Set Analyses:
GeneALaCart
GeneAnalytics
VarElect
Advanced Search

Advanced Search

 
Search By
Section (entire)
for


 


SLC38A9 Gene

protein-coding   GIFtS: 46
GCID: GC05M054958

Solute Carrier Family 38, Member 9

  Try our
MalaCards

disease database 

Aliases
for SLC38A9 gene

(According to 1HGNC, 2Entrez Gene,
3UniProtKB/Swiss-Prot, 4UniProtKB/TrEMBL, 5OMIM, 6GeneLoc, 7Ensembl, 8DME, 9miRBase, 10fRNAdb, 12H-InvDB, 13NCBI, 14NONCODE, and/or 15RNAdb)
About This Section

TryGeneCards Plus
This gene clusters with an RNA gene
Subcategory (RNA class): antisense

Quality score for the ORGUL clustered with this gene is 3

Aliases
Solute Carrier Family 38, Member 91 2
Solute Carrier Family 38 Member 92 3
Putative Sodium-Coupled Neutral Amino Acid Transporter 92

External Ids:    HGNC: 269071   Entrez Gene: 1531292   Ensembl: ENSG000001770587   UniProtKB: Q8NBW43   
ORGUL members:         

Export aliases for SLC38A9 gene to outside databases

Previous GC identifer: GC05M051895


Summaries
for SLC38A9 gene

(According to Entrez Gene, GeneCards, Tocris Bioscience, Wikipedia's Gene Wiki, PharmGKB,
UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL)
About This Section

TryGeneCards Plus
GeneCards Summary for SLC38A9 Gene:
SLC38A9 (solute carrier family 38, member 9) is a protein-coding gene.

UniProtKB/Swiss-Prot: S38A9_HUMAN, Q8NBW4
Function: Putative sodium-dependent amino acid/proton antiporter (By similarity)




Genomic Views
for SLC38A9 gene

(According to GeneLoc and/or HGNC, and/or
Entrez Gene (NCBI build 37),
and/or miRBase,
Genomic Views according to UCSC (hg19) and Ensembl (release 75), Regulatory elements and Epigenetics data according to QIAGEN, and/or SwitchGear Genomics)
About This Section

TryGeneCards Plus		 Regulatory elements:
   Regulatory transcription factor binding sites in the SLC38A9 gene promoter:
         AhR   COUP-TF1   COUP   FOXO3   HNF-4alpha2   HNF-4alpha1   FOXO3b   COUP-TF   NRF-2   FOXO3a   
         Other transcription factors

SwitchGear Promoter luciferase reporter plasmid: SLC38A9 promoter sequence
   Search Chromatin IP Primers for SLC38A9

Epigenetics:
DNA Methylation CpG Assay Predesigned for Pyrosequencing in human, mouse, rat SLC38A9


Genomic Location:
Genomic View: UCSC Golden Path with GeneCards custom track

Entrez Gene cytogenetic band: 5q11.2   Ensembl cytogenetic band:  5q11.2   HGNC cytogenetic band: 5q11.2

SLC38A9 Gene in genomic location: bands according to Ensembl, locations according to (and/or Entrez Gene and/or Ensembl if different)
SLC38A9 gene location

GeneLoc information about chromosome 5         GeneLoc Exon Structure

GeneLoc location for GC05M054958:  view genomic region     (about GC identifiers)

Start:
 54,921,673 bp from pter      End:
 55,069,022 bp from pter
Size:
 147,350 bases      Orientation:
 minus strand

Proteins
for SLC38A9 gene

(According to 1UniProtKB, HORDE, 2neXtProt, Ensembl, and/or Reactome, Modification sites according to PhosphoSitePlus, Specific Peptides from DME, RefSeq according to NCBI, PDB rendering according to OCA and/or Proteopedia, Recombinant Proteins from EMD Millipore, R&D Systems, GenScript, Enzo Life Sciences, OriGene, Novus Biologicals, Sino Biological, ProSpec, Cloud-Clone Corp., eBioscience, and/or antibodies-online,
Biochemical Assays by EMD Millipore, R&D Systems, OriGene, GenScript, Cell Signaling Technology, Enzo Life Sciences, Cloud-Clone Corp., eBioscience, and/or antibodies-online, Antibodies by EMD Millipore, R&D Systems, Cell Signaling Technology, OriGene, Novus Biologicals, Thermo Fisher Scientific, Abcam, Cloud-Clone Corp, antibodies-online, and/or others.)
About This Section

