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SLC25A36 Gene

protein-coding   GIFtS: 53
GCID: GC03P140660

Solute Carrier Family 25 (Pyrimidine Nucleotide Carrier...

(Previous names: solute carrier family 25, member 36)
  Search for SLC25A36
at  

(According to 1HGNC, 2Entrez Gene,
3UniProtKB/Swiss-Prot, 4UniProtKB/TrEMBL, 5OMIM, 6GeneLoc, 7Ensembl, 8DME, 9miRBase, 10fRNAdb, 12H-InvDB, 13NCBI, 14NONCODE, and/or 15RNAdb)
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Aliases
Solute Carrier Family 25 (Pyrimidine Nucleotide Carrier ), Member
361 2
Solute Carrier Family 25, Member 361 2
PNC22
Solute Carrier Family 25 Member 362

External Ids:    HGNC: 255541   Entrez Gene: 551862   Ensembl: ENSG000001141207   UniProtKB: Q96CQ13   

Export aliases for SLC25A36 gene to outside databases

Previous GC identifers: GC03P142144 GC03P138035


(According to Entrez Gene, GeneCards, Tocris Bioscience, Wikipedia's Gene Wiki, PharmGKB,
UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL)
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GeneCards Summary for SLC25A36 Gene:
SLC25A36 (solute carrier family 25 (pyrimidine nucleotide carrier ), member 36) is a protein-coding gene. An important paralog of this gene is SLC25A33.


(According to GeneLoc and/or HGNC, and/or
Entrez Gene (NCBI build 37),
and/or miRBase,
Genomic Views according to UCSC (hg19) and Ensembl (release 75), Regulatory elements and Epigenetics data according to QIAGEN, and/or SwitchGear Genomics)
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RefSeq DNA sequence at NCBI GenBank:
NC_000003.11  NT_005612.17  NC_018914.2  
Regulatory elements:
   Regulatory transcription factor binding sites in the SLC25A36 gene promoter:
         Nkx3-1   Max1   FOXD1   HSF1 (long)   Nkx3-1 v1   FOXL1   HFH-1   HSF1short   c-Myb   c-Myc   
         Other transcription factors

SwitchGear Promoter luciferase reporter plasmidSLC25A36 promoter sequence
   Search Chromatin IP Primers for SLC25A36

Epigenetics:
DNA Methylation CpG Assay Predesigned for Pyrosequencing in human, mouse, rat SLC25A36


Genomic Location:
Genomic View: UCSC Golden Path with GeneCards custom track

Entrez Gene cytogenetic band: 3q23   Ensembl cytogenetic band:  3q23   HGNC cytogenetic band: 3q23

SLC25A36 Gene in genomic location: bands according to Ensembl, locations according to (and/or Entrez Gene and/or Ensembl if different)
SLC25A36 gene location

GeneLoc information about chromosome 3         GeneLoc Exon Structure

GeneLoc location for GC03P140660:  view genomic region     (about GC identifiers)

Start:
140,660,662 bp from pter      End:
140,698,785 bp from pter
Size:
38,124 bases      Orientation:
plus strand

(According to 1UniProtKB, HORDE, 2neXtProt, Ensembl, and/or Reactome, Modification sites according to PhosphoSitePlus, Specific Peptides from DME, RefSeq according to NCBI, PDB rendering according to OCA and/or Proteopedia, Recombinant Proteins from EMD Millipore, R&D Systems, GenScript, Enzo Life Sciences, OriGene, Novus Biologicals, Sino Biological, ProSpec, Cloud-Clone Corp., and/or eBioscience,
Biochemical Assays by EMD Millipore, R&D Systems, OriGene, GenScript, Cell Signaling Technology, Enzo Life Sciences, Cloud-Clone Corp., and/or eBioscience, Antibodies by EMD Millipore, R&D Systems, Cell Signaling Technology, OriGene, Novus Biologicals, Thermo Fisher Scientific, LSBio, Abcam, Cloud-Clone Corp, and/or others.)
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UniProtKB/Swiss-Prot: S2536_HUMAN, Q96CQ1 (See protein sequence)
Recommended Name: Solute carrier family 25 member 36  
Size: 311 amino acids; 34283 Da
Secondary accessions: A8MYF7 Q05CY1 Q9H0G8 Q9NVN5
Alternative splicing: 4 isoforms:  Q96CQ1-1   Q96CQ1-2   Q96CQ1-3   Q96CQ1-4   (Gene prediction based on EST data)

