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Aliases for SLC25A36 Gene

Aliases for SLC25A36 Gene

  • Solute Carrier Family 25 (Pyrimidine Nucleotide Carrier), Member 36 2 3
  • Solute Carrier Family 25, Member 36 2 3
  • Solute Carrier Family 25 (Pyrimidine Nucleotide Carrier ), Member 36 3
  • Solute Carrier Family 25 Member 36 3
  • PNC2 3

External Ids for SLC25A36 Gene

Previous GeneCards Identifiers for SLC25A36 Gene

  • GC03P142144
  • GC03P140660
  • GC03P138035

Summaries for SLC25A36 Gene

GeneCards Summary for SLC25A36 Gene

SLC25A36 (Solute Carrier Family 25 (Pyrimidine Nucleotide Carrier), Member 36) is a Protein Coding gene. An important paralog of this gene is SLC25A33.

UniProtKB/Swiss-Prot for SLC25A36 Gene

  • Mitochondrial transporter that imports/exports pyrimidine nucleotides into and from mitochondria. Transports preferentially cytosine and uracil (deoxy)nucleoside mono-, di-, and triphosphates by uniport and antiport mechanism. Also transports guanine but not adenine (deoxy)nucleotides. Is inhibited strongly by pyridoxal 5-phosphate, 4,7-diphenyl-1,10-phenanthroline, tannic acid, and mercurials (mercury dichloride, Mersalyl acid, p-hydroxymercuribenzoate). Participates in mitochondrial genome maintenance, regulation of mitochondrial membrane potential and mitochondrial respiration.

No data available for Entrez Gene Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for SLC25A36 Gene

Genomics for SLC25A36 Gene

Regulatory Elements for SLC25A36 Gene

Epigenetics Products

  • DNA Methylation CpG Assay Predesigned for Pyrosequencing in human,mouse,rat

Genomic Location for SLC25A36 Gene

Start:
140,941,820 bp from pter
End:
140,979,943 bp from pter
Size:
38,124 bases
Orientation:
Plus strand

Genomic View for SLC25A36 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for SLC25A36 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for SLC25A36 Gene

Proteins for SLC25A36 Gene

  • Protein details for SLC25A36 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Q96CQ1-S2536_HUMAN
    Recommended name:
    Solute carrier family 25 member 36
    Protein Accession:
    Q96CQ1
    Secondary Accessions:
    • A8MYF7
    • Q05CY1
    • Q9H0G8
    • Q9NVN5

    Protein attributes for SLC25A36 Gene

    Size:
    311 amino acids
    Molecular mass:
    34283 Da
    Quaternary structure:
    No Data Available

    Alternative splice isoforms for SLC25A36 Gene

    UniProtKB/Swiss-Prot:

neXtProt entry for SLC25A36 Gene

Proteomics data for SLC25A36 Gene at MOPED

Post-translational modifications for SLC25A36 Gene

  • Modification sites at PhosphoSitePlus
  • Modification sites at neXtProt

No data available for DME Specific Peptides for SLC25A36 Gene

Domains for SLC25A36 Gene

Gene Families for SLC25A36 Gene

Protein Domains for SLC25A36 Gene

Suggested Antigen Peptide Sequences for SLC25A36 Gene

GenScript: Design optimal peptide antigens:

Graphical View of Domain Structure for InterPro Entry

Q96CQ1

UniProtKB/Swiss-Prot:

S2536_HUMAN :
  • Q96CQ1
Family:
  • Belongs to the mitochondrial carrier (TC 2.A.29) family.
Similarity:
  • Contains 3 Solcar repeats.
genes like me logo Genes that share domains with SLC25A36: view