TryGeneCards Plus
UniProtKB/Swiss-Prot: S38A9_HUMAN, Q8NBW4 (See protein sequence)
Recommended Name: Putative sodium-coupled neutral amino acid transporter 9  
Size: 561 amino acids; 63776 Da
Secondary accessions: B3KXV1 B7Z7D0 Q0P5S0 Q6MZJ8
Alternative splicing: 4 isoforms:  Q8NBW4-1   Q8NBW4-2   Q8NBW4-3   Q8NBW4-4   (No experimental confirmation available)

Explore the universe of human proteins at neXtProt for SLC38A9: NX_Q8NBW4

Explore proteomics data for SLC38A9 at MOPED

Post-translational modifications: 

  • Ubiquitination2 at Lys37
  • Modification sites at PhosphoSitePlus

    • See SLC38A9 Protein Expression from SPIRE MOPED, PaxDB, and MaxQB

    REFSEQ proteins (4 alternative transcripts): 
    NP_001245215.1  NP_001245216.1  NP_001269358.1  NP_775785.2  

    ENSEMBL proteins: 
     ENSP00000427707   ENSP00000380074   ENSP00000420934   ENSP00000426925   ENSP00000427335  
     ENSP00000423219   ENSP00000426413   ENSP00000424918   ENSP00000425055   ENSP00000427624  
     ENSP00000422843   ENSP00000424271   ENSP00000425259   ENSP00000420950   ENSP00000425842  
     ENSP00000316596   ENSP00000397429   ENSP00000437771  

    SLC38A9 Human Recombinant Protein Products:

    Browse Purified and Recombinant Proteins at EMD Millipore
    Browse R&D Systems for human recombinant proteins
    Browse recombinant and purified proteins available from Enzo Life Sciences
    Browse OriGene full length recombinant human proteins expressed in human HEK293 cells
    Browse OriGene Protein Over-expression Lysates
    OriGene Custom MassSpec
    OriGene Custom Protein Services for SLC38A9
    GenScript Custom Purified and Recombinant Proteins Services for SLC38A9
    Browse Sino Biological Recombinant Proteins
    Browse Sino Biological Cell Lysates
    Browse ProSpec Recombinant Proteins
    Cloud-Clone Corp. Proteins for SLC38A9

         		 Search eBioscience for Proteins for SLC38A9 

         		 Search antibodies-online for proteins for SLC38A9 

         		 Search antibodies-online for peptides for SLC38A9

    SLC38A9 Antibody Products:

    Browse EMD Millipore's Extensive Line of Mono- and Polyclonal Antibodies
    Browse R&D Systems for Antibodies
    Browse OriGene Antibodies
    OriGene Custom Antibody Services for SLC38A9
    Novus Biologicals SLC38A9 Antibodies
    Abcam antibodies for SLC38A9
    Cloud-Clone Corp. Antibodies for SLC38A9
    Search ThermoFisher Antibodies for SLC38A9
    antibodies-online antibodies for SLC38A9 (2 products) 

    SLC38A9 Assay Products:

    Browse Kits and Assays available from EMD Millipore
    OriGene Custom Assay Services for SLC38A9
    Browse R&D Systems for biochemical assays
    GenScript Custom Assay Services for SLC38A9
    Browse Enzo Life Sciences for kits & assays
    Cloud-Clone Corp. ELISAs for SLC38A9
    Cloud-Clone Corp. CLIAs for SLC38A9
    Search eBioscience for ELISAs for SLC38A9 
    antibodies-online kits for SLC38A9 (6 products) 

    Domains /
    Families
    for SLC38A9 gene

    (According to HGNC, IUPHAR, InterPro, ProtoNet, UniProtKB, and/or BLOCKS, Sets of similar genes according to GeneDecks)
    About This Section

    TryGeneCards Plus    		 HGNC Gene Families:
    SLC: Solute carriers

    IUPHAR Guide to PHARMACOLOGY protein family classification: SLC38A9
    Orphan SLC38 transporters

    1 InterPro protein domain:
     IPR013057 AA_transpt_TM

    Graphical View of Domain Structure for InterPro Entry Q8NBW4

    ProtoNet protein and cluster: Q8NBW4

    UniProtKB/Swiss-Prot: S38A9_HUMAN, Q8NBW4
    Similarity: Belongs to the amino acid/polyamine transporter 2 family


    Find genes that share domains with SLC38A9           About GenesLikeMe


    Function
    for SLC38A9 gene

    (According to 1UniProtKB, Genatlas, LifeMap Discovery™, IUBMB, and/or 2DME, Human phenotypes from GenomeRNAi, Animal models from MGI Mar 06 2013, genOway,
    transcription factor targeting from QIAGEN and/or HOMER, miRNA Gene Targets from miRTarBase, shRNA from OriGene, siRNAs from OriGene, QIAGEN, microRNA from QIAGEN, SwitchGear Genomics, Gene Editing from DNA2.0, Clones from OriGene, GenScript, Sino Biological, DNA2.0, Vector BioLabs and/or Addgene, Cell Lines from GenScript, ESI BIO, In Situ Hybridization Assays from Advanced Cell Diagnostics, Flow cytometry from eBioscience, Ontologies according to Gene Ontology Consortium 01 Apr 2014 via Entrez Gene.)
    About This Section