Explore the universe of human proteins at neXtProt for SLC25A36: NX_Q96CQ1

Explore proteomics data for SLC25A36 at MOPED

Post-translational modifications: 

  • Modification sites at neXtProt
  • Modification sites at PhosphoSitePlus

  • See SLC25A36 Protein Expression from SPIRE MOPED, PaxDB, and MaxQB

    REFSEQ proteins (2 alternative transcripts): 
    NP_001098117.1  NP_060625.2  

    ENSEMBL proteins: 
     ENSP00000401938   ENSP00000421470   ENSP00000320688   ENSP00000423319   ENSP00000391521  
     ENSP00000422265   ENSP00000424505   ENSP00000423711  

    SLC25A36 Human Recombinant Protein Products:

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    OriGene Protein Over-expression Lysate for SLC25A36
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    Novus Biologicals SLC25A36 Protein
    Novus Biologicals SLC25A36 Lysates
    Browse Sino Biological Recombinant Proteins
    Browse Sino Biological Cell Lysates
    Browse ProSpec Recombinant Proteins
    Cloud-Clone Corp. Proteins for SLC25A36

     
    Search eBioscience for Proteins for SLC25A36 

    SLC25A36 Antibody Products:

    Browse EMD Millipore's Extensive Line of Mono- and Polyclonal Antibodies
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    LSBio Antibodies in human, mouse, rat for SLC25A36

    SLC25A36 Assay Products:

    Browse Kits and Assays available from EMD Millipore
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    Cloud-Clone Corp. ELISAs for SLC25A36
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    Search eBioscience for ELISAs for SLC25A36 


    (According to HGNC, IUPHAR, InterPro, ProtoNet, UniProtKB, and/or BLOCKS, Sets of similar genes according to GeneDecks)
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    HGNC Gene Families:
    SLC: Solute carriers

    IUPHAR Guide to PHARMACOLOGY protein family classification: SLC25A36
    Miscellaneous SLC25 mitochondrial transporters

    3 InterPro protein domains:
     IPR002067 Mit_carrier
     IPR023395 Mt_carrier_dom
     IPR018108 Mitochondrial_sb/sol_carrier

    Graphical View of Domain Structure for InterPro Entry Q96CQ1

    ProtoNet protein and cluster: Q96CQ1

    UniProtKB/Swiss-Prot: S2536_HUMAN, Q96CQ1
    Similarity: Belongs to the mitochondrial carrier (TC 2.A.29) family
    Similarity: Contains 3 Solcar repeats


    Find genes that share domains with SLC25A36           About GenesLikeMe


    (According to 1UniProtKB, Genatlas, LifeMap Discovery™, IUBMB, and/or 2DME, Human phenotypes from GenomeRNAi, Animal models from MGI Mar 06 2013, inGenious Targeting Laboratory, genOway,
    transcription factor targeting from QIAGEN and/or HOMER, miRNA Gene Targets from miRTarBase, shRNA from OriGene, siRNAs from OriGene, QIAGEN, microRNA from QIAGEN, SwitchGear Genomics, Gene Editing from DNA2.0, Clones from OriGene, GenScript, Sino Biological, DNA2.0, Vector BioLabs and/or Addgene, Cell Lines from GenScript, ESI BIO, In Situ Hybridization Assays from Advanced Cell Diagnostics, Flow cytometry from eBioscience, Ontologies according to Gene Ontology Consortium 01 Apr 2014 via Entrez Gene.)
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    Phenotypes:
         1 GenomeRNAi human phenotype for SLC25A36:
     Increased gamma-H2AX phosphory 

         1 MGI phenotypic allele for Slc25a36 (no phenotypes)

    Find genes that share phenotypes with SLC25A36           About GenesLikeMe

    Animal Models:
       inGenious Targeting Laboratory: Let us create your new Knockout/Knockin mouse model for SLC25A36
       inGenious Targeting Laboratory: Contact us about creating complex and humanized mouse models for SLC25A36

       genOway customized KO model: permanent, tissue-specific or time-controlled inactivation for SLC25A36
       genOway customized Knockin model: humanization, point mutation, expression monitoring, etc. for SLC25A36

    miRNA
    Products:
        
    miRTarBase miRNAs that target SLC25A36:
    hsa-mir-222-3p (MIRT046573), hsa-mir-124-3p (MIRT022564)