Function for SLC25A36 Gene

Molecular function for SLC25A36 Gene

UniProtKB/Swiss-Prot BiophysicochemicalProperties: Kinetic parameters: KM=1.19 mM for UTP (at 25 degrees Celsius) {ECO:0000269 PubMed:25320081}; KM=0.21 mM for CTP (at 25 degrees Celsius) {ECO:0000269 PubMed:25320081}; KM=2.5 mM for TTP (at 25 degrees Celsius) {ECO:0000269 PubMed:25320081}; KM=0.23 mM for GTP (at 25 degrees Celsius) {ECO:0000269 PubMed:25320081}; Vmax=30.7 umol/min/g enzyme toward UTP (at 25 degrees Celsius) {ECO:0000269 PubMed:25320081}; Vmax=51.2 umol/min/g enzyme toward CTP (at 25 degrees Celsius) {ECO:0000269 PubMed:25320081}; Vmax=8 umol/min/g enzyme toward TTP (at 25 degrees Celsius) {ECO:0000269 PubMed:25320081}; Vmax=23.6 umol/min/g enzyme toward GTP (at 25 degrees Celsius) {ECO:0000269 PubMed:25320081}; Note=The inhibitory constants (Ki) of these compounds are 1.3 um (UTP), 224 um (CTP), 276 um (GTP), and 181 um (ITP). CTP is the best substrate. {ECO:0000269 PubMed:25320081};
UniProtKB/Swiss-Prot Function: Mitochondrial transporter that imports/exports pyrimidine nucleotides into and from mitochondria. Transports preferentially cytosine and uracil (deoxy)nucleoside mono-, di-, and triphosphates by uniport and antiport mechanism. Also transports guanine but not adenine (deoxy)nucleotides. Is inhibited strongly by pyridoxal 5-phosphate, 4,7-diphenyl-1,10-phenanthroline, tannic acid, and mercurials (mercury dichloride, Mersalyl acid, p-hydroxymercuribenzoate). Participates in mitochondrial genome maintenance, regulation of mitochondrial membrane potential and mitochondrial respiration.

Gene Ontology (GO) - Molecular Function for SLC25A36 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0015218 pyrimidine nucleotide transmembrane transporter activity IDA 25320081
genes like me logo Genes that share ontologies with SLC25A36: view

Phenotypes for SLC25A36 Gene

GenomeRNAi human phenotypes for SLC25A36:
genes like me logo Genes that share phenotypes with SLC25A36: view

Animal Model Products

CRISPR Products

miRNA for SLC25A36 Gene

miRTarBase miRNAs that target SLC25A36

miRNA Products

Inhibitory RNA Products

  • Predesigned siRNA for gene silencing in human,mouse,rat for SLC25A36

In Situ Assay Products

Flow Cytometry Products

No data available for Enzyme Numbers (IUBMB) , Animal Models , Transcription Factor Targeting and HOMER Transcription for SLC25A36 Gene

Localization for SLC25A36 Gene

Subcellular locations from UniProtKB/Swiss-Prot for SLC25A36 Gene

Mitochondrion inner membrane; Multi-pass membrane protein.

Subcellular locations from

COMPARTMENTS
Jensen Localization Image for SLC25A36 Gene COMPARTMENTS Subcellular localization image for SLC25A36 gene
Compartment Confidence
mitochondrion 5
extracellular 2
cytosol 1
endoplasmic reticulum 1
nucleus 1
peroxisome 1

Gene Ontology (GO) - Cellular Components for SLC25A36 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005739 mitochondrion IDA 25320081
GO:0005743 mitochondrial inner membrane IEA --
GO:0016021 integral component of membrane IEA --
genes like me logo Genes that share ontologies with SLC25A36: view

Pathways for SLC25A36 Gene

SuperPathways for SLC25A36 Gene

No Data Available

Gene Ontology (GO) - Biological Process for SLC25A36 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0000002 mitochondrial genome maintenance IDA 25320081
GO:0006810 transport --
GO:0006864 pyrimidine nucleotide transport IDA 25320081
GO:0007005 mitochondrion organization IDA 25320081
GO:0032355 response to estradiol IDA 15831516
genes like me logo Genes that share ontologies with SLC25A36: view

No data available for Pathways by source for SLC25A36 Gene

Transcripts for SLC25A36 Gene

Unigene Clusters for SLC25A36 Gene

Solute carrier family 25 (pyrimidine nucleotide carrier ), member 36:
Representative Sequences:

