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Aliases for SLC37A3 Gene

Aliases for SLC37A3 Gene

  • Solute Carrier Family 37 Member 3 2 3 4 5
  • Solute Carrier Family 37, Member 3 2
  • SPX3 4

External Ids for SLC37A3 Gene

Previous GeneCards Identifiers for SLC37A3 Gene

  • GC07M138305
  • GC07M139363
  • GC07M139440
  • GC07M139486
  • GC07M139680
  • GC07M139993
  • GC07M134326

Summaries for SLC37A3 Gene

GeneCards Summary for SLC37A3 Gene

SLC37A3 (Solute Carrier Family 37 Member 3) is a Protein Coding gene. GO annotations related to this gene include transporter activity and transmembrane transporter activity. An important paralog of this gene is SLC37A1.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for SLC37A3 Gene

Genomics for SLC37A3 Gene

Regulatory Elements for SLC37A3 Gene

Enhancers for SLC37A3 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH07F140348 1 Ensembl ENCODE 19.4 +55.1 55110 2.2 MLX ARID4B DMAP1 ZNF48 YY1 SLC30A9 SP5 NFYC MXD4 MIER2 SLC37A3 RNA5SP247 PARP12 KDM7A RNU6-797P LOC105375534
GH07F140325 1 Ensembl ENCODE 11.5 +78.1 78133 1.0 ARNT MLX ARID4B RAD21 GATA2 MIXL1 SMARCA5 ZNF654 ZBTB2 MXD4 KDM7A RNA5SP247 SLC37A3 RNU6-797P LOC105375534
GH07F140343 0.6 ENCODE 11.4 +61.1 61148 0.1 CTCF TFAP4 ZNF654 SMC3 SMAD4 ZBTB7A RAD21 KDM7A RNA5SP247 SLC37A3 LOC105375534
GH07F140403 0.2 ENCODE 10.2 +0.2 155 1.2 ETS1 E2F1 ZNF316 POLR2A ZNF366 SCRT2 ZNF143 PRDM10 ZNF600 THAP11 SLC37A3 RAB19
GH07F140397 0.2 ENCODE 10.1 +6.2 6218 1.8 PKNOX1 CREB3L1 SIN3A ARID4B DMAP1 ZNF143 KLF13 SP3 MXD4 REST SLC37A3 RAB19 RNA5SP248
- Elite enhancer/Elite enhancer-gene association Download Table
Download GeneHancer data dump

Enhancers around SLC37A3 on UCSC Golden Path with GeneCards custom track

Promoters for SLC37A3 Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters
ENSR00000314132 333 1001 ETS1 E2F1 ZNF316 POLR2A ZNF366 SCRT2 ZNF143 PRDM10 ZNF600 THAP11

Genomic Location for SLC37A3 Gene

Chromosome:
7
Start:
140,293,693 bp from pter
End:
140,404,433 bp from pter
Size:
110,741 bases
Orientation:
Minus strand

Genomic View for SLC37A3 Gene

Genes around SLC37A3 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
SLC37A3 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for SLC37A3 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for SLC37A3 Gene

Proteins for SLC37A3 Gene

  • Protein details for SLC37A3 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Q8NCC5-SPX3_HUMAN
    Recommended name:
    Sugar phosphate exchanger 3
    Protein Accession:
    Q8NCC5
    Secondary Accessions:
    • Q6PIU7
    • Q86SS4
    • Q9BQG7

    Protein attributes for SLC37A3 Gene

    Size:
    494 amino acids
    Molecular mass:
    54486 Da
    Quaternary structure:
    No Data Available

    Alternative splice isoforms for SLC37A3 Gene

    UniProtKB/Swiss-Prot:

neXtProt entry for SLC37A3 Gene

Post-translational modifications for SLC37A3 Gene

  • Glycosylation at Asn 58 and Asn 266

No data available for DME Specific Peptides for SLC37A3 Gene

Domains & Families for SLC37A3 Gene

Gene Families for SLC37A3 Gene

Protein Domains for SLC37A3 Gene

Graphical View of Domain Structure for InterPro Entry

Q8NCC5

UniProtKB/Swiss-Prot:

SPX3_HUMAN :
  • Belongs to the major facilitator superfamily. Organophosphate:Pi antiporter (OPA) (TC 2.A.1.4) family.
Family:
  • Belongs to the major facilitator superfamily. Organophosphate:Pi antiporter (OPA) (TC 2.A.1.4) family.
genes like me logo Genes that share domains with SLC37A3: view

Function for SLC37A3 Gene

Gene Ontology (GO) - Molecular Function for SLC37A3 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0022857 transmembrane transporter activity IBA --
GO:0061513 NOT glucose 6-phosphate:inorganic phosphate antiporter activity IDA 21949678
genes like me logo Genes that share ontologies with SLC37A3: view
genes like me logo Genes that share phenotypes with SLC37A3: view

Animal Model Products

  • Taconic Biosciences Mouse Models for SLC37A3

Inhibitory RNA Products

Flow Cytometry Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Human Phenotype Ontology , Animal Models , Transcription Factor Targets and HOMER Transcription for SLC37A3 Gene

Localization for SLC37A3 Gene

Subcellular locations from UniProtKB/Swiss-Prot for SLC37A3 Gene

Endoplasmic reticulum membrane; Multi-pass membrane protein.