    TryGeneCards Plus
    Molecular Function:

         UniProtKB/Swiss-Prot Summary: S38A9_HUMAN, Q8NBW4
    Function: Putative sodium-dependent amino acid/proton antiporter (By similarity)

    Phenotypes:
         2 GenomeRNAi human phenotypes for SLC38A9:

     G0/1 arrest  Increased G1 DNA content 

    Animal Models:
       genOway: Develop your customized and physiologically relevant rodent model for SLC38A9

    miRNA
    Products:            		Block miRNA regulation of human, mouse, rat SLC38A9 using miScript Target Protectors
    Selected qRT-PCR Assays for microRNAs that regulate SLC38A9 (see all 20):
    hsa-miR-125a-5p hsa-let-7d hsa-miR-4251 hsa-miR-202 hsa-miR-200a hsa-let-7c hsa-miR-141 hsa-let-7g
    SwitchGear 3'UTR luciferase reporter plasmid: SLC38A9 3' UTR sequence
    Inhib. RNA
    Products:            		OriGene RNAi products in human, mouse, rat for SLC38A9
    Predesigned siRNA for gene silencing in human, mouse, rat SLC38A9

    Gene Editing
    Products:    		DNA2.0 Custom Protein Engineering Service for SLC38A9

    Clone
    Products:             		 OriGene clones in human, mouse for SLC38A9 (see all 6)
    OriGene ORF clones in mouse, rat for SLC38A9
    OriGene custom cloning services - gene synthesis, subcloning, mutagenesis, variant library, vector shuttling
    GenScript: all cDNA clones in your preferred vector: SLC38A9 (NM_173514)
    Browse Sino Biological Human cDNA Clones
    DNA2.0 Custom Codon Optimized Gene Synthesis Service for SLC38A9
    Vector BioLabs ready-to-use adenovirus/AAV for human, mouse, rat SLC38A9

    Cell Line
    Products:             		GenScript Custom overexpressing Cell Line Services for SLC38A9
    Browse ESI BIO Cell Lines and PureStem Progenitors for SLC38A9 
    In Situ Assay
    Products:       
         		Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for SLC38A9


    Localization
    for SLC38A9 gene

    (According to UniProtKB, COMPARTMENTS Subcellular localization database, Ontologies according to Gene Ontology Consortium 01 Apr 2014 via Entrez Gene.)
    About This Section

    TryGeneCards Plus
    Subcellular locations from UniProtKB/Swiss-Prot
    S38A9_HUMAN, Q8NBW4: Membrane; Multi-pass membrane protein (Potential)
    Subcellular locations from COMPARTMENTS: 

    CompartmentConfidence
    plasma membrane3
    nucleus1

    Gene Ontology (GO): 1 cellular component term:    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0016021integral component of membrane IEA--

    Find genes that share ontologies with SLC38A9           About GenesLikeMe


    Pathways & Interactions
    for SLC38A9 gene

    (SuperPaths according to PathCards, Pathways according to R&D Systems, Cell Signaling Technology, KEGG, PharmGKB, BioSystems, Sino Biological, Reactome, Tocris Bioscience, GeneGo (Thomson Reuters), QIAGEN, and/or UniProtKB, Sets of similar genes according to GeneDecks, Interaction Networks according to QIAGEN, and/or STRING, Interactions according to 1UniProtKB, 2MINT, 3I2D, and/or 4STRING, with links to IntAct and Ensembl, Ontologies according to Gene Ontology Consortium 01 Apr 2014 via Entrez Gene).
    About This Section

    TryGeneCards Plus





        Custom Pathway & Disease-focused RT2 Profiler PCR Arrays for SLC38A9
    Interactions:

        Search GeneGlobe Interaction Network for SLC38A9

    Gene Ontology (GO): 2 biological process terms:    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0006814sodium ion transport IEA--
    GO:0006865amino acid transport IEA--

    Find genes that share ontologies with SLC38A9           About GenesLikeMe



    Drugs & Compounds
    for SLC38A9 gene

    (Chemical Compounds according to UniProtKB, Enzo Life Sciences, EMD Millipore, Tocris Bioscience, ApexBio, HMDB, BitterDB, and/or Novoseek, Ligands according to IUPHAR, and Drugs according to DrugBank, Enzo Life Sciences, and/or PharmGKB)
    About This Section

