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Aliases for SLC25A34 Gene

Aliases for SLC25A34 Gene

  • Solute Carrier Family 25, Member 34 2 3

External Ids for SLC25A34 Gene

Summaries for SLC25A34 Gene

Entrez Gene Summary for SLC25A34 Gene

  • SLC25A34 belongs to the SLC25 family of mitochondrial carrier proteins (Haitina et al., 2006 [PubMed 16949250]).[supplied by OMIM, Mar 2008]

GeneCards Summary for SLC25A34 Gene

SLC25A34 (Solute Carrier Family 25, Member 34) is a Protein Coding gene. An important paralog of this gene is SLC25A35.

No data available for UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for SLC25A34 Gene

Genomics for SLC25A34 Gene

Genomic Location for SLC25A34 Gene

Start:
15,736,226 bp from pter
End:
15,741,396 bp from pter
Size:
5,171 bases
Orientation:
Plus strand

Genomic View for SLC25A34 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for SLC25A34 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for SLC25A34 Gene

Regulatory Elements for SLC25A34 Gene

Proteins for SLC25A34 Gene

  • Protein details for SLC25A34 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Q6PIV7-S2534_HUMAN
    Recommended name:
    Solute carrier family 25 member 34
    Protein Accession:
    Q6PIV7
    Secondary Accessions:
    • Q68DV0

    Protein attributes for SLC25A34 Gene

    Size:
    304 amino acids
    Molecular mass:
    32224 Da
    Quaternary structure:
    No Data Available

neXtProt entry for SLC25A34 Gene

Proteomics data for SLC25A34 Gene at MOPED

Post-translational modifications for SLC25A34 Gene

No Post-translational modifications

Other Protein References for SLC25A34 Gene

ENSEMBL proteins:
REFSEQ proteins:

No data available for DME Specific Peptides for SLC25A34 Gene

Domains for SLC25A34 Gene

Gene Families for SLC25A34 Gene

Protein Domains for SLC25A34 Gene

UniProtKB/Swiss-Prot:

S2534_HUMAN
Family:
  • Belongs to the mitochondrial carrier (TC 2.A.29) family.:
    • Q6PIV7
Similarity:
  • Contains 3 Solcar repeats.:
    • Q6PIV7
genes like me logo Genes that share domains with SLC25A34: view

Function for SLC25A34 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for SLC25A34 Gene

Localization for SLC25A34 Gene

Subcellular locations from UniProtKB/Swiss-Prot for SLC25A34 Gene

Mitochondrion inner membrane; Multi-pass membrane protein.

Subcellular locations from

COMPARTMENTS
Jensen Localization Image for SLC25A34 Gene COMPARTMENTS Subcellular localization image for SLC25A34 gene
Compartment Confidence
mitochondrion 5
plasma membrane 3
extracellular 1
lysosome 1
peroxisome 1

Gene Ontology (GO) - Cellular Components for SLC25A34 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005739 mitochondrion --
GO:0005743 mitochondrial inner membrane IEA --
GO:0016021 integral component of membrane IEA --
genes like me logo Genes that share ontologies with SLC25A34: view

Pathways for SLC25A34 Gene

SuperPathways for SLC25A34 Gene

No Data Available

Gene Ontology (GO) - Biological Process for SLC25A34 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0006810 transport IEA --
genes like me logo Genes that share ontologies with SLC25A34: view

No data available for Pathways by source for SLC25A34 Gene

Transcripts for SLC25A34 Gene

Unigene Clusters for SLC25A34 Gene

Solute carrier family 25, member 34:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for SLC25A34 Gene

No ASD Table

Relevant External Links for SLC25A34 Gene

GeneLoc Exon Structure for
SLC25A34
ECgene alternative splicing isoforms for
SLC25A34

Expression for SLC25A34 Gene

mRNA expression in normal human tissues for SLC25A34 Gene

mRNA expression in embryonic tissues and stem cells from LifeMap Discovery

mRNA differential expression in normal tissues according to GTEx for SLC25A34 Gene

This gene is overexpressed in Muscle - Skeletal (7.6).

SOURCE GeneReport for Unigene cluster for SLC25A34 Gene Hs.631867

genes like me logo Genes that share expressions with SLC25A34: view

Orthologs for SLC25A34 Gene

This gene was present in the common ancestor of animals and fungi.