Subcellular locations from

COMPARTMENTS
Jensen Localization Image for SLC37A3 Gene COMPARTMENTS Subcellular localization image for SLC37A3 gene
Compartment Confidence
plasma membrane 3
cytosol 2
endoplasmic reticulum 1
golgi apparatus 1

Gene Ontology (GO) - Cellular Components for SLC37A3 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005737 cytoplasm IDA --
GO:0005783 endoplasmic reticulum IEA --
GO:0005789 endoplasmic reticulum membrane IEA --
GO:0016020 membrane IEA --
GO:0016021 integral component of membrane IEA --
genes like me logo Genes that share ontologies with SLC37A3: view

Pathways & Interactions for SLC37A3 Gene

SuperPathways for SLC37A3 Gene

No Data Available

Interacting Proteins for SLC37A3 Gene

Gene Ontology (GO) - Biological Process for SLC37A3 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0006810 transport IEA --
GO:0006820 anion transport IBA --
GO:0008643 carbohydrate transport IEA --
GO:0015760 NOT glucose-6-phosphate transport IDA 21949678
GO:0035435 NOT phosphate ion transmembrane transport IDA 21949678
genes like me logo Genes that share ontologies with SLC37A3: view

No data available for Pathways by source and SIGNOR curated interactions for SLC37A3 Gene

Transcripts for SLC37A3 Gene

Unigene Clusters for SLC37A3 Gene

Solute carrier family 37 (glycerol-3-phosphate transporter), member 3:
Representative Sequences:

Inhibitory RNA Products

Flow Cytometry Products

Alternative Splicing Database (ASD) splice patterns (SP) for SLC37A3 Gene

ExUns: 1a · 1b ^ 2 ^ 3 ^ 4 ^ 5 ^ 6 ^ 7 ^ 8a · 8b ^ 9a · 9b · 9c · 9d ^ 10 ^ 11a · 11b ^ 12 ^ 13a · 13b · 13c ^ 14 ^ 15 ^ 16a · 16b · 16c ·
SP1: - -
SP2: - - -
SP3: - - - - -
SP4: - - - - - -
SP5: - -
SP6:
SP7: - - - - - - -
SP8:
SP9: - -

ExUns: 16d
SP1:
SP2:
SP3:
SP4:
SP5:
SP6:
SP7:
SP8:
SP9:

Relevant External Links for SLC37A3 Gene

GeneLoc Exon Structure for
SLC37A3
ECgene alternative splicing isoforms for
SLC37A3

Expression for SLC37A3 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for SLC37A3 Gene

Integrated Proteomics: protein expression in normal tissues and cell lines from ProteomicsDB, PaxDb, and MOPED for SLC37A3 Gene



NURSA nuclear receptor signaling pathways regulating expression of SLC37A3 Gene:

SLC37A3

SOURCE GeneReport for Unigene cluster for SLC37A3 Gene:

Hs.446021

mRNA Expression by UniProt/SwissProt for SLC37A3 Gene:

Q8NCC5-SPX3_HUMAN
Tissue specificity: Expressed in liver, kidney, intestine and pancreas.
genes like me logo Genes that share expression patterns with SLC37A3: view

Primer Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues and Protein tissue co-expression partners for SLC37A3 Gene

Orthologs for SLC37A3 Gene

This gene was present in the common ancestor of animals.

