 AA371057 AA482159 BM997974 AW675337 BC047493 AI434736 AI580886 

    GeneLoc Exon Structure


    Expression
    for SLC39A10 gene

    (RNA expression data according to H-InvDB, NONCODE, miRBase, and RNAdb, Expression images according to data from BioGPS, Illumina Human BodyMap, and CGAP SAGE, Sets of similar genes according to GeneDecks, in vivo and in vitro expression data from LifeMap Discovery™, plus additional links to Genevestigator, and/or SOURCE, and/or BioGPS, and/or UniProtKB,
    PCR Arrays from SABiosciences, Primers from OriGene, SABiosciences, and/or QIAGEN, In Situ Hybridization Assays from Advanced Cell Diagnostics)
    About This Section

    SLC39A10 expression in normal human tissues (normalized intensities)
    See probesets specificity/sensitivity at GeneAnnot
    About this imageBioGPS
    CGAP TAG: GCCTCCTTAT

    Microarray
    RNAseq (Illumina Body Map)
    (100×FPKM)½
    SAGE (Serial Analysis of Gene Expression)
    About this image

    SLC39A10 expression in embryonic tissues and stem cells
    Expression by the Database of Embryonic development, Stem cell research, and Regenerative medicine    About this table
    1 LifeMap In Vivo Development Anatomical Compartment/Cell 
    Tissue Anatomical Compartment CellCategory (developmental path)
    OvaryOvigerous CordOvarian Somatic CellsOvary
    Expression: Positive    Negative     Selective marker
    Experimental details: Curated     Microarrays     In-situ hybridization
    Stem Cell Differentiation: 1 LifeMap Cell 
    NameCategory
    PureStem™ progenitor EN13 (Embryonic Progenitor Cell)

    See SLC39A10 Protein Expression from SPIRE MOPED and PaxDB
    Genevestigator expression for SLC39A10

    SOURCE GeneReport for Unigene cluster: Hs.650158
        SABiosciences Custom PCR Arrays for SLC39A10
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    In Situ
    Assay Products:     
         		Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for SLC39A10

    Orthologs
    for SLC39A10 gene

    (Orthologs according to 1,2HomoloGene (2older version, for species not in 1newer version), 3euGenes, 4SGD , 5MGI Mar 06 2013, with possible further links to Flybase and/or WormBase, and/or 6Ensembl pan taxonomic compara , Gene Trees according to Ensembl and TreeFam)
    About This Section
    This gene was present in the common ancestor of eukaryotes.

    Orthologs for SLC39A10 gene from 8/23 species (see all 23)    About this table
    Organism Taxonomic
    classification    		 Gene Description Human
    Similarity    		 Orthology
    Type    		 Details
    chicken
    (Gallus gallus)    		 Aves SLC39A101 solute carrier family 39 (zinc transporter), member 10 less 74.71(n)
    72(a)    		   429005  XM_426562.3  XP_426562.2 
    lizard
    (Anolis carolinensis)    		 Reptilia SLC39A106
    		 --
    		 65(a)
    		 1 ↔ 1
    		 GL343280.1(1106064-1135274)
    tropical clawed frog
    (Xenopus tropicalis)    		 Amphibia Str.90232 Transcribed sequence with weak similarity to protein pirT08684 (H.sapiens) T08684 hypothetical protein DKFZp564L2123.1 - human (fragment) less 82.45(n)    CF783212.1 
    zebrafish
    (Danio rerio)    		 Actinopterygii zgc635522 hypothetical protein MGC63552 73.55(n)   393644  BC058056.1 
    fruit fly
    (Drosophila melanogaster)    		 Insecta CG100061 CG10006 50.41(n)
    40.33(a)    		   39626  NM_001104138.2  NP_001097608.1 
    worm
    (Caenorhabditis elegans)    		 Secernentea tag-1416
    		 Temporarily Assigned Gene name family member (tag-...
    		 29(a)
    		 possible ortholog
    		 IV(17364965-17366454)
    thale cress
    (Arabidopsis thaliana)    		 eudicotyledons IAR16
    		 IAA-alanine resistance protein 1
    		 22(a)
    		 1 → many
    		 1(25521204-25524175)
    rice
    (Oryza sativa)    		 Liliopsida --
    		 metal cation transporter, putative, expressed
    		 20(a)
    		 1 → many
    		 8(22984381-22992760)