    TryGeneCards Plus
    Browse Small Molecules at EMD Millipore
       Browse drugs & compounds from Enzo Life Sciences
      Browse compounds at ApexBio 

    Browse Tocris compounds for SLC38A9 (S38A9)

    1 HMDB Compound for SLC38A9    About this table
    CompoundSynonyms CAS #PubMed Ids
    SodiumSodium (see all 2)7440-23-5--



    Transcripts
    for SLC38A9 gene

    (Secondary structures according to fRNAdb,
    GenBank/EMBL/DDBJ Accessions according to
    Unigene (Build 236 Homo sapiens; Apr 25 2013) or GenBank,
    RefSeq according to Entrez Gene,
    DOTS (version 10), and/or AceView, transcript ids from Ensembl with links to UCSC,
    exon structure from GeneLoc, alternative splicing isoforms according to ASD and/or ECgene,
    siRNAs from OriGene, QIAGEN, shRNA from OriGene, microRNA from QIAGEN, SwitchGear Genomics,
    Tagged/untagged cDNA clones from OriGene, GenScript, DNA2.0, Vector BioLabs, and/or Addgene, Primers from OriGene, and/or QIAGEN, Flow cytometry from eBioscience )
    About This Section

    TryGeneCards Plus
    REFSEQ mRNAs for SLC38A9 gene (4 alternative transcripts): 
    NM_001258286.1  NM_001258287.1  NM_001282429.1  NM_173514.3  

    Selected Ensembl transcripts including schematic representations, and UCSC links where relevant (see all 27):
    ENST00000515159 ENST00000505708(uc003jqe.2) ENST00000396865(uc003jqf.2 uc010ivy.2)
    ENST00000515629(uc003jqd.2 uc010ivx.2) ENST00000508124 ENST00000512595
    ENST00000511233 ENST00000515754 ENST00000524030 ENST00000512208 ENST00000524154
    ENST00000507447 ENST00000514806 ENST00000503817 ENST00000503891 ENST00000502247
    ENST00000513993 ENST00000505563
    miRNA
    Products:             		 Block miRNA regulation of human, mouse, rat SLC38A9 using miScript Target Protectors
    Selected qRT-PCR Assays for microRNAs that regulate SLC38A9 (see all 20):
    hsa-miR-125a-5p hsa-let-7d hsa-miR-4251 hsa-miR-202 hsa-miR-200a hsa-let-7c hsa-miR-141 hsa-let-7g
    SwitchGear 3'UTR luciferase reporter plasmid: SLC38A9 3' UTR sequence
    Inhib. RNA
    Products:             		OriGene RNAi products in human, mouse, rat for SLC38A9
    Predesigned siRNA for gene silencing in human, mouse, rat SLC38A9
    Clone
    Products:             		 OriGene clones in human, mouse for SLC38A9 (see all 6)
    OriGene ORF clones in mouse, rat for SLC38A9
    OriGene custom cloning services - gene synthesis, subcloning, mutagenesis, variant library, vector shuttling
    GenScript: all cDNA clones in your preferred vector: SLC38A9 (NM_173514)
    DNA2.0 Custom Codon Optimized Gene Synthesis Service for SLC38A9
    Vector BioLabs ready-to-use adenovirus/AAV for human, mouse, rat SLC38A9
    Primer
    Products:            		OriGene qSTAR qPCR primer pairs in human, mouse for SLC38A9
    Pre-validated RT2 qPCR Primer Assay in human, mouse, rat SLC38A9
      QuantiTect SYBR Green Assays in human, mouse, rat SLC38A9
      QuantiFast Probe-based Assays in human, mouse, rat SLC38A9

    Selected AceView cDNA sequences (see all 63):

    AW024248 BC036232 AK122957 AK127988 BU632379 AW026144 AA760716 AW449801 
    AI418728 CR608660 BX101969 AI149244 BC045589 BM128969 AV734387 AI142804 
    BM129265 CB988696 AK075190 BI464442 BG723739 AI580489 BI559772 BX641065 

    GeneLoc Exon Structure

    4 Alternative Splicing Database (ASD) splice patterns (SP) for SLC38A9    About this scheme

    ExUns: 1 ^ 2a · 2b ^ 3 ^ 4a · 4b ^ 5 ^ 6 ^ 7 ^ 8 ^ 9 ^ 10 ^ 11
    SP1:        -     -     -     -                                                   
    SP2:                                                                              
    SP3:                                                                              
    SP4:                    -     -                                                   