Orthologs for SLC37A3 Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia SLC37A3 34 35
  • 99.66 (n)
dog
(Canis familiaris)
Mammalia SLC37A3 34 35
  • 89.41 (n)
cow
(Bos Taurus)
Mammalia SLC37A3 34 35
  • 88.19 (n)
mouse
(Mus musculus)
Mammalia Slc37a3 34 16 35
  • 86.17 (n)
rat
(Rattus norvegicus)
Mammalia Slc37a3 34
  • 85.43 (n)
oppossum
(Monodelphis domestica)
Mammalia SLC37A3 35
  • 82 (a)
OneToOne
platypus
(Ornithorhynchus anatinus)
Mammalia SLC37A3 35
  • 82 (a)
OneToOne
chicken
(Gallus gallus)
Aves SLC37A3 34 35
  • 75.26 (n)
lizard
(Anolis carolinensis)
Reptilia SLC37A3 35
  • 71 (a)
OneToOne
tropical clawed frog
(Silurana tropicalis)
Amphibia slc37a3 34
  • 67.84 (n)
zebrafish
(Danio rerio)
Actinopterygii SLC37A3 35
  • 67 (a)
OneToOne
LOC100331554 34
  • 66.67 (n)
worm
(Caenorhabditis elegans)
Secernentea T11G6.2 34 35
  • 53.18 (n)
T11G6.3 35
  • 42 (a)
OneToMany
T10C6.6 35
  • 41 (a)
OneToMany
T11G6.4 35
  • 41 (a)
OneToMany
sea squirt
(Ciona savignyi)
Ascidiacea -- 35
  • 43 (a)
OneToOne
Species where no ortholog for SLC37A3 was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rainbow trout (Oncorhynchus mykiss)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • wheat (Triticum aestivum)

Evolution for SLC37A3 Gene

ENSEMBL:
Gene Tree for SLC37A3 (if available)
TreeFam:
Gene Tree for SLC37A3 (if available)

Paralogs for SLC37A3 Gene

Paralogs for SLC37A3 Gene

genes like me logo Genes that share paralogs with SLC37A3: view

Variants for SLC37A3 Gene

Sequence variations from dbSNP and Humsavar for SLC37A3 Gene

SNP ID Clin Chr 07 pos Sequence Context AA Info Type
rs10215889 -- 140,402,393(+) taggt(C/T)tcagc intron-variant, upstream-variant-2KB
rs10228987 -- 140,350,892(+) AAAAA(A/T)TATCA intron-variant
rs10231057 -- 140,389,172(+) tgcct(C/T)tgcag intron-variant
rs10231060 -- 140,389,184(+) actaa(C/T)gaatt intron-variant
rs10234726 -- 140,377,887(+) AAAAA(A/T)TTTTT intron-variant

Structural Variations from Database of Genomic Variants (DGV) for SLC37A3 Gene

Variant ID Type Subtype PubMed ID
esv1228695 CNV insertion 17803354
esv1579138 CNV insertion 17803354
esv2735212 CNV deletion 23290073
esv2762706 CNV loss 21179565
esv3411273 CNV insertion 20981092
esv3572168 CNV loss 25503493
esv3572169 CNV loss 25503493
esv3615227 CNV gain 21293372
esv3615228 CNV gain 21293372
esv3615229 CNV loss 21293372
nsv1022919 CNV gain 25217958
nsv1026255 CNV gain 25217958
nsv1117763 CNV deletion 24896259
nsv473636 CNV novel sequence insertion 20440878
nsv478214 CNV novel sequence insertion 20440878
nsv522190 CNV gain 19592680
nsv957032 CNV insertion 24416366

Variation tolerance for SLC37A3 Gene

Residual Variation Intolerance Score: 52.5% of all genes are more intolerant (likely to be disease-causing)
Gene Damage Index Score: 10.29; 90.65% of all genes are more intolerant (likely to be disease-causing)

Relevant External Links for SLC37A3 Gene

Human Gene Mutation Database (HGMD)
SLC37A3
SNPedia medical, phenotypic, and genealogical associations of SNPs for
SLC37A3

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for SLC37A3 Gene

Disorders for SLC37A3 Gene

Relevant External Links for SLC37A3

Genetic Association Database (GAD)
SLC37A3
Atlas of Genetics and Cytogenetics in Oncology and Haematology:
SLC37A3

No disorders were found for SLC37A3 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for SLC37A3 Gene

Publications for SLC37A3 Gene

  1. SLC37A1 and SLC37A2 are phosphate-linked, glucose-6-phosphate antiporters. (PMID: 21949678) Pan C.J. … Chou J.Y. (PLoS ONE 2011) 3 4 64
  2. Human chromosome 7: DNA sequence and biology. (PMID: 12690205) Scherer S.W. … Tsui L.-C. (Science 2003) 3 4 64
  3. Towards a catalog of human genes and proteins: sequencing and analysis of 500 novel complete protein coding human cDNAs. (PMID: 11230166) Wiemann S. … Poustka A. (Genome Res. 2001) 3 4 64
  4. Characterization of the CLEAR network reveals an integrated control of cellular clearance pathways. (PMID: 21752829) Palmieri M. … Ballabio A. (Hum. Mol. Genet. 2011) 3 64
  5. Toward an understanding of the protein interaction network of the human liver. (PMID: 21988832) Wang J. … Yang X. (Mol. Syst. Biol. 2011) 3 64

Products for SLC37A3 Gene

Sources for SLC37A3 Gene

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