SLC25A24 Gene
protein-coding GIFtS: 51
GCID: GC01M108677
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solute carrier family 25 (mitochondrial carrier; phosphate...
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Aliases for SLC25A24 gene
(According to
1HGNC,
2Entrez Gene,
3UniProtKB/Swiss-Prot,
4UniProtKB/TrEMBL, 5OMIM, 6GeneLoc,
7Ensembl,
8DME,
9miRBase,
and/or 10fRNAdb) About This Section
|
| Aliases |
|---|
| Solute Carrier Family 25 (Mitochondrial Carrier; Phosphate Carrier), Member241 2 | | Calcium-Binding Mitochondrial Carrier Protein SCaMC-12 | | APC11 2 3 | | Calcium-Binding Transporter2 | | Mitochondrial ATP-Mg/Pi Carrier Protein 12 3 | | Short Calcium-Binding Mitochondrial Carrier 12 | | Mitochondrial Ca(2+)-Dependent Solute Carrier Protein 12 3 | | MCSC13 | | Small Calcium-Binding Mitochondrial Carrier Protein 12 3 | | SCAMC13 | | DKFZp586G01231 | | Solute Carrier Family 25 Member 243 | | SCAMC-12 | | |
Export aliases for SLC25A24 gene to outside databasesPrevious GC identifers: GC01M108033 GC01M108389 GC01M106625 |
Summaries for SLC25A24 gene(According to Entrez Gene,
Tocris Bioscience,
Wikipedia's
Gene Wiki,
PharmGKB,
UniProtKB/Swiss-Prot,
and/or
UniProtKB/TrEMBL)
About This Section
| Entrez Gene summary for SLC25A24: This gene encodes a carrier protein that transports ATP-Mg exchanging it for phosphate. Multiple transcript variantsencoding different isoforms have been found for this gene. (provided by RefSeq, May 2012) UniProtKB/Swiss-Prot: SCMC1_HUMAN, Q6NUK1Function: Calcium-dependent mitochondrial solute carrier. Mitochondrial solute carriers shuttle metabolites,nucleotides, and cofactors through the mitochondrial inner membrane. May act as a ATP-Mg/Pi exchanger that mediatesthe transport of Mg-ATP in exchange for phosphate, catalyzing the net uptake or efflux of adenine nucleotides into orfrom the mitochondria
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Genomic Views for SLC25A24 gene
(According to
GeneLoc and/or
HGNC, and/or
Entrez Gene (NCBI build 37),
and/or miRBase,
Genomic Views according to
UCSC (hg19) and
Ensembl (release 69),
Regulatory elements and Epigenetics data according to
QIAGEN,
SABiosciences, and/or
SwitchGear Genomics) About This Section
| RefSeq DNA sequence:- NC_000001.10 NC_018912.1 NT_032977.9
Regulatory elements: SABiosciences Regulatory transcription factor binding sites in the SLC25A24 gene promoter: POU2F2 (Oct-2.1) Oct-B1 oct-B3 oct-B2 FOXL1 POU2F2 POU2F2C POU2F1 POU2F1a POU2F2B Other transcription factors
Search SABiosciences Chromatin IP Primers for SLC25A24
Epigenetics:
|  | QIAGEN PyroMark CpG Assay predesigned Pyrosequencing DNA Methylation assays in human, mouse, rat SLC25A24 |
Genomic Location: Genomic View: UCSC Golden Path with GeneCards custom track
Entrez Gene cytogenetic band: 1p13.3 Ensembl cytogenetic band: 1p13.3 HGNC cytogenetic band: 1p13.2SLC25A24 Gene in genomic location: bands according to Ensembl, locations according to
(and/or Entrez Gene and/or Ensembl if different)

GeneLoc information about chromosome 1 GeneLoc Exon Structure GeneLoc location for GC01M108677: view genomic region
(about GC identifiers)
Start:
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108,676,658 bp from pter |
End:
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108,743,471 bp from pter |
Size:
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66,814 bases |
Orientation:
