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Aliases for SLC36A2 Gene

Aliases for SLC36A2 Gene

  • Solute Carrier Family 36 (Proton/Amino Acid Symporter), Member 2 2 3
  • PAT2 3 4 6
  • Tramdorin-1 3 4
  • TRAMD1 3 4
  • Proton-Coupled Amino Acid Transporter 2 3
  • Solute Carrier Family 36 Member 2 4
  • Proton/Amino Acid Transporter 2 4

External Ids for SLC36A2 Gene

Previous GeneCards Identifiers for SLC36A2 Gene

  • GC05M150695
  • GC05M150723
  • GC05M150674
  • GC05M145839

Summaries for SLC36A2 Gene

Entrez Gene Summary for SLC36A2 Gene

  • This gene encodes a pH-dependent proton-coupled amino acid transporter that belongs to the amino acid auxin permease 1 protein family. The encoded protein primarily transports small amino acids such as glycine, alanine and proline. Mutations in this gene are associated with iminoglycinuria and hyperglycinuria. [provided by RefSeq, Sep 2010]

GeneCards Summary for SLC36A2 Gene

SLC36A2 (Solute Carrier Family 36 (Proton/Amino Acid Symporter), Member 2) is a Protein Coding gene. Diseases associated with SLC36A2 include hyperglycinuria and iminoglycinuria, digenic. Among its related pathways are Transport of glucose and other sugars, bile salts and organic acids, metal ions and amine compounds and Transport of glucose and other sugars, bile salts and organic acids, metal ions and amine compounds. GO annotations related to this gene include L-alanine transmembrane transporter activity and L-proline transmembrane transporter activity. An important paralog of this gene is SLC36A1.

UniProtKB/Swiss-Prot for SLC36A2 Gene

  • Involved in a pH-dependent electrogenic neuronal transport and sequestration of small amino acids. Transports glycine and proline. Inhibited by sarcosine (By similarity).

Gene Wiki entry for SLC36A2 Gene

No data available for Tocris Summary , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for SLC36A2 Gene

Genomics for SLC36A2 Gene

Regulatory Elements for SLC36A2 Gene

Genomic Location for SLC36A2 Gene

Start:
151,314,978 bp from pter
End:
151,347,590 bp from pter
Size:
32,613 bases
Orientation:
Minus strand

Genomic View for SLC36A2 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for SLC36A2 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for SLC36A2 Gene

Proteins for SLC36A2 Gene

  • Protein details for SLC36A2 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Q495M3-S36A2_HUMAN
    Recommended name:
    Proton-coupled amino acid transporter 2
    Protein Accession:
    Q495M3
    Secondary Accessions:
    • Q495M4
    • Q495M6
    • Q6ZWK5
    • Q7Z6B5

    Protein attributes for SLC36A2 Gene

    Size:
    483 amino acids
    Molecular mass:
    53216 Da
    Quaternary structure:
    No Data Available

    Alternative splice isoforms for SLC36A2 Gene

    UniProtKB/Swiss-Prot:

neXtProt entry for SLC36A2 Gene

Proteomics data for SLC36A2 Gene at MOPED

Post-translational modifications for SLC36A2 Gene

  • Modification sites at PhosphoSitePlus
  • Modification sites at neXtProt

Other Protein References for SLC36A2 Gene

ENSEMBL proteins:
Reactome Protein details:
REFSEQ proteins:

No data available for DME Specific Peptides for SLC36A2 Gene

Domains for SLC36A2 Gene

Gene Families for SLC36A2 Gene

Protein Domains for SLC36A2 Gene

InterPro:
ProtoNet:

Suggested Antigen Peptide Sequences for SLC36A2 Gene

GenScript: Design optimal peptide antigens:

Graphical View of Domain Structure for InterPro Entry

Q495M3

UniProtKB/Swiss-Prot:

S36A2_HUMAN :
  • Q495M3
Family:
  • Belongs to the amino acid/polyamine transporter 2 family.
genes like me logo Genes that share domains with SLC36A2: view

Function for SLC36A2 Gene

Molecular function for SLC36A2 Gene

UniProtKB/Swiss-Prot Function: Involved in a pH-dependent electrogenic neuronal transport and sequestration of small amino acids. Transports glycine and proline. Inhibited by sarcosine (By similarity).

