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Aliases for SLC35E3 Gene

Aliases for SLC35E3 Gene

  • Solute Carrier Family 35, Member E3 2 3
  • Bladder Cancer-Overexpressed Gene 1 Protein 3 4
  • BLOV1 3 4
  • Bladder Cancer Overexpressed Protein 3
  • Solute Carrier Family 35, Member E2 3
  • Solute Carrier Family 35 Member E3 3

External Ids for SLC35E3 Gene

Summaries for SLC35E3 Gene

GeneCards Summary for SLC35E3 Gene

SLC35E3 (Solute Carrier Family 35, Member E3) is a Protein Coding gene.

UniProtKB/Swiss-Prot for SLC35E3 Gene

  • Putative transporter.

No data available for Entrez Gene Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for SLC35E3 Gene

Genomics for SLC35E3 Gene

Genomic Location for SLC35E3 Gene

Start:
68,746,106 bp from pter
End:
68,793,964 bp from pter
Size:
47,859 bases
Orientation:
Plus strand

Genomic View for SLC35E3 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for SLC35E3 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for SLC35E3 Gene

Regulatory Elements for SLC35E3 Gene

Proteins for SLC35E3 Gene

  • Protein details for SLC35E3 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Q7Z769-S35E3_HUMAN
    Recommended name:
    Solute carrier family 35 member E3
    Protein Accession:
    Q7Z769
    Secondary Accessions:
    • A8K0T0
    • Q0P5Y5
    • Q9P0V1

    Protein attributes for SLC35E3 Gene

    Size:
    313 amino acids
    Molecular mass:
    35066 Da
    Quaternary structure:
    No Data Available
    SequenceCaution:
    • Sequence=AAF73127.1; Type=Frameshift; Positions=4, 16, 40; Evidence={ECO:0000305};

neXtProt entry for SLC35E3 Gene

Proteomics data for SLC35E3 Gene at MOPED

Post-translational modifications for SLC35E3 Gene

  • Modification sites at PhosphoSitePlus
  • Modification sites at neXtProt

Other Protein References for SLC35E3 Gene

ENSEMBL proteins:
REFSEQ proteins:

No data available for DME Specific Peptides for SLC35E3 Gene

Domains for SLC35E3 Gene

Gene Families for SLC35E3 Gene

Protein Domains for SLC35E3 Gene

InterPro:
ProtoNet:

Suggested Antigen Peptide Sequences for SLC35E3 Gene

GenScript: Design optimal peptide antigens:

Graphical View of Domain Structure for InterPro Entry

Q7Z769

UniProtKB/Swiss-Prot:

S35E3_HUMAN
Family:
  • Belongs to the TPT transporter family. SLC35E subfamily.:
    • Q7Z769
genes like me logo Genes that share domains with SLC35E3: view

Function for SLC35E3 Gene

Molecular function for SLC35E3 Gene

UniProtKB/Swiss-Prot Function: Putative transporter.

Phenotypes for SLC35E3 Gene

genes like me logo Genes that share phenotypes with SLC35E3: view

No data available for Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for SLC35E3 Gene

Localization for SLC35E3 Gene

Subcellular locations from UniProtKB/Swiss-Prot for SLC35E3 Gene

Membrane; Multi-pass membrane protein.

Subcellular locations from

COMPARTMENTS
Jensen Localization Image for SLC35E3 Gene COMPARTMENTS Subcellular localization image for SLC35E3 gene
Compartment Confidence
plasma membrane 3
endoplasmic reticulum 1

Gene Ontology (GO) - Cellular Components for SLC35E3 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0016020 membrane --
GO:0016021 integral component of membrane IEA --
genes like me logo Genes that share ontologies with SLC35E3: view

Pathways for SLC35E3 Gene

SuperPathways for SLC35E3 Gene

No Data Available

Interacting Proteins for SLC35E3 Gene

Gene Ontology (GO) - Biological Process for SLC35E3 Gene

None

No data available for Pathways by source for SLC35E3 Gene

Transcripts for SLC35E3 Gene

Unigene Clusters for SLC35E3 Gene

Solute carrier family 35, member E3:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for SLC35E3 Gene

No ASD Table

Relevant External Links for SLC35E3 Gene

GeneLoc Exon Structure for
SLC35E3
ECgene alternative splicing isoforms for
SLC35E3

Expression for SLC35E3 Gene

mRNA expression in normal human tissues for SLC35E3 Gene

mRNA expression in embryonic tissues and stem cells from LifeMap Discovery

Integrated Proteomics: protein expression from ProteomicsDB, PaxDb, and MOPED for SLC35E3 Gene

SOURCE GeneReport for Unigene cluster for SLC35E3 Gene Hs.506011

genes like me logo Genes that share expressions with SLC35E3: view

No data available for mRNA differential expression in normal tissues and mRNA Expression by UniProt/SwissProt for SLC35E3 Gene

Orthologs for SLC35E3 Gene

This gene was present in the common ancestor of eukaryotes.

