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Aliases for SLC25A30-AS1 Gene

Subcategory (RNA class) for SLC25A30-AS1 Gene

non-coding RNA

Quality Score for this RNA gene is


Aliases for SLC25A30-AS1 Gene

  • SLC25A30 Antisense RNA 1 2 3 5
  • SLC25A30 Antisense RNA 1 (Non-Protein Coding) 2 3
  • XXyac-YMR12DG2.1 3

External Ids for SLC25A30-AS1 Gene

Previous GeneCards Identifiers for SLC25A30-AS1 Gene

  • GC13P045993

Summaries for SLC25A30-AS1 Gene

GeneCards Summary for SLC25A30-AS1 Gene

SLC25A30-AS1 (SLC25A30 Antisense RNA 1) is an RNA Gene, and is affiliated with the non-coding RNA class.

Additional gene information for SLC25A30-AS1 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for SLC25A30-AS1 Gene

Genomics for SLC25A30-AS1 Gene

Regulatory Elements for SLC25A30-AS1 Gene

Enhancers for SLC25A30-AS1 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH13H045394 0.9 Ensembl ENCODE 22.5 -22.0 -22043 2.7 ETV1 ZIC2 PRDM6 GATA2 MYNN BCL6B SCRT2 ZNF512 GLIS1 ZNF600 SLC25A30-AS1 SLC25A30 PPIAP25 COG3 TPT1-AS1 RCN1P2
GH13H045444 1.2 ENCODE dbSUPER 13.8 +29.5 29508 5.7 FOXA2 ATF1 MLX ZFP64 ARID4B YY1 SLC30A9 ATF7 SP5 REST SLC25A30 SLC25A30-AS1 TPT1-AS1 PPIAP25 COG3
GH13H045499 1.3 Ensembl ENCODE dbSUPER 12.5 +82.3 82324 2.8 FOXA2 JUN CEBPG RARA ZNF316 POLR2A FOS MAFK SOX6 MAFG COG3 PPIAP25 SLC25A30-AS1 SLC25A30 TPT1-AS1 GC13M045553
GH13H045324 1.3 Ensembl ENCODE 11.1 -87.5 -87469 11.8 FOXA2 PKNOX1 ATF1 FEZF1 ZNF2 YY1 ZNF121 GLIS2 FOS ATF7 SLC25A30 TPT1-AS1 SLC25A30-AS1 SNORA31B GC13P045300
GH13H045439 1.4 Ensembl ENCODE dbSUPER 9.6 +22.7 22704 3.1 FOXA2 ARID4B YY1 RUNX3 JUNB REST PPARG KAT8 NFIL3 MIER3 COG3 SLC25A30-AS1 SLC25A30 TPT1-AS1 PPIAP25
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around SLC25A30-AS1 on UCSC Golden Path with GeneCards custom track

Promoters for SLC25A30-AS1 Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters
ENSR00000062308 -162 2400 HDGF PKNOX1 ATF1 ZFP64 ARID4B SIN3A YY1 SLC30A9 GLIS2 ATF7

Genomic Locations for SLC25A30-AS1 Gene

Genomic Locations for SLC25A30-AS1 Gene
2,210 bases
Plus strand

Genomic View for SLC25A30-AS1 Gene

Genes around SLC25A30-AS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
SLC25A30-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for SLC25A30-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for SLC25A30-AS1 Gene

Proteins for SLC25A30-AS1 Gene

Post-translational modifications for SLC25A30-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for SLC25A30-AS1 Gene

Domains & Families for SLC25A30-AS1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for SLC25A30-AS1 Gene

Function for SLC25A30-AS1 Gene

Phenotypes From GWAS Catalog for SLC25A30-AS1 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for SLC25A30-AS1 Gene

Localization for SLC25A30-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for SLC25A30-AS1 Gene

Pathways & Interactions for SLC25A30-AS1 Gene

SuperPathways for SLC25A30-AS1 Gene

No Data Available

Interacting Proteins for SLC25A30-AS1 Gene

Gene Ontology (GO) - Biological Process for SLC25A30-AS1 Gene


No data available for Pathways by source and SIGNOR curated interactions for SLC25A30-AS1 Gene

Drugs & Compounds for SLC25A30-AS1 Gene

No Compound Related Data Available

Transcripts for SLC25A30-AS1 Gene

mRNA/cDNA for SLC25A30-AS1 Gene

(2) Additional mRNA sequences :
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for SLC25A30-AS1 Gene

SLC25A30 antisense RNA 1:
Representative Sequences:

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for SLC25A30-AS1 Gene

No ASD Table

Relevant External Links for SLC25A30-AS1 Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for SLC25A30-AS1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for SLC25A30-AS1 Gene

SOURCE GeneReport for Unigene cluster for SLC25A30-AS1 Gene:

genes like me logo Genes that share expression patterns with SLC25A30-AS1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for SLC25A30-AS1 Gene

Orthologs for SLC25A30-AS1 Gene

Evolution for SLC25A30-AS1 Gene

Gene Tree for SLC25A30-AS1 (if available)
Gene Tree for SLC25A30-AS1 (if available)

No data available for Orthologs for SLC25A30-AS1 Gene

Paralogs for SLC25A30-AS1 Gene

No data available for Paralogs for SLC25A30-AS1 Gene

Variants for SLC25A30-AS1 Gene

Sequence variations from dbSNP and Humsavar for SLC25A30-AS1 Gene

SNP ID Clin Chr 13 pos Sequence Context AA Info Type
rs1000123052 -- 45,419,958(+) GAAAA(A/G)GAAAG intron-variant, upstream-variant-2KB
rs1000496876 -- 45,416,301(+) TATTC(A/G)GGAGG intron-variant, upstream-variant-2KB
rs1001137376 -- 45,420,698(+) TGTGC(-/TTTTG)TTTTG intron-variant, downstream-variant-500B
rs1002467150 -- 45,419,286(+) ATGGC(A/G)GTGTT intron-variant, upstream-variant-2KB
rs1002498424 -- 45,419,546(+) ACTCC(C/T)GACCT intron-variant, upstream-variant-2KB

Structural Variations from Database of Genomic Variants (DGV) for SLC25A30-AS1 Gene

Variant ID Type Subtype PubMed ID
nsv561578 CNV loss 21841781
nsv510579 CNV deletion 20534489
nsv455875 CNV loss 19166990
esv3631957 CNV loss 21293372
dgv223e201 CNV deletion 23290073

Relevant External Links for SLC25A30-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for SLC25A30-AS1 Gene

Disorders for SLC25A30-AS1 Gene

Relevant External Links for SLC25A30-AS1

Atlas of Genetics and Cytogenetics in Oncology and Haematology:

No disorders were found for SLC25A30-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for SLC25A30-AS1 Gene

Publications for SLC25A30-AS1 Gene

  1. Normalization and subtraction: two approaches to facilitate gene discovery. (PMID: 8889548) Bonaldo MF … Soares MB (Genome research 1996) 3 60

Products for SLC25A30-AS1 Gene

Sources for SLC25A30-AS1 Gene

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