Gene Ontology (GO) - Molecular Function for SLC36A2 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005280 hydrogen:amino acid symporter activity IBA --
GO:0015078 hydrogen ion transmembrane transporter activity IBA --
GO:0015180 L-alanine transmembrane transporter activity IBA --
GO:0015187 glycine transmembrane transporter activity IMP 19033659
GO:0015193 L-proline transmembrane transporter activity IBA --
genes like me logo Genes that share ontologies with SLC36A2: view

Animal Model Products

CRISPR Products

No data available for Enzyme Numbers (IUBMB) , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for SLC36A2 Gene

Localization for SLC36A2 Gene

Subcellular locations from UniProtKB/Swiss-Prot for SLC36A2 Gene

Cell membrane; Multi-pass membrane protein. Cytoplasm.

Subcellular locations from

COMPARTMENTS
Jensen Localization Image for SLC36A2 Gene COMPARTMENTS Subcellular localization image for SLC36A2 gene
Compartment Confidence
plasma membrane 5
nucleus 1

Gene Ontology (GO) - Cellular Components for SLC36A2 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005737 cytoplasm --
GO:0005774 vacuolar membrane IBA --
GO:0005886 plasma membrane TAS --
GO:0016021 integral component of membrane IEA --
GO:0070062 extracellular exosome IDA 19056867
genes like me logo Genes that share ontologies with SLC36A2: view

Pathways for SLC36A2 Gene

genes like me logo Genes that share pathways with SLC36A2: view

Interacting Proteins for SLC36A2 Gene

Gene Ontology (GO) - Biological Process for SLC36A2 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0006811 ion transport TAS --
GO:0006865 amino acid transport TAS --
GO:0015808 L-alanine transport IBA --
GO:0015816 glycine transport IBA --
GO:0015824 proline transport --
genes like me logo Genes that share ontologies with SLC36A2: view

Compounds for SLC36A2 Gene

(1) HMDB Compounds for SLC36A2 Gene

Compound Synonyms Cas Number PubMed IDs
Sarcosine
  • (Methylamino)acetate
107-97-1

(2) IUPHAR Ligand for SLC36A2 Gene

Ligand Type Action Affinity Pubmed IDs
alpha-methyl-D,L-tryptophan Inhibitor Inhibition 3.6
5-hydroxy-L-tryptophan Inhibitor Inhibition 2.8
genes like me logo Genes that share compounds with SLC36A2: view

Transcripts for SLC36A2 Gene

mRNA/cDNA for SLC36A2 Gene

Unigene Clusters for SLC36A2 Gene

Solute carrier family 36 (proton/amino acid symporter), member 2:
Representative Sequences:

CRISPR Products

Inhibitory RNA Products

  • Predesigned siRNA for gene silencing in human,mouse,rat for SLC36A2

Primer Products

  • OriGene qSTAR qPCR primer pairs in human,mouse,rat for SLC36A2

Flow Cytometry Products

Alternative Splicing Database (ASD) splice patterns (SP) for SLC36A2 Gene

No ASD Table

Relevant External Links for SLC36A2 Gene

GeneLoc Exon Structure for
SLC36A2
ECgene alternative splicing isoforms for
SLC36A2

Expression for SLC36A2 Gene

mRNA expression in normal human tissues for SLC36A2 Gene

mRNA expression in embryonic tissues and stem cells from LifeMap Discovery

mRNA differential expression in normal tissues according to GTEx for SLC36A2 Gene

This gene is overexpressed in Muscle - Skeletal (25.7), Kidney - Cortex (19.5), and Nerve - Tibial (6.2).