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minus strand |
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Proteins for SLC25A24 gene
(According to
1UniProtKB,
HORDE,
neXtProt,
Ensembl,
and/or Reactome,
Modification sites according to 2PhosphoSitePlus,
Specific Peptides from DME,
Protein expression images according to data from SPIRE MOPED and PaxDb,
RefSeq according to NCBI,
PDB rendering according to OCA and/or Proteopedia,
Recombinant Proteins
from
EMD Millipore,
R&D Systems,
GenScript,
Enzo Life Sciences,
OriGene,
Novus Biologicals,
Sino Biological,
ProSpec, and/or
Uscn,
Biochemical Assays by
EMD Millipore,
R&D Systems,
OriGene,
GenScript,
Cell Signaling Technology,
Enzo Life Sciences, and/or
Uscn,
Ontologies according to Gene
Ontology Consortium 01 Mar 2013 and
Entrez Gene,
Antibodies by
EMD Millipore,
R&D Systems,
GenScript,
Cell Signaling Technology,
OriGene,
Novus Biologicals,
Thermo Fisher Scientific,
Abcam, and/or
Uscn)
About This Section
| UniProtKB/Swiss-Prot: SCMC1_HUMAN, Q6NUK1 (See
protein sequence)Recommended Name: Calcium-binding mitochondrial carrier protein SCaMC-1 Size: 477 amino acids; 53354 Da
Subcellular location: Mitochondrion inner membrane; Multi-pass membrane protein
Sequence caution: Sequence=AAF28888.1; Type=Frameshift; Positions=418, 464; Sequence=CAI13622.1; Type=Erroneous genemodel prediction; Sequence=CAI14512.1; Type=Erroneous gene model prediction;
Secondary accessions: B7ZAI9 Q5T331 Q5T485 Q6PJJ9 Q705K4 Q9P129Alternative splicing: 2 isoforms: Q6NUK1-1 Q6NUK1-2 Explore the universe of human proteins at neXtProt for SLC25A24: NX_Q6NUK1
Post-translational modifications:
View modification sites using PhosphoSitePlus2View neXtProt modification sites for NX_Q6NUK1 SLC25A24 Protein expression data from MOPED and PaxDb: About this image 
REFSEQ proteins (2 alternative transcripts):
NP_037518.3 NP_998816.1 ENSEMBL proteins: ENSP00000457733 ENSP00000264128 ENSP00000359058 ENSP00000454393 Human Recombinant Protein Products:
Gene Ontology (GO): 4 cellular component terms (GO ID links to tree view): About this table
SLC25A24 for ontologies About GeneDecksing
SLC25A24 Antibody Products: Assay Products for SLC25A24: |
Protein
Domains / Families for SLC25A24 gene(According to InterPro, ProtoNet,
UniProtKB, and/or BLOCKS,
Sets of similar genes according to GeneDecks)
About This Section
|
SLC25A24 for domains About GeneDecksing
5/7 InterPro domains/families (see all 7):Graphical View of Domain Structure for InterPro Entry Q6NUK1ProtoNet protein and cluster: Q6NUK1 1 Blocks protein family: IPB002067 Mitochondrial carrier protein signature
UniProtKB/Swiss-Prot: SCMC1_HUMAN, Q6NUK1Similarity: Belongs to the mitochondrial carrier (TC 2.A.29) familySimilarity: Contains 4 EF-hand domainsSimilarity: Contains 3 Solcar repeats |
Function for SLC25A24 gene
(According to 1UniProtKB,
Genatlas,
LifeMap Discovery™,
IUBMB, and/or
2DME,
Human phenotypes from GenomeRNAi,
Animal models from MGI Mar 06 2013,
bound targets from SABiosciences,
miRNA Gene Targets from miRTarBase
shRNA from
OriGene,
RNAi from
EMD Millipore,
siRNAs from
OriGene,
QIAGEN,
microRNA from QIAGEN,
Gene Editing from DNA2.0,
Clones from EMD Millipore,
OriGene,
SwitchGear Genomics,
GenScript,
Sino Biological,
DNA2.0,
and Vector BioLabs,
Cell Lines from GenScript,
LifeMap BioReagents,
In Situ Hybridization Assays from Advanced Cell Diagnostics,
Ontologies according to Gene Ontology Consortium 01 Mar 2013 via
Entrez Gene.)