    Block miRNA regulation of human, mouse, rat SLC25A36 using miScript Target Protectors
    Selected qRT-PCR Assays for microRNAs that regulate SLC25A36 (see all 77):
    hsa-miR-607 hsa-miR-4272 hsa-miR-106a hsa-miR-30d hsa-miR-30a hsa-miR-3622b-3p hsa-miR-93 hsa-miR-3613-3p
    SwitchGear 3'UTR luciferase reporter plasmidSLC25A36 3' UTR sequence
    Inhib. RNA
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    OriGene RNAi products in human, mouse, rat for SLC25A36
    Predesigned siRNA for gene silencing in human, mouse, rat SLC25A36

    Gene Editing
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    GenScript: all cDNA clones in your preferred vector (see all 2): SLC25A36 (NM_018155)
    Browse Sino Biological Human cDNA Clones
    DNA2.0 Custom Codon Optimized Gene Synthesis Service for SLC25A36
    Vector BioLabs ready-to-use adenovirus/AAV for human, mouse, rat SLC25A36

    Cell Line
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    Browse ESI BIO Cell Lines and PureStem Progenitors for SLC25A36 
    In Situ Assay
    Products:
       

     
    Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for SLC25A36


    (According to UniProtKB, COMPARTMENTS Subcellular localization database, Ontologies according to Gene Ontology Consortium 01 Apr 2014 via Entrez Gene.)
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    Subcellular locations from UniProtKB/Swiss-Prot
    S2536_HUMAN, Q96CQ1: Mitochondrion inner membrane; Multi-pass membrane protein (By similarity)
    Subcellular locations from COMPARTMENTS: 

    CompartmentConfidence
    mitochondrion5
    extracellular2
    cytosol1
    endoplasmic reticulum1
    nucleus1
    peroxisome1

    Gene Ontology (GO): 3 cellular component terms:    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0005739mitochondrion ----
    GO:0005743mitochondrial inner membrane IEA--
    GO:0016021integral component of membrane IEA--

    Find genes that share ontologies with SLC25A36           About GenesLikeMe


    (SuperPaths according to PathCards, Pathways according to R&D Systems, Cell Signaling Technology, KEGG, PharmGKB, BioSystems, Sino Biological, Reactome, Tocris Bioscience, GeneGo (Thomson Reuters), QIAGEN, and/or UniProtKB, Sets of similar genes according to GeneDecks, Interaction Networks according to QIAGEN, and/or STRING, Interactions according to 1UniProtKB, 2MINT, 3I2D, and/or 4STRING, with links to IntAct and Ensembl, Ontologies according to Gene Ontology Consortium 01 Apr 2014 via Entrez Gene).
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        Custom Pathway & Disease-focused RT2 Profiler PCR Arrays for SLC25A36
    Interactions:

        Search GeneGlobe Interaction Network for SLC25A36

    STRING Interaction Network Preview (showing 5 interactants - click image to see 19)

    Selected Interacting proteins for SLC25A36 (Q96CQ12, 3 ENSP000003915214) via UniProtKB, MINT, STRING, and/or I2D (see all 28)
    InteractantInteraction Details
    GeneCardExternal ID(s)
    PTNP212462, 3MINT-65121 I2D: score=5 
    SLC25A37Q9NYZ23, ENSP000002900754I2D: score=1 STRING: ENSP00000290075
    PIF1Q9H6113, ENSP000002680434I2D: score=1 STRING: ENSP00000268043
    FNBP1LQ5T0N53I2D: score=5 
    XPNPEP3Q9NQH73I2D: score=5 
    About this table

    Gene Ontology (GO): 3 biological process terms:    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0006810transport ----
    GO:0032355response to estradiol IDA15831516
    GO:0055085transmembrane transport IEA--

    Find genes that share ontologies with SLC25A36           About GenesLikeMe



    (Chemical Compounds according to UniProtKB, Enzo Life Sciences, EMD Millipore, Tocris Bioscience, ApexBio, HMDB, BitterDB, and/or Novoseek, Ligands according to IUPHAR, and Drugs according to DrugBank, Enzo Life Sciences, and/or PharmGKB)
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    Browse Small Molecules at EMD Millipore
       Browse drugs & compounds from Enzo Life Sciences
      Browse compounds at ApexBio 