CRISPR Products

miRNA Products

Inhibitory RNA Products

  • Predesigned siRNA for gene silencing in human,mouse,rat for SLC25A36

Primer Products

Flow Cytometry Products

Alternative Splicing Database (ASD) splice patterns (SP) for SLC25A36 Gene

ExUns: 1a · 1b · 1c · 1d · 1e ^ 2 ^ 3a · 3b · 3c ^ 4 ^ 5a · 5b ^ 6 ^ 7a · 7b · 7c · 7d ^ 8 ^ 9a · 9b · 9c ^ 10a · 10b · 10c ^ 11a · 11b ·
SP1: - - - - - - - - - -
SP2: - - - - - - - - - -
SP3: - - - - - - - -
SP4: - - - - - -
SP5: - - - - - -
SP6: - - - - -
SP7: - - - - - - - - - -
SP8: - -
SP9: - - -
SP10:
SP11: -

ExUns: 11c
SP1:
SP2:
SP3:
SP4:
SP5:
SP6:
SP7:
SP8:
SP9:
SP10:
SP11:

Relevant External Links for SLC25A36 Gene

GeneLoc Exon Structure for
SLC25A36
ECgene alternative splicing isoforms for
SLC25A36

Expression for SLC25A36 Gene

mRNA expression in normal human tissues for SLC25A36 Gene

mRNA expression in embryonic tissues and stem cells from LifeMap Discovery

Integrated Proteomics: protein expression from ProteomicsDB, PaxDb, MOPED, and MaxQB for SLC25A36 Gene

SOURCE GeneReport for Unigene cluster for SLC25A36 Gene Hs.144130

mRNA Expression by UniProt/SwissProt for SLC25A36 Gene

Q96CQ1-S2536_HUMAN
Tissue specificity: Expressed at moderate level.
genes like me logo Genes that share expressions with SLC25A36: view

In Situ Assay Products

No data available for mRNA differential expression in normal tissues for SLC25A36 Gene

Orthologs for SLC25A36 Gene

This gene was present in the common ancestor of animals and fungi.

Orthologs for SLC25A36 Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia SLC25A36 35
  • 99.57 (n)
  • 99.68 (a)
SLC25A36 36
  • 100 (a)
OneToOne
cow
(Bos Taurus)
Mammalia SLC25A36 35
  • 93.78 (n)
  • 97.11 (a)
SLC25A36 36
  • 97 (a)
OneToOne
dog
(Canis familiaris)
Mammalia SLC25A36 35
  • 95.15 (n)
  • 97.32 (a)
SLC25A36 36
  • 97 (a)
OneToOne
mouse
(Mus musculus)
Mammalia Slc25a36 35
  • 91.21 (n)
  • 96.14 (a)
Slc25a36 16
Slc25a36 36
  • 96 (a)
OneToOne
oppossum
(Monodelphis domestica)
Mammalia SLC25A36 36
  • 91 (a)
OneToOne
platypus
(Ornithorhynchus anatinus)
Mammalia SLC25A36 36
  • 88 (a)
OneToOne
rat
(Rattus norvegicus)
Mammalia Slc25a36 35
  • 91.85 (n)
  • 97.11 (a)
chicken
(Gallus gallus)
Aves SLC25A36 35
  • 82.64 (n)
  • 90.03 (a)
SLC25A36 36
  • 89 (a)
OneToOne
lizard
(Anolis carolinensis)
Reptilia SLC25A36 36
  • 89 (a)
OneToOne
tropical clawed frog
(Silurana tropicalis)
Amphibia slc25a36 35
  • 76.66 (n)
  • 90.55 (a)
Str.11825 35
zebrafish
(Danio rerio)
Actinopterygii slc25a36a 35
  • 75.78 (n)
  • 86.82 (a)
slc25a36a 36
  • 87 (a)
OneToMany
slc25a36b 36
  • 79 (a)
OneToMany
African malaria mosquito
(Anopheles gambiae)
Insecta AgaP_AGAP009333 35
  • 54.66 (n)
  • 60.84 (a)
fruit fly
(Drosophila melanogaster)
Insecta CG18317 35
  • 55.93 (n)
  • 59.06 (a)
CG18317 36
  • 48 (a)
OneToMany
worm
(Caenorhabditis elegans)
Secernentea T09F3.2 35
  • 55.6 (n)
  • 53.1 (a)
T09F3.2 36
  • 37 (a)
OneToMany
A. gosspyii yeast
(Ashbya gossypii)
Saccharomycetes AGOS_AEL253W 35
  • 51.88 (n)
  • 46.76 (a)
baker's yeast
(Saccharomyces cerevisiae)
Saccharomycetes RIM2 35
  • 51.11 (n)
  • 43.67 (a)
RIM2 36
  • 33 (a)
OneToMany
RIM2 38
K. lactis yeast
(Kluyveromyces lactis)
Saccharomycetes KLLA0E23629g 35
  • 51.51 (n)
  • 43.48 (a)
bread mold
(Neurospora crassa)
Ascomycetes NCU01916 35
  • 47.27 (n)
  • 42.14 (a)
fission yeast
(Schizosaccharomyces pombe)
Schizosaccharomycetes SPAC688.09 35
  • 51.52 (n)
  • 41.75 (a)
sea squirt
(Ciona savignyi)
Ascidiacea CSA.998 36
  • 42 (a)
OneToMany
Species with no ortholog for SLC25A36:
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rainbow trout (Oncorhynchus mykiss)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • wheat (Triticum aestivum)