About This Section
| Function Summary: UniProtKB/Swiss-Prot: SCMC1_HUMAN, Q6NUK1Function: Calcium-dependent mitochondrial solute carrier. Mitochondrial solute carriers shuttle metabolites,nucleotides, and cofactors through the mitochondrial inner membrane. May act as a ATP-Mg/Pi exchanger that mediatesthe transport of Mg-ATP in exchange for phosphate, catalyzing the net uptake or efflux of adenine nucleotides into orfrom the mitochondriaBiophysicochemical properties: Kinetic parameters: KM=0.97 mM for AMP; KM=0.3 mM for ADP; KM=0.33 mM for ATP; KM=0.2 mMfor ATP-Mg; KM=1.64 mM for Pi; Vmax=337 umol/min/g enzyme with AMP as substrate; Vmax=345 umol/min/g enzyme with ADPas substrate; Vmax=320 umol/min/g enzyme with ATP as substrate; Vmax=365 umol/min/g enzyme with ATP-Mg as substrate;Vmax=380 umol/min/g enzyme with Pi as substrate;
Clone Products: |  | Browse Clones for the Expression of Recombinant Proteins Available from EMD Millipore | |  | OriGene Myc/DDK tagged cDNA clones in CMV expression vector in human, mouse, rat for SLC25A24 (see all 4) OriGene untagged cDNA clones in CMV expression vector in human, mouse, rat for SLC25A24 (see all 3) OriGene custom cloning services – gene synthesis, subcloning, mutagenesis,
variant library, vector shuttling 
| |  | GenScript: all cDNA clones in your preferred vector (see all 2): SLC25A24 (NM_013386) | |  | Browse Sino Biological Human cDNA Clones | |  | DNA2.0 Custom Codon Optimized Gene
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In Situ Assay Products: |
| Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for SLC25A24 |
Gene Ontology (GO): 1 molecular function term (GO ID links to tree view): About this table | GO ID | Qualified GO term | Evidence | PubMed IDs |
|---|
| GO:0005509 | calcium ion binding |
IEA | -- |
SLC25A24 for ontologies About GeneDecksing
|
Pathways & Interactions for SLC25A24 gene
(Pathways according to
EMD Millipore,
R&D Systems,
Cell Signaling Technology,
KEGG,
PharmGKB,
BioSystems,
Reactome,
Tocris Bioscience,
GeneGo (Thomson Reuters),
QIAGEN,
and/or UniProtKB,
Sets of similar genes according to GeneDecks,
Interaction Networks according to
SABiosciences,
and/or STRING,
Interactions according to 1UniProtKB,
2MINT,
3I2D, and/or
4STRING,
with links to IntAct and
Ensembl,
Ontologies according to Gene Ontology Consortium 01 Mar 2013 via
Entrez Gene).
About This Section
|
Interactions:
Search SABiosciences Gene Network CentralTM Interacting Genes and Proteins Networks for SLC25A24
STRING Interaction
Network Preview (showing 2 interactants - click image to see more details)
 5/6 Interacting proteins for SLC25A24 (Q6NUK12 ENSP000002641284) via UniProtKB, MINT, STRING, and/or I2D (see all 6)About this table
Gene Ontology (GO): 1 biological process term (GO ID links to tree view): About this table | GO ID | Qualified GO term | Evidence | PubMed IDs |
|---|
| GO:0055085 | transmembrane transport |
IEA | -- |
SLC25A24 for ontologies About GeneDecksing
|
Drugs & Compounds for SLC25A24 gene(Chemical Compounds according to UniProtKB, Enzo Life Sciences,
EMD Millipore, Tocris Bioscience
HMDB,
BitterDB, and/or
Novoseek, and Drugs according to
DrugBank,
Enzo Life Sciences, and/or
PharmGKB, with drugs/clinical trials/news
search links to CenterWatch)
About This Section
|
Browse Tocris compounds for SLC25A24
1 HMDB Compound for SLC25A24 About this table Search CenterWatch for drugs/clinical trials and news about SLC25A24 / SCMC1 
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Transcripts for SLC25A24 gene(Secondary structures according to
fRNAdb,
GenBank/EMBL/DDBJ Accessions according to
Unigene
(Build 235 Homo sapiens; Mar 10 2013) or GenBank, RefSeq according to Entrez Gene,
DOTS (version 10), and/or
AceView,
transcript ids from Ensembl
with links to UCSC,
exon structure from GeneLoc,
alternative splicing isoforms according to ASD and/or
ECgene,
RNAi Products from
EMD Millipore,
siRNAs from
OriGene,