    Browse Tocris compounds for SLC25A36 (S2536)



    (Secondary structures according to fRNAdb,
    GenBank/EMBL/DDBJ Accessions according to
    Unigene (Build 236 Homo sapiens; Apr 25 2013) or GenBank,
    RefSeq according to Entrez Gene,
    DOTS (version 10), and/or AceView, transcript ids from Ensembl with links to UCSC,
    exon structure from GeneLoc, alternative splicing isoforms according to ASD and/or ECgene,
    siRNAs from OriGene, QIAGEN, shRNA from OriGene, microRNA from QIAGEN, SwitchGear Genomics,
    Tagged/untagged cDNA clones from OriGene, GenScript, DNA2.0, Vector BioLabs, and/or Addgene, Primers from OriGene, and/or QIAGEN, Flow cytometry from eBioscience )
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    REFSEQ mRNAs for SLC25A36 gene (2 alternative transcripts): 
    NM_001104647.1  NM_018155.2  

    Unigene Cluster for SLC25A36:

    Solute carrier family 25 (pyrimidine nucleotide carrier ), member 36
    Hs.144130  [show with all ESTs]
    Unigene Representative Sequence: NM_001104647
    14 Ensembl transcripts including schematic representations, and UCSC links where relevant:
    ENST00000446041(uc003ets.2 uc003etr.2 uc003etq.2 uc011bmz.1)
    ENST00000502756 ENST00000393015 ENST00000515813 ENST00000507429(uc003etp.3)
    ENST00000324194 ENST00000502594 ENST00000453248 ENST00000513887 ENST00000512023
    ENST00000512506 ENST00000502866 ENST00000511757 ENST00000514629
    miRNA
    Products:
         
    Block miRNA regulation of human, mouse, rat SLC25A36 using miScript Target Protectors
    Selected qRT-PCR Assays for microRNAs that regulate SLC25A36 (see all 77):
    hsa-miR-607 hsa-miR-4272 hsa-miR-106a hsa-miR-30d hsa-miR-30a hsa-miR-3622b-3p hsa-miR-93 hsa-miR-3613-3p
    SwitchGear 3'UTR luciferase reporter plasmidSLC25A36 3' UTR sequence
    Inhib. RNA
    Products:
         
    OriGene RNAi products in human, mouse, rat for SLC25A36
    Predesigned siRNA for gene silencing in human, mouse, rat SLC25A36
    Clone
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    OriGene ORF clones in mouse, rat for SLC25A36
    OriGene custom cloning services - gene synthesis, subcloning, mutagenesis, variant library, vector shuttling
    GenScript: all cDNA clones in your preferred vector (see all 2): SLC25A36 (NM_018155)
    DNA2.0 Custom Codon Optimized Gene Synthesis Service for SLC25A36
    Vector BioLabs ready-to-use adenovirus/AAV for human, mouse, rat SLC25A36
    Primer
    Products:
        
    OriGene qPCR primer pairs and template standards for SLC25A36
    OriGene qSTAR qPCR primer pairs in human, mouse for SLC25A36
    Pre-validated RT2 qPCR Primer Assay in human, mouse, rat SLC25A36
      QuantiTect SYBR Green Assays in human, mouse, rat SLC25A36
      QuantiFast Probe-based Assays in human, mouse, rat SLC25A36

    Additional mRNA sequence: 

    AK001480.1 AK296785.1 AL049246.1 AL136803.1 BC014064.1 BC036272.1 

    15 DOTS entries:

    DT.445240  DT.86840691  DT.99945565  DT.101978551  DT.425173  DT.40308842  DT.120846524  DT.75183816 
    DT.120846539  DT.40114990  DT.95238588  DT.100784392  DT.120846519  DT.75175081  DT.92441397 

    Selected AceView cDNA sequences (see all 366):

    BF594417 AI803462 AW675586 AW151445 AI016593 BQ421230 AA251651 AA284368 
    AW276033 AI479348 CA447072 AA923724 BE612465 AI632755 AW007855 AI879084 
    AW592936 AA478847 AI627794 AW514918 AW779883 AI678624 AI569095 AI918718 

    GeneLoc Exon Structure

    Selected Alternative Splicing Database (ASD) splice patterns (SP) for SLC25A36 (see all 11)    About this scheme