Integrated Proteomics: protein expression from ProteomicsDB, PaxDb, and MOPED for SLC36A2 Gene

SOURCE GeneReport for Unigene cluster for SLC36A2 Gene Hs.483877

mRNA Expression by UniProt/SwissProt for SLC36A2 Gene

Q495M3-S36A2_HUMAN
Tissue specificity: Abundantly expressed in kidney and muscle. Expressed in the S1 segment of the proximal tubule close to the glomerulus.
genes like me logo Genes that share expressions with SLC36A2: view

In Situ Assay Products

Orthologs for SLC36A2 Gene

This gene was present in the common ancestor of animals and fungi.

Orthologs for SLC36A2 Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia SLC36A2 35
  • 99.52 (n)
  • 99.17 (a)
SLC36A2 36
  • 99 (a)
OneToOne
cow
(Bos Taurus)
Mammalia SLC36A2 35
  • 87.07 (n)
  • 80.71 (a)
SLC36A2 36
  • 81 (a)
OneToOne
dog
(Canis familiaris)
Mammalia SLC36A2 35
  • 88.5 (n)
  • 85.45 (a)
SLC36A2 36
  • 85 (a)
OneToOne
mouse
(Mus musculus)
Mammalia Slc36a2 35
  • 84.52 (n)
  • 82.43 (a)
Slc36a2 16
Slc36a2 36
  • 82 (a)
OneToOne
oppossum
(Monodelphis domestica)
Mammalia SLC36A2 36
  • 68 (a)
OneToOne
platypus
(Ornithorhynchus anatinus)
Mammalia -- 36
  • 62 (a)
OneToMany
rat
(Rattus norvegicus)
Mammalia Slc36a2 35
  • 84.13 (n)
  • 81.46 (a)
chicken
(Gallus gallus)
Aves -- 36
  • 60 (a)
OneToMany
lizard
(Anolis carolinensis)
Reptilia -- 36
  • 62 (a)
OneToMany
zebrafish
(Danio rerio)
Actinopterygii slc36a1 36
  • 57 (a)
OneToMany
African malaria mosquito
(Anopheles gambiae)
Insecta AgaP_AGAP000473 35
  • 51.98 (n)
  • 40.84 (a)
fruit fly
(Drosophila melanogaster)
Insecta CG1139 36
  • 33 (a)
ManyToMany
CG12943 36
  • 24 (a)
ManyToMany
CG13384 36
  • 36 (a)
ManyToMany
CG16700 36
  • 32 (a)
ManyToMany
CG32079 36
  • 29 (a)
ManyToMany
CG32081 36
  • 26 (a)
ManyToMany
CG43693 36
  • 28 (a)
ManyToMany
CG4991 36
  • 26 (a)
ManyToMany
CG7888 36
  • 33 (a)
ManyToMany
CG8785 36
  • 30 (a)
ManyToMany
path 36
  • 29 (a)
ManyToMany
worm
(Caenorhabditis elegans)
Secernentea C44B7.6 36
  • 27 (a)
ManyToMany
F59B2.2 36
  • 23 (a)
ManyToMany
H32K16.1 36
  • 24 (a)
ManyToMany
T27A1.5 36
  • 32 (a)
ManyToMany
Y38H6C.17 36
  • 25 (a)
ManyToMany
Y43F4B.7 36
  • 31 (a)
ManyToMany
baker's yeast
(Saccharomyces cerevisiae)
Saccharomycetes AVT3 36
  • 17 (a)
ManyToMany
AVT4 36
  • 17 (a)
ManyToMany
sea squirt
(Ciona savignyi)
Ascidiacea -- 36
  • 43 (a)
OneToMany
Species with no ortholog for SLC36A2:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rainbow trout (Oncorhynchus mykiss)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)

Evolution for SLC36A2 Gene

ENSEMBL:
Gene Tree for SLC36A2 (if available)
TreeFam:
Gene Tree for SLC36A2 (if available)