Orthologs for SLC25A34 Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia SLC25A34 36
  • 99.23 (n)
  • 99.01 (a)
SLC25A34 37
  • 99 (a)
OneToOne
cow
(Bos Taurus)
Mammalia SLC25A34 36
  • 88.71 (n)
  • 91.12 (a)
SLC25A34 37
  • 91 (a)
OneToOne
dog
(Canis familiaris)
Mammalia SLC25A34 36
  • 88.23 (n)
  • 91.09 (a)
SLC25A34 37
  • 87 (a)
OneToOne
mouse
(Mus musculus)
Mammalia Slc25a34 36
  • 86.03 (n)
  • 88.78 (a)
Slc25a34 16
Slc25a34 37
  • 85 (a)
OneToOne
oppossum
(Monodelphis domestica)
Mammalia SLC25A34 37
  • 77 (a)
OneToOne
platypus
(Ornithorhynchus anatinus)
Mammalia SLC25A34 37
  • 71 (a)
OneToOne
rat
(Rattus norvegicus)
Mammalia Slc25a34 36
  • 86.27 (n)
  • 89.37 (a)
lizard
(Anolis carolinensis)
Reptilia SLC25A34 37
  • 72 (a)
OneToOne
tropical clawed frog
(Silurana tropicalis)
Amphibia slc25a34 36
  • 70.12 (n)
  • 73.24 (a)
zebrafish
(Danio rerio)
Actinopterygii CABZ01052268.1 37
  • 42 (a)
OneToOne
slc25a34 36
  • 66.55 (n)
  • 61.86 (a)
fruit fly
(Drosophila melanogaster)
Insecta CG18324 37
  • 42 (a)
ManyToMany
CG18327 37
  • 42 (a)
ManyToMany
CG8323 36
  • 54.77 (n)
  • 46.29 (a)
CG8323 37
  • 45 (a)
ManyToMany
baker's yeast
(Saccharomyces cerevisiae)
Saccharomycetes OAC1 36
  • 42.96 (n)
  • 38.99 (a)
OAC1 37
  • 33 (a)
OneToMany
OAC1 39
K. lactis yeast
(Kluyveromyces lactis)
Saccharomycetes KLLA0B12826g 36
  • 48.12 (n)
  • 42.55 (a)
bread mold
(Neurospora crassa)
Ascomycetes NCU07884 36
  • 51.58 (n)
  • 40 (a)
fission yeast
(Schizosaccharomyces pombe)
Schizosaccharomycetes oac1 36
  • 44.64 (n)
  • 35.34 (a)
Species with no ortholog for SLC25A34:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rainbow trout (Oncorhynchus mykiss)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)

Evolution for SLC25A34 Gene

ENSEMBL:
Gene Tree for SLC25A34 (if available)
TreeFam:
Gene Tree for SLC25A34 (if available)

Paralogs for SLC25A34 Gene

Paralogs for SLC25A34 Gene

Selected SIMAP similar genes for SLC25A34 Gene using alignment to 1 proteins:

genes like me logo Genes that share paralogs with SLC25A34: view

Variants for SLC25A34 Gene

Sequence variations from dbSNP and Humsavar for SLC25A34 Gene

SNP ID Clin Chr 01 pos Sequence Context AA Info Type MAF
rs937592 -- 15,737,916(-) AGCAG(A/G)GAGGA intron-variant
rs1108185 -- 15,737,649(-) AATGA(C/T)CCTCC intron-variant
rs4623694 -- 15,735,286(+) CCTGG(C/G)AGGTG upstream-variant-2KB
rs5772650 -- 15,737,570(+) GCCTC(-/A)AAAAA intron-variant
rs6701500 -- 15,737,203(+) CCTCC(G/T)CCTCG intron-variant

Structural Variations from Database of Genomic Variants (DGV) for SLC25A34 Gene

Variant ID Type Subtype PubMed ID
dgv171n71 CNV Gain 21882294
nsv524044 CNV Loss 19592680
dgv11n27 CNV Gain 19166990
dgv172n71 CNV Gain 21882294
nsv508925 CNV Insertion 20534489
dgv173n71 CNV Loss 21882294
nsv871462 CNV Gain+Loss 21882294
nsv871550 CNV Loss 21882294
nsv870503 CNV Loss 21882294

Relevant External Links for SLC25A34 Gene

HapMap Linkage Disequilibrium report
SLC25A34

Disorders for SLC25A34 Gene

Relevant External Links for SLC25A34

Genetic Association Database (GAD)
SLC25A34
Human Genome Epidemiology (HuGE) Navigator
SLC25A34
genes like me logo Genes that share disorders with SLC25A34: view

No data available for UniProtKB/Swiss-Prot for SLC25A34 Gene

Publications for SLC25A34 Gene

  1. Fourteen novel human members of mitochondrial solute carrier family 25 (SLC25) widely expressed in the central nervous system. (PMID: 16949250) Haitina T. … Fredriksson R. (Genomics 2006) 3 4
  2. Genetic variants in nuclear-encoded mitochondrial genes influence AIDS progression. (PMID: 20877624) Hendrickson S.L. … O'Brien S.J. (PLoS ONE 2010) 3 49
  3. The mitochondrial transporter family SLC25: identification, properties and physiopathology. (PMID: 23266187) Palmieri F. (Mol. Aspects Med. 2013) 3
  4. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PMID: 15489334) Gerhard D.S. … Malek J. (Genome Res. 2004) 4
  5. The DNA sequence and biological annotation of human chromosome 1. (PMID: 16710414) Gregory S.G. … Bentley D.R. (Nature 2006) 4

Products for SLC25A34 Gene

  • antibodies-online peptides for SLC25A34
  • antibodies-online antibodies for SLC25A34
  • antibodies-online kits for SLC25A34

Sources for SLC25A34 Gene

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