    ExUns: 1a · 1b · 1c · 1d · 1e ^ 2 ^ 3a · 3b · 3c ^ 4 ^ 5a · 5b ^ 6 ^ 7a · 7b · 7c · 7d ^ 8 ^ 9a · 9b · 9c ^ 10a · 10b · 10c ^ 11a · 11b ·
    SP1:                                -                 -                 -     -     -     -     -     -     -     -                                             
    SP2:                                -                 -                 -     -     -     -     -     -     -     -                                             
    SP3:                                                  -                 -           -     -     -     -     -     -                                             
    SP4:                                                  -                 -     -     -                       -     -                                             
    SP5:                                -                 -                 -     -     -     -                                                                     

    ExUns: 11c
    SP1:      
    SP2:      
    SP3:      
    SP4:      
    SP5:      


    ECgene alternative splicing isoforms for SLC25A36

    (RNA expression data according to H-InvDB, NONCODE, miRBase, and RNAdb, Expression images according to data from BioGPS, Illumina Human BodyMap, and CGAP SAGE, Sets of similar genes according to GeneDecks, in vivo and in vitro expression data from LifeMap Discovery™, Protein expression images according to data from SPIRE 1MOPED, 2PaxDb, and 3MaxQB, plus additional links to SOURCE, and/or BioGPS, and/or UniProtKB,
    PCR Arrays from QIAGEN, Primers from OriGene, and/or QIAGEN, In Situ Hybridization Assays from Advanced Cell Diagnostics)
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    SLC25A36 expression in normal human tissues (normalized intensities)
    See probesets specificity/sensitivity at GeneAnnot
    About this imageBioGPS <intensity>2/3
    CGAP TAG: TAACTATTCT
    SLC25A36 Expression
    About this image


    SLC25A36 expression in embryonic tissues and stem cells    About this table
    Data from LifeMap, the Embryonic Development and Stem Cells Database
     selected tissues (see all 7) fully expand
     
     Endothelium (Cardiovascular System)
             Extraembryonic Angioblasts Extraembryonic Capillary Plexus
     
     Extraembryonic Mesoderm (Extraembryonic Tissues)
             Extraembryonic Angioblasts Extraembryonic Capillary Plexus
     
     Bone (Muscoskeletal System)
             Bone Marrow
     
     Thyroid (Endocrine System)
     
     Ovary (Reproductive System)
    SLC25A36 Protein expression data from MOPED1, PaxDb2 and MaxQB3    About this image

    SLC25A36 Protein Expression

    SOURCE GeneReport for Unigene cluster: Hs.144130

    UniProtKB/Swiss-Prot: S2536_HUMAN, Q96CQ1
    Tissue specificity: Expressed at moderate level

        Custom PCR Arrays for SLC25A36
    Primer
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    QuantiTect SYBR Green Assays in human, mouse, rat SLC25A36
    QuantiFast Probe-based Assays in human, mouse, rat SLC25A36
    In Situ
    Assay Products:
     

     
    Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for SLC25A36

    (Orthologs according to 1,2HomoloGene (2older version, for species not in 1newer version), 3euGenes, 4SGD , 5MGI Mar 06 2013, with possible further links to Flybase and/or WormBase, and/or 6Ensembl pan taxonomic compara , Gene Trees according to Ensembl and TreeFam)
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    This gene was present in the common ancestor of animals and fungi.

    Orthologs for SLC25A36 gene from Selected species (see all 20)    About this table
    Organism Taxonomic
    classification
    Gene Description Human
    Similarity
    Orthology
    Type
    Details
    mouse
    (Mus musculus)
    Mammalia Slc25a361 , 5 solute carrier family 25, member 361, 5 91.21(n)1
    96.14(a)1
      9 (50.84 cM)5
    1922871  NM_138756.41  NP_620095.11 
     970755975 
    chicken
    (Gallus gallus)
    Aves SLC25A361 solute carrier family 25 (pyrimidine nucleotide carrier more 82.64(n)
    90.03(a)
      424817  NM_001007960.1  NP_001007961.1 
    lizard
    (Anolis carolinensis)
    Reptilia SLC25A366
    solute carrier family 25 (pyrimidine nucleotide ca...
    89(a)
    1 ↔ 1
    GL343404.1(291211-329765)
    tropical clawed frog
    (Xenopus tropicalis)
    Amphibia Str.118252 Transcribed sequence with moderate similarity to protein more 75.91(n)    AL878542.2 
    zebrafish
    (Danio rerio)
    Actinopterygii slc25a36a1 solute carrier family 25, member 36a 75.78(n)
    86.82(a)
      436940  NM_001002667.1  NP_001002667.1 
    fruit fly
    (Drosophila melanogaster)
    Insecta CG183171 CG18317 55.93(n)
    59.06(a)
      33350  NM_001258911.2  NP_001245840.1 
    worm
    (Caenorhabditis elegans)
    Secernentea T09F3.21 T09F3.2 55.6(n)
    53.1(a)
      174602  NM_063835.5  NP_496236.1 
    baker's yeast
    (Saccharomyces cerevisiae)
    Saccharomycetes RIM2(YBR192W)4
    RIM21
    Mitochondrial pyrimidine nucleotide transporter; imports more4
    RIM21
    51.11(n)1
    43.67(a)1
      2(607652-608785)4
    8524911, 4  NP_009751.11, 4 