    ENSEMBL Gene Tree for SLC39A10 (if available)
    TreeFam Gene Tree for SLC39A10 (if available) 

    Paralogs
    for SLC39A10 gene

    (Paralogs according to 1HomoloGene,
    2Ensembl, and 3SIMAP, Pseudogenes according to 4Pseudogene.org Build 68)
    About This Section
    Paralogs for SLC39A10 gene
    SLC39A52  SLC39A82  SLC39A142  SLC39A42  SLC39A132  SLC39A122  SLC39A62  SLC39A72  
    2 SIMAP similar genes for SLC39A10 using alignment to 7 protein entries:     S39AA_HUMAN (see all proteins):
    SLC39A12    SLC39A6

    SLC39A10 for paralogs           About GeneDecksing



    Genomic Variants
    for SLC39A10 gene

    (SNPs/Variants according to the 1NCBI SNP Database, 2Ensembl, 3PupaSUITE, UniProtKB, and DNA2.0, Linkage Disequilibrium by HapMap, Structural Variations(CNVs/InDels/Inversions) from the Database of Genomic Variants, Mutations from the Human Gene Mutation Database (HGMD) and the Locus Specific Mutation Databases (LSDB), Blood group antigen gene mutations by BGMUT, Resequencing Primers from QIAGEN, Cancer Mutation PCR Arrays and Assays and Copy Number PCR Arrays from SABiosciences)
    About This Section

    10/1233 NCBI SNPs in SLC39A10 are shown (see all 1233)     About this table
    Genomic DataTranscription Related DataAllele Frequencies
    SNP IDValidClinical
    significance    		Chr 2 posSequence#AA
    Chg    		TypeMore#Allele
    freq    		PopTotal
    sample    		More
    ----------
    rs776895861,2
    		C,--188376471(+) AAACAC/TANNNN 1 -- int10--------
    rs1810294381,2
    		--196519596(+) TCAGTA/CGGAAA 1 -- us2k10--------
    rs1147768901,2
    		F,--196519602(+) GGAAAA/TGTAAT 1 -- us2k11Minor allele frequency- T:0.07WA 118
    rs614048651,2
    		C,--196519622(+) GCAGAT/-GAATC 1 -- us2k12Minor allele frequency- -:0.00NA CSA 4
    rs2010187801,2
    		C--196519623(+) GCAGAG/TANNNN 1 -- us2k10--------
    rs1153495221,2
    		F,--196519839(+) AGTGAC/TTAATA 1 -- us2k11Minor allele frequency- T:0.04WA 118
    rs1378960991,2
    		--196519940(+) TGGCAC/TAGGGG 2 -- us2k10--------
    rs1860152231,2
    		--196519954(+) GAAGCA/GTGGGG 2 -- us2k10--------
    rs1893413211,2
    		--196519974(+) TCAGAA/GTTGCA 2 -- us2k10--------
    rs9349111,2
    		C,A,H,--196520199(-) TCATAA/CTTATT 2 -- us2k112Minor allele frequency- C:0.00NA WA CSA 258

    HapMap Linkage Disequilibrium report for SLC39A10 (196440701 - 196602426 bp)
    Structural Variations (Copy Number Variations, Insertions/Deletions, Inversions)
    Database of Genomic Variants (DGV): 1 variation for SLC39A10
         1 CNV: 58951

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    Disorders / Diseases
    for SLC39A10 gene

    (in which this Gene is Involved, According to MalaCards, OMIM, UniProtKB, the University of Copenhagen DISEASES database, Genatlas, GeneTests, GAD, HuGE Navigator, and/or TGDB.)
    About This Section
    SLC39A10 for disorders           About GeneDecksing

    OMIM gene information: 608733    OMIM disorders: --

    2 diseases for SLC39A10:    About MalaCards
    breast cancer    prostatitis

    Human Genome Epidemiology (HuGE) Navigator: SLC39A10 (2 documents)

