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Aliases for SLC25A3P1 Gene

Aliases for SLC25A3P1 Gene

  • Solute Carrier Family 25 Member 3 Pseudogene 1 2 3 5
  • Solute Carrier Family 25 (Mitochondrial Carrier; Phosphate Carrier), Member 3 Pseudogene 1 2
  • Solute Carrier Family 24 (Sodium/Potassium/Calcium Exchanger), Member 3 Pseudogene 1 2

External Ids for SLC25A3P1 Gene

Previous GeneCards Identifiers for SLC25A3P1 Gene

  • GC01M053878

Summaries for SLC25A3P1 Gene

GeneCards Summary for SLC25A3P1 Gene

SLC25A3P1 (Solute Carrier Family 25 Member 3 Pseudogene 1) is a Pseudogene.

Additional gene information for SLC25A3P1 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for SLC25A3P1 Gene

Genomics for SLC25A3P1 Gene

GeneHancer (GH) Regulatory Elements for SLC25A3P1 Gene

Promoters and enhancers for SLC25A3P1 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01I053429 Enhancer 0.7 ENCODE dbSUPER 5.1 +9.1 9100 2.6 CTCF SP1 NRF1 SCRT2 ZSCAN4 POU5F1 SIN3A DMRTB1 LRP8 LOC100507564 MAGOH LINC01771 RNU7-95P SLC25A3P1 LOC105378733 ENSG00000230138
GH01I053434 Enhancer 0.4 ENCODE dbSUPER 7.4 +4.9 4861 2 DMRTB1 RNU7-95P SLC25A3P1 LRRC42 LOC105378733 ENSG00000230138
GH01I053442 Enhancer 0.6 ENCODE 0.8 -2.4 -2403 0.2 ZNF362 SOX6 CEBPB ZNF223 ZFHX2 GLIS1 NFE2 EMSY ZBTB17 SPI1 RNU7-95P SLC25A3P1 LOC105378733 GC01M053449
GH01I053411 Enhancer 1.3 Ensembl ENCODE dbSUPER 0.3 +26.6 26587 3.5 HDGF PKNOX1 ZNF473 BMI1 BATF KLF5 IRF4 ZNF335 GLIS2 GATA2 LRP8 LOC100507564 MAGOH LINC01771 ENSG00000232762 RNU7-95P DMRTB1 LOC105378733 SLC25A3P1 ENSG00000230138
GH01I053447 Enhancer 0.8 ENCODE dbSUPER 0.4 -9.0 -8957 3.1 SCRT1 CTCF PKNOX1 USF1 CBFA2T3 ZNF407 SIN3A SCRT2 POU5F1 PRDM10 GC01M053449 RNU7-95P DMRTB1 SLC25A3P1 LOC105378733
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around SLC25A3P1 on UCSC Golden Path with GeneCards custom track

Genomic Locations for SLC25A3P1 Gene

Genomic Locations for SLC25A3P1 Gene
chr1:53,413,149-53,440,020
(GRCh38/hg38)
Size:
26,872 bases
Orientation:
Minus strand
chr1:53,878,821-53,905,693
(GRCh37/hg19)

Genomic View for SLC25A3P1 Gene

Genes around SLC25A3P1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
SLC25A3P1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for SLC25A3P1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for SLC25A3P1 Gene

Proteins for SLC25A3P1 Gene

Post-translational modifications for SLC25A3P1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for SLC25A3P1 Gene

Domains & Families for SLC25A3P1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for SLC25A3P1 Gene

Function for SLC25A3P1 Gene

Phenotypes From GWAS Catalog for SLC25A3P1 Gene

Animal Model Products

Inhibitory RNA Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for SLC25A3P1 Gene

Localization for SLC25A3P1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for SLC25A3P1 Gene

Pathways & Interactions for SLC25A3P1 Gene

SuperPathways for SLC25A3P1 Gene

No Data Available

Interacting Proteins for SLC25A3P1 Gene

Gene Ontology (GO) - Biological Process for SLC25A3P1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for SLC25A3P1 Gene

Drugs & Compounds for SLC25A3P1 Gene

No Compound Related Data Available

Transcripts for SLC25A3P1 Gene

mRNA/cDNA for SLC25A3P1 Gene

(3) Additional mRNA sequences :
(4) Selected AceView cDNA sequences:
(6) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for SLC25A3P1 Gene

Solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 3 pseudogene 1:
Representative Sequences:

Inhibitory RNA Products

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for SLC25A3P1 Gene

No ASD Table

Relevant External Links for SLC25A3P1 Gene

GeneLoc Exon Structure for
SLC25A3P1
ECgene alternative splicing isoforms for
SLC25A3P1

Expression for SLC25A3P1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for SLC25A3P1 Gene

mRNA differential expression in normal tissues according to GTEx for SLC25A3P1 Gene

This gene is overexpressed in Testis (x47.7).

NURSA nuclear receptor signaling pathways regulating expression of SLC25A3P1 Gene:

SLC25A3P1

SOURCE GeneReport for Unigene cluster for SLC25A3P1 Gene:

Hs.99394
genes like me logo Genes that share expression patterns with SLC25A3P1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for SLC25A3P1 Gene

Orthologs for SLC25A3P1 Gene

Evolution for SLC25A3P1 Gene

ENSEMBL:
Gene Tree for SLC25A3P1 (if available)
TreeFam:
Gene Tree for SLC25A3P1 (if available)

No data available for Orthologs for SLC25A3P1 Gene

Paralogs for SLC25A3P1 Gene

No data available for Paralogs for SLC25A3P1 Gene

Variants for SLC25A3P1 Gene

Sequence variations from dbSNP and Humsavar for SLC25A3P1 Gene

SNP ID Clin Chr 01 pos Variation AA Info Type
rs1000519915 -- 53,440,760(-) G/A upstream_transcript_variant
rs1001103664 -- 53,439,511(-) G/A intron_variant
rs1001648777 -- 53,439,062(-) C/A intron_variant
rs1002162455 -- 53,438,791(-) G/T non_coding_transcript_variant
rs1003896279 -- 53,438,296(-) A/G downstream_transcript_variant

Structural Variations from Database of Genomic Variants (DGV) for SLC25A3P1 Gene

Variant ID Type Subtype PubMed ID
nsv509269 CNV insertion 20534489

Additional Variant Information for SLC25A3P1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
SLC25A3P1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for SLC25A3P1 Gene

Disorders for SLC25A3P1 Gene

Additional Disease Information for SLC25A3P1

No disorders were found for SLC25A3P1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for SLC25A3P1 Gene

Publications for SLC25A3P1 Gene

  1. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T … Sugano S (Nature genetics 2004) 3 58
  2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg RL … Mammalian Gene Collection Program Team (Proceedings of the National Academy of Sciences of the United States of America 2002) 3 58

Products for SLC25A3P1 Gene

Sources for SLC25A3P1 Gene

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