Orthologs for SLC35E3 Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia SLC35E3 35
  • 99.25 (n)
  • 99.04 (a)
SLC35E3 36
  • 99 (a)
OneToOne
cow
(Bos Taurus)
Mammalia SLC35E3 35
  • 92.44 (n)
  • 93.61 (a)
SLC35E3 36
  • 94 (a)
OneToOne
dog
(Canis familiaris)
Mammalia SLC35E3 35
  • 91.35 (n)
  • 94.94 (a)
SLC35E3 36
  • 95 (a)
OneToOne
mouse
(Mus musculus)
Mammalia Slc35e3 35
  • 89.46 (n)
  • 92.33 (a)
Slc35e3 16
Slc35e3 36
  • 92 (a)
OneToOne
oppossum
(Monodelphis domestica)
Mammalia SLC35E3 36
  • 90 (a)
OneToOne
platypus
(Ornithorhynchus anatinus)
Mammalia -- 36
  • 81 (a)
OneToMany
-- 36
  • 65 (a)
OneToMany
rat
(Rattus norvegicus)
Mammalia Slc35e3 35
  • 89.88 (n)
  • 92.65 (a)
chicken
(Gallus gallus)
Aves SLC35E3 35
  • 76.63 (n)
  • 83.06 (a)
SLC35E3 36
  • 81 (a)
OneToOne
African clawed frog
(Xenopus laevis)
Amphibia Xl.8418 35
rainbow trout
(Oncorhynchus mykiss)
Actinopterygii Omy.5791 35
zebrafish
(Danio rerio)
Actinopterygii slc35e3 35
  • 72.52 (n)
  • 81.79 (a)
slc35e3 36
  • 81 (a)
OneToOne
thale cress
(Arabidopsis thaliana)
eudicotyledons AT2G28315 35
  • 43.2 (n)
  • 34.69 (a)
rice
(Oryza sativa)
Liliopsida Os02g0628200 35
  • 45.9 (n)
  • 35.02 (a)
sea squirt
(Ciona savignyi)
Ascidiacea -- 36
  • 55 (a)
OneToMany
-- 36
  • 61 (a)
OneToMany
-- 36
  • 37 (a)
OneToMany
Species with no ortholog for SLC35E3:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)

Evolution for SLC35E3 Gene

ENSEMBL:
Gene Tree for SLC35E3 (if available)
TreeFam:
Gene Tree for SLC35E3 (if available)

Paralogs for SLC35E3 Gene

Pseudogenes.org Pseudogenes for SLC35E3 Gene

genes like me logo Genes that share paralogs with SLC35E3: view

No data available for Paralogs for SLC35E3 Gene

Variants for SLC35E3 Gene

Sequence variations from dbSNP and Humsavar for SLC35E3 Gene

SNP ID Clin Chr 12 pos Sequence Context AA Info Type MAF
rs3741600 -- 68,760,225(+) AATTC(A/G)ACTGT intron-variant, downstream-variant-500B
rs4913466 -- 68,761,365(+) caaca(C/T)agtaa intron-variant
rs4913467 -- 68,763,418(+) gagtt(G/T)cgctc intron-variant
rs7296782 -- 68,745,902(+) AGCCA(G/T)AGAGA upstream-variant-2KB
rs7980064 -- 68,765,636(+) tatat(A/G)tgtgt utr-variant-3-prime

Structural Variations from Database of Genomic Variants (DGV) for SLC35E3 Gene

Variant ID Type Subtype PubMed ID
nsv522941 CNV Gain 19592680
nsv759 CNV Loss 18451855

Relevant External Links for SLC35E3 Gene

HapMap Linkage Disequilibrium report
SLC35E3

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for SLC35E3 Gene

Disorders for SLC35E3 Gene

No disorders were found for SLC35E3 Gene.

No data available for UniProtKB/Swiss-Prot for SLC35E3 Gene

Publications for SLC35E3 Gene

  1. The secreted protein discovery initiative (SPDI), a large-scale effort to identify novel human secreted and transmembrane proteins: a bioinformatics assessment. (PMID: 12975309) Clark H.F. … Gray A.M. (Genome Res. 2003) 2 3 4
  2. hORFeome v3.1: a resource of human open reading frames representing over 10,000 human genes. (PMID: 17207965) Lamesch P. … Vidal M. (Genomics 2007) 3
  3. Genome-wide association study of hematological and biochemical traits in a Japanese population. (PMID: 20139978) Kamatani Y. … Kamatani N. (Nat. Genet. 2010) 3
  4. Bcl2-associated athanogene 3 interactome analysis reveals a new role in modulating proteasome activity. (PMID: 23824909) Chen Y. … Ge F. (Mol. Cell Proteomics 2013) 3
  5. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T. … Sugano S. (Nat. Genet. 2004) 4

Products for SLC35E3 Gene

Sources for SLC35E3 Gene

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