    ENSEMBL Gene Tree for SLC25A36 (if available)
    TreeFam Gene Tree for SLC25A36 (if available)

    (Paralogs according to 1HomoloGene,
    2Ensembl, and 3SIMAP, Pseudogenes according to 4Pseudogene.org Build 68)
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    Paralogs for SLC25A36 gene
    SLC25A332  
    5 SIMAP similar genes for SLC25A36 using alignment to 6 protein entries:     S2536_HUMAN (see all proteins):
    SLC25A33    SLC25A37    SLC25A45    SLC25A23    SLC25A32

    Find genes that share paralogs with SLC25A36           About GenesLikeMe


    1 Pseudogenes.org Pseudogene for SLC25A36
    PGOHUM00000234803


    (SNPs/Variants according to the 1NCBI SNP Database, 2Ensembl, 3PupaSUITE, 4UniProtKB, and DNA2.0, Linkage Disequilibrium by HapMap, Structural Variations(CNVs/InDels/Inversions) from the Database of Genomic Variants, Mutations from the Human Gene Mutation Database (HGMD), the Human Cytochrome P450 Allele Nomenclature Database, and the Locus Specific Mutation Databases (LSDB), Blood group antigen gene mutations by BGMUT, Resequencing Primers, Cancer Mutation PCR Arrays and Assays, and Copy Number PCR Arrays from QIAGEN)
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    Selected SNPs for SLC25A36 (see all 822)    About this table                                 

    Genomic DataTranscription Related DataAllele Frequencies
    SNP IDValidClinical
    significance
    Chr 3 posSequence#AA
    Chg
    TypeMore#Allele
    freq
    PopTotal
    sample
    More
    ----------
    rs2010972031,2
    --140658665(+) GTATA-/TTAAAA 2 -- us2k10--------
    rs1851952981,2
    --140659119(+) GACAAA/TCCACA 2 -- us2k10--------
    rs1896228621,2
    C--140659165(+) CCTAAC/TTGAAG 2 -- us2k10--------
    rs1419579041,2
    --140659183(+) ACAATG/TAACAG 2 -- us2k10--------
    rs1853167101,2
    --140659335(+) TTCAAC/TGGAAA 2 -- us2k10--------
    rs803432921,2
    F--140659385(+) AAGAAT/CTGTAA 2 -- us2k12Minor allele frequency- C:0.10CSA WA 120
    rs76205241,2
    C,F,A,H--140659454(+) aggtgC/Taagtg 2 -- us2k114Minor allele frequency- T:0.30NS NA WA 1704
    rs1133605591,2
    C,F--140659582(+) CTTACC/TATAGG 2 -- us2k11Minor allele frequency- T:0.50CSA 2
    rs1149376231,2
    F--140659637(+) TCACCA/GGAGAG 2 -- us2k11Minor allele frequency- G:0.06WA 118
    rs1838576471,2
    --140659827(+) AATAAC/TGTAAA 2 -- us2k10--------

    HapMap Linkage Disequilibrium report for SLC25A36 (140660662 - 140698785 bp)

    Structural Variations
         Database of Genomic Variants (DGV) 1 variation for SLC25A36:    About this table    
    Variant IDTypeSubtypePubMed ID
    nsv521218CNV Loss19592680

    Site Specific Mutation Identification with PCR Assays
    SeqTarget long-range PCR primers for resequencing SLC25A36
    DNA2.0 Custom Variant and Variant Library Synthesis for SLC25A36