    ECgene alternative splicing isoforms for SLC38A9

    Expression
    for SLC38A9 gene

    (RNA expression data according to H-InvDB, NONCODE, miRBase, and RNAdb, Expression images according to data from BioGPS, Illumina Human BodyMap, and CGAP SAGE, Sets of similar genes according to GeneDecks, in vivo and in vitro expression data from LifeMap Discovery™, Protein expression images according to data from SPIRE 1MOPED, 2PaxDb, and 3MaxQB, plus additional links to SOURCE, and/or BioGPS, and/or UniProtKB,
    PCR Arrays from QIAGEN, Primers from OriGene, and/or QIAGEN, In Situ Hybridization Assays from Advanced Cell Diagnostics)
    About This Section

    TryGeneCards Plus

    SLC38A9 expression in normal human tissues (normalized intensities)
    See probesets specificity/sensitivity at GeneAnnot
    About this imageBioGPS <intensity>2/3
    CGAP TAG: --
    SLC38A9 Expression
    About this image


    SLC38A9 expression in embryonic tissues and stem cells    About this table
    Data from LifeMap, the Embryonic Development and Stem Cells Database
     selected tissues (see all 3) fully expand
     
     Neurons
             nGnG Amacrine Cells Inner Nuclear Layer
     
     Eye (Sensory Organs)
             nGnG Amacrine Cells Inner Nuclear Layer
     
     Placenta (Extraembryonic Tissues)
    SLC38A9 Protein expression data from MOPED1, PaxDb2 and MaxQB3:     About this image

    SLC38A9 Protein Expression
        Custom PCR Arrays for SLC38A9
    Primer
    Products:    		OriGene qSTAR qPCR primer pairs in human, mouse for SLC38A9
    Pre-validated RT2 qPCR Primer Assay in human, mouse, rat SLC38A9
    QuantiTect SYBR Green Assays in human, mouse, rat SLC38A9
    QuantiFast Probe-based Assays in human, mouse, rat SLC38A9
    In Situ
    Assay Products:     
         		Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for SLC38A9

    Orthologs
    for SLC38A9 gene

    (Orthologs according to 1,2HomoloGene (2older version, for species not in 1newer version), 3euGenes, 4SGD , 5MGI Mar 06 2013, with possible further links to Flybase and/or WormBase, and/or 6Ensembl pan taxonomic compara , Gene Trees according to Ensembl and TreeFam)
    About This Section

    TryGeneCards Plus
    This gene was present in the common ancestor of animals.

    Orthologs for SLC38A9 gene from Selected species (see all 15)    About this table
    Organism Taxonomic
    classification    		 Gene Description Human
    Similarity    		 Orthology
    Type    		 Details
    mouse
    (Mus musculus)    		 Mammalia Slc38a91 , 5 solute carrier family 38, member 91, 5 89.11(n)1
    91.43(a)1    		   13 (63.93 cM)5
    2687061  NM_178746.41  NP_848861.11 
     1126607665 
    chicken
    (Gallus gallus)    		 Aves SLC38A91 solute carrier family 38, member 9 72.7(n)
    72.94(a)    		   427139  XM_004937242.1  XP_004937299.1 
    lizard
    (Anolis carolinensis)    		 Reptilia SLC38A96
    		 solute carrier family 38, member 9
    		 73(a)
    		 1 ↔ 1
    		 2(2372359-2426039)
    African clawed frog
    (Xenopus laevis)    		 Amphibia Xl.28832 Xenopus laevis transcribed sequence with weak similarity more 76.7(n)    BU906885.1 
    zebrafish
    (Danio rerio)    		 Actinopterygii slc38a91 solute carrier family 38, member 9 65.53(n)
    65.4(a)    		   562137  NM_001079999.1  NP_001073468.1 
    worm
    (Caenorhabditis elegans)    		 Secernentea F13H10.31 F13H10.3 51.13(n)
    43.92(a)    		   177997  NM_001083211.2  NP_001076680.1 


    ENSEMBL Gene Tree for SLC38A9 (if available)
    TreeFam Gene Tree for SLC38A9 (if available)

    Paralogs
    for SLC38A9 gene

    (Paralogs according to 1HomoloGene,
    2Ensembl, and 3SIMAP, Pseudogenes according to 4Pseudogene.org Build 68)
    About This Section

    TryGeneCards Plus
    Paralogs for SLC38A9 gene
    1 SIMAP similar gene for SLC38A9 using alignment to 12 protein entries:     S38A9_HUMAN (see all proteins):
    FLJ90709

    Find genes that share paralogs with SLC38A9           About GenesLikeMe



    Genomic Variants
    for SLC38A9 gene

    (SNPs/Variants according to the 1NCBI SNP Database, 2Ensembl, 3PupaSUITE, 4UniProtKB, and DNA2.0, Linkage Disequilibrium by HapMap, Structural Variations(CNVs/InDels/Inversions) from the Database of Genomic Variants, Mutations from the Human Gene Mutation Database (HGMD), the Human Cytochrome P450 Allele Nomenclature Database, and the Locus Specific Mutation Databases (LSDB), Blood group antigen gene mutations by BGMUT, Resequencing Primers, Cancer Mutation PCR Arrays and Assays, and Copy Number PCR Arrays from QIAGEN)
    About This Section