QIAGEN,
shRNA from
OriGene,
microRNA from QIAGEN,
Tagged/untagged cDNA clones from
OriGene,
SwitchGear Genomics,
GenScript,
DNA2.0,
Vector BioLabs,
Primers from
OriGene,
SABiosciences, and/or
QIAGEN
) About This Section
| REFSEQ mRNAs for SLC25A24 gene (2 alternative transcripts): NM_013386.4 NM_213651.2 Unigene Cluster for SLC25A24: Solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 24 Hs.656870 [show with all ESTs]Unigene Representative Sequence: NM_0133864 Ensembl transcripts including schematic representations, and UCSC links where relevant: ENST00000565488(uc001dvn.4) ENST00000264128 ENST00000370041(uc001dvm.3) ENST00000569674
Clone Products: |  | OriGene Myc/DDK tagged cDNA clones in CMV expression vector in human, mouse, rat for SLC25A24 (see all 4) OriGene untagged cDNA clones in CMV expression vector in human, mouse, rat for SLC25A24 (see all 3) OriGene custom cloning services – gene synthesis, subcloning, mutagenesis,
variant library, vector shuttling 
| |  | GenScript: all cDNA clones in your preferred vector (see all 2): SLC25A24 (NM_013386) | |  | DNA2.0 Custom Codon Optimized Gene
Synthesis Service for SLC25A24 | |  | Vector BioLabs ready-to-use adenovirus/AAV for human, mouse, rat SLC25A24  |
Additional cDNA sequence: AF123303.1 AJ619961.1 AJ619987.1 AK292567.1 AK304165.1 AK316304.1 AK316506.1 AL050209.1 BC014519.1 BC029377.1 BC068010.1 BC068561.1 7 DOTS entries: DT.121377993 DT.113065 DT.86856186 DT.426021 DT.95173708 DT.121378013 DT.95081389 24/132 AceView cDNA sequences (see all 132): AA181615 BQ637518 BQ685792 BM984763 H01323 AI061119 BF447395 CA311758 AJ619961 NM_213651 BG623074 BX101315 AL050209 BF445689 NM_013386 BX105317 BQ688961 CA393532 BG779437 AW673211 BX505986 BQ962873 AW057833 CD251819 GeneLoc Exon Structure
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Expression for SLC25A24 gene
(RNA expression data according to
H-InvDB,
NONCODE,
miRBase, and
RNAdb,
Expression images according to data from
BioGPS,
Illumina Human BodyMap, and
CGAP
SAGE,
Sets of similar genes according to GeneDecks,
in vivo and in vitro expression data from LifeMap Discovery™,
plus additional links to
Genevestigator, and/or
SOURCE, and/or
BioGPS, and/or
UniProtKB,
PCR Arrays from
SABiosciences,
Primers from
OriGene,
SABiosciences, and/or
QIAGEN,
In Situ Hybridization Assays from Advanced Cell Diagnostics)
About This Section
| SLC25A24 expression in normal human tissues (normalized intensities) See probesets specificity/sensitivity at GeneAnnot About this imageBioGPS CGAP TAG: ATCAGCTCTT
About this image See SLC25A24 Protein Expression from SPIRE MOPED and PaxDB Genevestigator expression for SLC25A24
SOURCE GeneReport for Unigene cluster: Hs.656870 UniProtKB/Swiss-Prot: SCMC1_HUMAN, Q6NUK1Tissue specificity: Present in various cell lines (at protein level). Expressed in all tissues tested. Highly expressedin testis, expressed at intermediate level in small intestine and pancreas, and weakly expressed in kidney, spleen,liver, skeletal muscle and heart SABiosciences Expression via Pathway-Focused PCR Array including SLC25A24:
Primer Products: |  | OriGene genome-wide validated SYBR primer pairs in human, mouse, rat for SLC25A24 Browse OriGene validated miRNA SYBR primer pairs
| |  | SABiosciences RT2 qPCR Primer Assay in human, mouse, rat SLC25A24 | |  | QIAGEN QuantiTect SYBR Green Assays in human, mouse, rat SLC25A24 | |  | QIAGEN QuantiFast Probe-based Assays in human, mouse, rat SLC25A24 | In Situ Assay Products: |
| Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for SLC25A24 |
Orthologs for SLC25A24 gene
(Orthologs according to
1,2HomoloGene (2older version, for species not in 1newer version),
3euGenes,
4SGD
,
5MGI Mar 06 2013,
with possible further links to
Flybase
and/or
WormBase,
and/or
6Ensembl pan taxonomic compara ,
Gene Trees according to Ensembl and
TreeFam)
About This Section
|
This gene was present in the common ancestor of eukaryotes.