Evolution for SLC25A36 Gene

ENSEMBL:
Gene Tree for SLC25A36 (if available)
TreeFam:
Gene Tree for SLC25A36 (if available)

Paralogs for SLC25A36 Gene

Paralogs for SLC25A36 Gene

Selected SIMAP similar genes for SLC25A36 Gene using alignment to 6 proteins:

Pseudogenes.org Pseudogenes for SLC25A36 Gene

genes like me logo Genes that share paralogs with SLC25A36: view

Variants for SLC25A36 Gene

Sequence variations from dbSNP and Humsavar for SLC25A36 Gene

SNP ID Clin Chr 03 pos Sequence Context AA Info Type MAF
rs877142 -- 140,962,120(+) TACCA(A/G)TTTCT intron-variant
rs877143 -- 140,962,167(+) TCAAG(A/T)GTATC intron-variant
rs1047306 -- 140,976,948(+) AATTA(A/T)TTGGC utr-variant-3-prime
rs1047321 -- 140,977,887(+) TTTTT(G/T)GGGGG utr-variant-3-prime
rs1047330 -- 140,979,099(+) TATCA(A/C)CAAAA utr-variant-3-prime

Structural Variations from Database of Genomic Variants (DGV) for SLC25A36 Gene

Variant ID Type Subtype PubMed ID
nsv521218 CNV Loss 19592680

Relevant External Links for SLC25A36 Gene

HapMap Linkage Disequilibrium report
SLC25A36

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for SLC25A36 Gene

Disorders for SLC25A36 Gene

Relevant External Links for SLC25A36

Genetic Association Database (GAD)
SLC25A36
Human Genome Epidemiology (HuGE) Navigator
SLC25A36
genes like me logo Genes that share disorders with SLC25A36: view

No data available for UniProtKB/Swiss-Prot for SLC25A36 Gene

Publications for SLC25A36 Gene

  1. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T. … Sugano S. (Nat. Genet. 2004) 3 4
  2. Genome-wide association analysis of susceptibility and clinical phenotype in multiple sclerosis. (PMID: 19010793) Baranzini S.E. … Oksenberg J.R. (Hum. Mol. Genet. 2009) 3 48
  3. Genetic variants in nuclear-encoded mitochondrial genes influence AIDS progression. (PMID: 20877624) Hendrickson S.L. … O'Brien S.J. (PLoS ONE 2010) 3 48
  4. The human SLC25A33 and SLC25A36 genes of solute carrier family 25 encode two mitochondrial pyrimidine nucleotide transporters. (PMID: 25320081) Di Noia M.A. … Palmieri F. (J. Biol. Chem. 2014) 3 4
  5. Towards a catalog of human genes and proteins: sequencing and analysis of 500 novel complete protein coding human cDNAs. (PMID: 11230166) Wiemann S. … Poustka A. (Genome Res. 2001) 4

Products for SLC25A36 Gene

Sources for SLC25A36 Gene

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