    TryGeneCards Plus
    Selected SNPs for SLC38A9 (see all 2026)    About this table                                 

    Genomic DataTranscription Related DataAllele Frequencies
    SNP IDValidClinical
    significance    		Chr 5 posSequence#AA
    Chg    		TypeMore#Allele
    freq    		PopTotal
    sample    		More
    ----------
    rs58679981,2
    		C--51966715(+) TAGTG-/A/AA  
                AAAAA     		2 -- int10--------
    rs351237601,2
    		C--51971323(+) TTTTT-/TGAGAC 2 -- int10--------
    rs1875051301,2
    		--54921202(+) AACTTC/GCTTTC 5 -- int10--------
    rs1918380361,2
    		--54921222(+) TGTGGA/GCCTGC 5 -- int10--------
    rs1506301101,2
    		--54921245(+) CTTGCA/GCAAGA 5 -- int10--------
    rs1147846591,2
    		C,F--54921256(+) TCCAAG/CAACCT 5 -- int11Minor allele frequency- C:0.03WA 118
    rs1828796111,2
    		--54921269(+) TCTCAA/CGGTCT 5 -- int10--------
    rs1388035211,2
    		--54921286(+) GGACCA/CCTTTC 5 -- int10--------
    rs1409808291,2
    		C--54921370(+) AATCC-/TTTTTT 5 -- int10--------
    rs1874249601,2
    		--54921405(+) CCAGAA/GGACAC 5 -- int10--------

    HapMap Linkage Disequilibrium report for SLC38A9 (54921673 - 55069022 bp)

    Structural Variations
         Database of Genomic Variants (DGV) Selected variations for SLC38A9 (see all 11):    About this table    
    Variant IDTypeSubtypePubMed ID
    nsv507253CNV Insertion20534489
    nsv507254CNV Insertion20534489
    nsv881699CNV Loss21882294
    dgv6074n71CNV Loss21882294
    dgv6070n71CNV Loss21882294
    nsv830305CNV Loss17160897
    dgv6073n71CNV Loss21882294
    nsv329478CNV Loss16902084
    nsv830306CNV Gain17160897
    nsv830304CNV Gain+Loss17160897

    Site Specific Mutation Identification with PCR Assays
    SeqTarget long-range PCR primers for resequencing SLC38A9
    DNA2.0 Custom Variant and Variant Library Synthesis for SLC38A9

    Disorders / Diseases
    for SLC38A9 gene

    (in which this Gene is Involved, According to MalaCards, OMIM, UniProtKB, the University of Copenhagen DISEASES database, Genatlas, GeneTests, GAD, HuGE Navigator, and/or TGDB.)
    About This Section

    TryGeneCards Plus
    Find genes that share disorders with SLC38A9           About GenesLikeMe

    Genetic Association Database (GAD): SLC38A9

    Export disorders for SLC38A9 gene to outside databases

    Publications
    for SLC38A9 gene

    (in PubMed. Associations of this gene to articles via 1Entrez Gene, 2UniProtKB/Swiss-Prot, 3HGNC, 4GAD, 5PharmGKB, 6HMDB, 7DrugBank, 8UniProtKB/TrEMBL, 9 Novoseek, and/or 10fRNAdb)
    About This Section

    TryGeneCards Plus
    PubMed articles for SLC38A9 gene integrated from 10 sources:
    (articles sorted by number of sources associating them with SLC38A9)    		    Utopia: connect your pdf to the dynamic
    world of online information

    1. Hundreds of variants clustered in genomic loci and biological pathways affect human height. (PubMed id 20881960)1, 4 Lango Allen H....Hirschhorn J.N. (Nature 2010)
    2. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PubMed id 14702039)1, 2 Ota T.... Sugano S. (Nat. Genet. 2004)
    3. Microarray-based detection and expression analysis of ABC and SLC transporters in drug-resistant ovarian cancer cell lines. (PubMed id 23462296)1 Januchowski R....Zabel M. (amp 2013)
    4. A quantitative atlas of mitotic phosphorylation. (PubMed id 18669648)2 Dephoure N.... Gygi S.P. (Proc. Natl. Acad. Sci. U.S.A. 2008)
    5. The full-ORF clone resource of the German cDNA consortium. (PubMed id 17974005)2 Bechtel S.... Schupp I. (BMC Genomics 2007)
    6. Signal sequence and keyword trap in silico for selection of full- length human cDNAs encoding secretion or membrane proteins from oligo- capped cDNA libraries. (PubMed id 16303743)1 Otsuki T....Isogai T. (DNA Res. 2005)
    7. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PubMed id 15489334)2 Gerhard D.S.... Malek J. (Genome Res. 2004)
    8. The DNA sequence and comparative analysis of human chromosome 5. (PubMed id 15372022)2 Schmutz J.... Rubin E.M. (Nature 2004)
    9. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PubMed id 12477932)1 Strausberg R.L....Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002)