    Export disorders for SLC39A10 gene to outside databases

    Publications
    for SLC39A10 gene

    (in PubMed. Associations of this gene to articles via 1Entrez Gene, 2UniProtKB/Swiss-Prot, 3HGNC, 4GAD, 5PharmGKB, 6HMDB, 7DrugBank, 8UniProtKB/TrEMBL, 9 Novoseek, and/or 10fRNAdb)
    About This Section

    PubMed articles for SLC39A10 gene, integrated from 9 sources (see all 18):
    (articles sorted by number of sources associating them with SLC39A10)    		    Utopia: connect your pdf to the dynamic
    world of online information

    1. The LZT proteins; the LIV-1 subfamily of zinc transporters. (PubMed id 12659941)1, 3 Taylor K.M. and Nicholson R.I. (2003)
    2. Prediction of the coding sequences of unidentified human genes. XV. The complete sequences of 100 new cDNA clones from brain which code for large proteins in vitro. (PubMed id 10574462)1, 2 Nagase T.... Ohara O. (1999)
    3. A genome-wide meta-analysis of association studies of Cloninger's Temperament Scales. (PubMed id 22832960)1 Service S.K....Freimer N.B. (2012)
    4. A proteome-wide, quantitative survey of in vivo ubiqui tylation sites reveals widespread regulatory roles. (PubMed id 21890473)1 Wagner S.A....Choudhary C. (2011)
    5. Systematic and quantitative assessment of the ubiquiti n-modified proteome. (PubMed id 21906983)1 Kim W....Gygi S.P. (2011)
    6. System-wide temporal characterization of the proteome and phosphoproteome of human embryonic stem cell differentiation. (PubMed id 21406692)2 Rigbolt K.T....Blagoev B. (2011)
    7. Ubiquitin ligase substrate identification through qua ntitative proteomics at both the protein and peptide levels. (PubMed id 21987572)1 Lee K.A....Doedens J.R. (2011)
    8. Personalized smoking cessation: interactions between nicotine dose, dependence and quit-success genotype score. (PubMed id 20379614)1 Rose J.E....Uhl G.R. (2010)
    9. Ubiquitin-mediated proteolysis of HuR by heat shock. (PubMed id 19322201)1 Abdelmohsen K....Gorospe M. (2009)
    10. Kinase-selective enrichment enables quantitative phosphoproteomics of the kinome across the cell cycle. (PubMed id 18691976)2 Daub H.... Mann M. (2008)

    External Searches for SLC39A10 gene

    (in PubMed, OMIM, and NCBI Bookshelf)
    About This Section
     ANDOR
    Aliases
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      Query String
    		PubMed
    OMIM
    NCBI Bookshelf
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    Genome Databases showing SLC39A10 gene

    (According to Entrez Gene, HGNC, AceView, euGenes, Ensembl, miRBase, ECgene, Kegg, and/or H-InvDB)
    About This Section
    Entrez Gene: 57181 HGNC: 20861 AceView: SLC39A10 Ensembl:ENSG00000196950 euGenes: HUgn57181
    ECgene: SLC39A10 H-InvDB: SLC39A10

    Other Databases showing SLC39A10 gene

    (According to HUGE)
    About This Section
    HUGE: KIAA1265

    Specialized Databases showing SLC39A10 gene

    (According to PharmGKB, ATLAS, HORDE, IMGT, LEIDEN, UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL,
    Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot)
    About This Section
    NameDescription
    PharmGKB entry for SLC39A10 Pharmacogenomics, SNPs, Pathways

    Intellectual Property
    for SLC39A10 gene

    (Patent information from GeneIP,
    Licensable technologies from WIS Yeda, Salk, Tufts,
    IP news from LifeMap Sciences, Inc.)
    About This Section
    		Patent Information for SLC39A10 gene:
    Search GeneIP for patents involving SLC39A10

    GeneCards and IP:
    Japan Patent Office Licenses GeneCards     European Patent Office Licenses GeneCards     Improving the IP Search



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