    (in which this Gene is Involved, According to MalaCards, OMIM, UniProtKB, the University of Copenhagen DISEASES database, Genatlas, GeneTests, GAD, HuGE Navigator, and/or TGDB.)
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    Find genes that share disorders with SLC25A36           About GenesLikeMe

    Genetic Association Database (GAD): SLC25A36
    Human Genome Epidemiology (HuGE) Navigator: SLC25A36 (2 documents)

    Export disorders for SLC25A36 gene to outside databases

    (in PubMed. Associations of this gene to articles via 1Entrez Gene, 2UniProtKB/Swiss-Prot, 3HGNC, 4GAD, 5PharmGKB, 6HMDB, 7DrugBank, 8UniProtKB/TrEMBL, 9 Novoseek, and/or 10fRNAdb)
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    PubMed articles for SLC25A36 gene, integrated from 10 sources (see all 16):
    (articles sorted by number of sources associating them with SLC25A36)
        Utopia: connect your pdf to the dynamic
    world of online information

    1. Genetic variants in nuclear-encoded mitochondrial genes influence AIDS progression. (PubMed id 20877624)1, 4 Hendrickson S.L....O'Brien S.J. (PLoS ONE 2010)
    2. Genome-wide association analysis of susceptibility and clinical phenotype in multiple sclerosis. (PubMed id 19010793)1, 4 Baranzini S.E....Oksenberg J.R. (Hum. Mol. Genet. 2009)
    3. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PubMed id 14702039)1, 2 Ota T.... Sugano S. (Nat. Genet. 2004)
    4. The mitochondrial transporter family SLC25: identification, properties and physiopathology. (PubMed id 23266187)1 Palmieri F. (Mol. Aspects Med. 2013)
    5. Pilot genome-wide association search identifies potential loci for risk of erectile dysfunction in type 1 diabetes using the DCCT/EDIC study cohort. (PubMed id 22704111)1 Hotaling J.M....Wessells H. (J. Urol. 2012)
    6. Replication of top markers of a genome-wide association study in multiple sclerosis in Spain. (PubMed id 20944657)1 Cavanillas M.L....Urcelay E. (Genes Immun. 2011)
    7. Systematic and quantitative assessment of the ubiquitin-modified proteome. (PubMed id 21906983)1 Kim W....Gygi S.P. (Mol. Cell 2011)
    8. Differential expression profile prioritization of positional candidate glaucoma genes: the GLC1C locus. (PubMed id 17210862)2 Rozsa F.W....Richards J.E. (Arch. Ophthalmol. 2007)
    9. The DNA sequence, annotation and analysis of human chromosome 3. (PubMed id 16641997)2 Muzny D.M....Gibbs R.A. (Nature 2006)
    10. Diversification of transcriptional modulation: large-scale identification and characterization of putative alternative promoters of human genes. (PubMed id 16344560)1 Kimura K.... Sugano S. (Genome Res. 2006)

    (in PubMed, OMIM, and NCBI Bookshelf)
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     ANDOR
    Aliases
    Free Text  

      Query String
    PubMed
    OMIM
    NCBI Bookshelf
      (Note: In FireFox, select the above section and copy using Ctrl-C)

    (According to Entrez Gene, HGNC, AceView, euGenes, Ensembl, miRBase, ECgene, Kegg, and/or H-InvDB)
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    Entrez Gene: 55186 HGNC: 25554 AceView: FLJ10618 Ensembl:ENSG00000114120 euGenes: HUgn55186
    ECgene: SLC25A36 H-InvDB: SLC25A36

    (According to HUGE)
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      --

    (According to PharmGKB, ATLAS, HORDE, IMGT, LEIDEN, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL, and/or others, e.g. Wikipedia and GeneReviews, via UniProtKB/Swiss-Prot)
    About This Section

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    NameDescription
    PharmGKB entry for SLC25A36 Pharmacogenomics, SNPs, Pathways

    (Patent information from GeneIP,
    Licensable technologies from WIS Yeda, Salk, Tufts,
    IP news from LifeMap Sciences, Inc.)
    About This Section

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    Patent Information for SLC25A36 gene:
    Search GeneIP for patents involving SLC25A36

    GeneCards and IP:
    Japan Patent Office Licenses GeneCards     European Patent Office Licenses GeneCards     Improving the IP Search



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