    External Searches for SLC38A9 gene

    (in PubMed, OMIM, and NCBI Bookshelf)
    About This Section

    TryGeneCards Plus
     ANDOR
    Aliases
    Free Text  
      Query String
    		PubMed
    OMIM
    NCBI Bookshelf
      (Note: In FireFox, select the above section and copy using Ctrl-C)

    Genome Databases showing SLC38A9 gene

    (According to Entrez Gene, HGNC, AceView, euGenes, Ensembl, miRBase, ECgene, Kegg, and/or H-InvDB)
    About This Section

    TryGeneCards Plus
    Entrez Gene: 153129 HGNC: 26907 AceView: FLJ90709 Ensembl:ENSG00000177058 euGenes: HUgn153129
    ECgene: SLC38A9 H-InvDB: SLC38A9

    Other Databases showing SLC38A9 gene

    (According to HUGE)
    About This Section

    TryGeneCards Plus    		   --

    Specialized Databases showing SLC38A9 gene

    (According to PharmGKB, ATLAS, HORDE, IMGT, LEIDEN, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL, and/or others, e.g. Wikipedia and GeneReviews, via UniProtKB/Swiss-Prot)
    About This Section

    TryGeneCards Plus
    NameDescription
    PharmGKB entry for SLC38A9 Pharmacogenomics, SNPs, Pathways

    Intellectual Property
    for SLC38A9 gene

    (Patent information from GeneIP,
    Licensable technologies from WIS Yeda, Salk, Tufts,
    IP news from LifeMap Sciences, Inc.)
    About This Section

    TryGeneCards Plus    		Patent Information for SLC38A9 gene:
    Search GeneIP for patents involving SLC38A9

    GeneCards and IP:
    Japan Patent Office Licenses GeneCards     European Patent Office Licenses GeneCards     Improving the IP Search



    Products
    for SLC38A9 gene

    (Antibodies, recombinant proteins, and assays from EMD Millipore, R&D Systems, OriGene, QIAGEN, GenScript, Cell Signaling Technology, Novus Biologicals, Sino Biological, Enzo Life Sciences, Abcam, ProSpec, Cloud-Clone Corp., Thermo Fisher Scientific, eBioscience, antibodies-online, and/or others, Gene Editing from DNA2.0. Clones from OriGene, GenScript, Sino Biological, DNA2.0, SwitchGear Genomics, Vector BioLabs, Addgene, Cell lines from GenScript, and ESI BIO, Flow cytometery from eBioscience, PCR Arrays from QIAGEN, Drugs and/or compounds from EMD Millipore, Tocris Bioscience, Enzo Life Sciences, and/or ApexBio, In Situ Hybridization Assays from
    Advanced Cell Diagnostics, Animal models from genOway)
    About This Section

    TryGeneCards Plus
     
     EMD Millipore genomic analysis products

      
     Browse Antibodies   Browse Cell Culture Products  
     Browse ELISAs   Browse Flow Cytometry Kits  
     Browse Primer Pairs   Browse Enzyme Activity Assays/Reagents  
     Browse ELISpot/FluoroSpot Kits/Development Modules   Browse TFB/Immunoprecipitation Assays  
     Browse Apoptosis Detection Kits/Reagents   Browse Ubiquitin Proteasome Pathway (UPP) Assay Kits/Reagents  
     Browse DNA Damage/Repair Kits/Reagents   Browse Luminex Assays  
     Browse Cell Selection/Detection Kits/Reagents   Browse Secondary Antibodies/Controls/Staining Reagents  
     Browse Recombinant/Natural Proteins   Browse Stem Cell Products  
     Browse cDNA Clones   Browse Proteome Profiler Antibody Arrays  
     Browse OriGene Antibodies   OriGene RNAi products in human, mouse, rat for SLC38A9  
     Browse OriGene qPCR primer pairs and template standards   Browse OriGene Protein Over-expression Lysates  
     OriGene Custom Mass Spec   OriGene clones in human, mouse for SLC38A9  
     OriGene qSTAR qPCR primer pairs in human, mouse for SLC38A9   Browse OriGene full length recombinant human proteins expressed in human HEK293 cells  
     OriGene ORF clones in mouse, rat for SLC38A9   OriGene custom cloning services - gene synthesis, subcloning, mutagenesis, variant library, vector shuttling  
     OriGene Custom Antibody Services for SLC38A9   OriGene Custom Protein Services for SLC38A9  