Paralogs for SLC36A2 Gene

Paralogs for SLC36A2 Gene

Selected SIMAP similar genes for SLC36A2 Gene using alignment to 4 proteins:

Pseudogenes.org Pseudogenes for SLC36A2 Gene

genes like me logo Genes that share paralogs with SLC36A2: view

Variants for SLC36A2 Gene

Sequence variations from dbSNP and Humsavar for SLC36A2 Gene

SNP ID Clin Chr 05 pos Sequence Context AA Info Type MAF
rs185017 -- 151,344,552(-) TTGAC(A/T)AGAAG intron-variant
rs187412 -- 151,324,482(-) ggtgg(C/T)gggtg intron-variant
rs192192 -- 151,344,245(-) TTCAC(C/T)TGGTG reference, synonymous-codon
rs193551 -- 151,344,978(-) GCTGA(C/G)AAAAG intron-variant
rs246486 -- 151,348,319(-) AGACC(A/G)TCTTT upstream-variant-2KB

Relevant External Links for SLC36A2 Gene

HapMap Linkage Disequilibrium report
SLC36A2
Human Gene Mutation Database (HGMD)
SLC36A2

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Structural Variations from Database of Genomic Variants (DGV) for SLC36A2 Gene

Disorders for SLC36A2 Gene

MalaCards: The human disease database

MalaCards: The human disease database. (2) Diseases for SLC36A2 Gene including...

Search for SLC36A2 Gene in MalaCards »

(2) OMIM Diseases for SLC36A2 Gene (608331)

UniProtKB/Swiss-Prot

S36A2_HUMAN
  • Hyperglycinuria (HG) [MIM:138500]: A condition characterized by excess of glycine in the urine. In some cases it is associated with renal colic and renal oxalate stones. {ECO:0000269 PubMed:19033659}. Note=The disease is caused by mutations affecting the gene represented in this entry.
  • Iminoglycinuria (IG) [MIM:242600]: A disorder of renal tubular reabsorption of glycine and imino acids (proline and hydroxyproline), marked by excessive levels of all three substances in the urine. {ECO:0000269 PubMed:19033659}. Note=The disease is caused by mutations affecting distinct genetic loci, including the gene represented in this entry. Mutations in SLC36A2 that retain residual transport activity result in the IG phenotype only when combined with haploinsufficiency of the imino acid transporter SLC6A20 or deficiency of the neutral amino acid transporter SLC6A19. Additional polymorphisms and mutations in SLC6A18 can contribute to iminoglycinuria in some families.

Relevant External Links for SLC36A2

Genetic Association Database (GAD)
SLC36A2
Human Genome Epidemiology (HuGE) Navigator
SLC36A2
genes like me logo Genes that share disorders with SLC36A2: view

Publications for SLC36A2 Gene

  1. Organization and expression of the SLC36 cluster of amino acid transporter genes. (PMID: 15058382) Bermingham J.R. Jr. … Pennington J. (Mamm. Genome 2004) 3 4 23
  2. Iminoglycinuria and hyperglycinuria are discrete human phenotypes resulting from complex mutations in proline and glycine transporters. (PMID: 19033659) Broer S. … Rasko J.E. (J. Clin. Invest. 2008) 3 4 23
  3. Functional characterization of two novel mammalian electrogenic proton-dependent amino acid cotransporters. (PMID: 11959859) Boll M. … Daniel H. (J. Biol. Chem. 2002) 2 3
  4. A cluster of proton/amino acid transporter genes in the human and mouse genomes. (PMID: 12809675) Boll M. … Daniel H. (Genomics 2003) 3 4
  5. Coeliac disease-associated risk variants in TNFAIP3 and REL implicate altered NF-kappaB signalling. (PMID: 19240061) Trynka G. … Wijmenga C. (Gut 2009) 3 48

Products for SLC36A2 Gene

Sources for SLC36A2 Gene

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