         		 
     Block miRNA regulation of human, mouse, rat SLC38A9 using miScript Target Protectors SeqTarget long-range PCR primers for resequencing SLC38A9
     DNA Methylation CpG Assay Predesigned for Pyrosequencing in human, mouse, rat SLC38A9 Predesigned siRNA for gene silencing in human, mouse, rat SLC38A9
     QuantiFast Probe-based Assays in human, mouse, rat SLC38A9 QuantiTect SYBR Green Assays in human, mouse, rat SLC38A9
     Custom PCR Arrays for SLC38A9 Search Chromatin IP Primers for SLC38A9
     Pre-validated RT2 qPCR Primer Assay in human, mouse, rat SLC38A9  Search GeneGlobe Interaction Network for SLC38A9
     Regulatory tfbs in SLC38A9 promoter
     GenScript Custom Purified and Recombinant Proteins Services for SLC38A9 GenScript cDNA clones with any tag delivered in your preferred vector for SLC38A9
     GenScript Custom Assay Services for SLC38A9 GenScript Custom overexpressing Cell Line Services for SLC38A9
     CloneReady with Over 120,000 Genes  Gene Synthesis: Any Gene in Any Vector
     Vector-based siRNA and miRNA, Ready for Transfection Gene Mutant Library, Variants up to 10^11
     Plasmid Preparation Custom Peptide Services
     Search for Antibodies & Assays

     Search Tocris compounds for SLC38A9 (S38A9)
     Browse Sino Biological Proteins
     Browse Sino Biological Cell Lysates
     Browse Sino Biological cDNA Clones
     4000+ Proteins
     Search Sino Biological for antibodies, proteins & pathways
     Protein Production Services
     Transfection Reagents
     Protein A/G/L resins
     Isotyping reagents
     Search www.enzolifesciences.com for proteins, assays, substrates, inhibitors & antibodies

     Novus Tissue Slides
     SLC38A9 antibodies
     Antibodies for SLC38A9
     See all of Abcam's Antibodies, Kits and Proteins for SLC38A9
     Custom Antibody / Protein Production Service
     Bulk Purchasing
     Advantages of Rabbit Monoclonal antibodies
     Abcam protocols and scientific support
     Browse ProSpec Recombinant Proteins
     Proteins for SLC38A9
     Antibodies for SLC38A9
     ELISAs for SLC38A9
     CLIAs for SLC38A9



     Browse ESI BIO Cell Lines and PureStem Progenitors for SLC38A9
     Gene Synthesis
     Protein Engineering
     Variant Library Synthesis
     Codon Optimization
     Protein Production and Purification
     Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for SLC38A9
     SwitchGear 3'UTR luciferase reporter plasmids for SLC38A9
     SwitchGear Promoter luciferase reporter plasmids for SLC38A9
     Search ThermoFisher Antibodies for SLC38A9
     Vector BioLabs ready-to-use adenovirus/AAV for human, mouse, rat SLC38A9
     Browse compounds at ApexBio
     Search Addgene for plasmids for SLC38A9
      Search eBioscience for proteins for SLC38A9
      Search eBioscience for elisas for SLC38A9
      eBioscience FlowRNA Probe Sets
     genOway: Develop your customized and physiologically relevant rodent model for SLC38A9
     antibodies-online antibodies for SLC38A9 (2 products)
     antibodies-online kits for SLC38A9 (6 products)
      Search antibodies-online for peptides for SLC38A9
      Search antibodies-online for proteins for SLC38A9
           
    GeneCards Homepage - Last full update: 7 May 2014 - Incrementals: 9 May 2014 , 2 Jun 2014 , 26 Jun 2014 , 30 Jun 2014 , 21 Aug 2014 , 8 Sep 2014 , 2 Nov 2014 , 8 Jan 2015

    View Random Gene

    Category
    (GIFtS: )
    GIFtS Group
    The GeneCards human gene database gene index: 1 3 5 A B C D E F G H I J K L M N O P Q R S T U V W X Y Z 

    Developed at the Crown Human Genome Center, Department of Molecular Genetics, the Weizmann Institute of Science

    Copyright © 1996-2015 , Weizmann Institute of Science. All Rights Reserved.
    Hot genes      Disease genes      SLC38A9 gene at Home site.
    Version: 3.12.304 29 Jan 2015
    hostname: 356980-web2.xennexinc.com index build: 128 solr: 1.4