Orthologs for SLC25A24 gene from 8/29 species (see all 29) About this table
ENSEMBL Gene Tree for SLC25A24 (if available) TreeFam Gene Tree for SLC25A24 (if available)  |
Paralogs for SLC25A24 gene(Paralogs according to
1HomoloGene, 2Ensembl, and 3SIMAP, Pseudogenes according to 4Pseudogene.org Build 68) About This Section
| Paralogs for SLC25A24 gene
- SLC25A232 SLC25A422 SLC25A252 SLC25A162 SLC25A412
15 SIMAP similar genes for SLC25A24 using alignment to 3 protein entries: SCMC1_HUMAN (see all proteins):SLC25A25 SLC25A23 SLC25A41 SLC25A16 CALML5 SLC25A4 CALM1 CALM2 CALM3 CALML3 SLC25A32 SLC25A6 CAPS SLC25A31 SLC25A5
SLC25A24 for paralogs About GeneDecksing
2 Pseudogenes.org Pseudogenes for SLC25A24 PGOHUM00000244135 PGOHUM00000244833
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Genomic Variants for SLC25A24 gene(SNPs/Variants according to the
1NCBI SNP Database,
2Ensembl,
3PupaSUITE,
UniProtKB, and
DNA2.0,
Linkage Disequilibrium by HapMap,
Structural Variations(CNVs/InDels/Inversions) from the Database of Genomic Variants, Mutations from the Human Gene
Mutation Database (HGMD) and the Locus Specific Mutation
Databases (LSDB), Blood group antigen gene mutations by BGMUT,
Resequencing Primers from QIAGEN,
Cancer Mutation PCR Arrays and Assays and Copy Number PCR Arrays from SABiosciences)
About This Section
|
| Genomic Data | Transcription Related Data | Allele Frequencies | | SNP ID | Valid | Clinical significance | Chr 1 pos | Sequence | # | AA Chg | Type | More | # | Allele freq | Pop | Total sample | More |
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HapMap Linkage Disequilibrium report for SLC25A24 (108676658 - 108743471 bp)
Structural Variations (Copy Number Variations, Insertions/Deletions, Inversions) Database of Genomic Variants (DGV): 28 variations for SLC25A24 15/23 CNVs (see all 23): 37397 84443 69528 74621 43731 39004 84447 97466 34673 30395 3305 31644 34672 74623 60867 5 Indels: 74619 84446 74624 84444 74622  | SABiosciences Cancer Mutation PCR Assays |
|  | QIAGEN SeqTarget long-range PCR primers in human, mouse, rat for resequencing SLC25A24 |
|
Disorders
/ Diseases for SLC25A24 gene
(in which this Gene is Involved, According to MalaCards,
OMIM, UniProtKB,
the University of Copenhagen DISEASES
database,
Genatlas, GeneTests,
GAD,
HuGE Navigator,
and/or TGDB.)
About This Section
|
SLC25A24 for disorders About GeneDecksing
OMIM gene information: 608744
OMIM disorders: --
3 diseases for SLC25A24: About MalaCardsnight blindness blindness malaria Human Genome Epidemiology (HuGE) Navigator: SLC25A24 (2 documents) Export disorders for SLC25A24 gene to outside databases
|
Publications for SLC25A24 gene (in
PubMed.
Associations of this gene to articles via
1Entrez Gene,
2UniProtKB/Swiss-Prot,
3HGNC,
4GAD,
5PharmGKB,
6HMDB,
7DrugBank,
8UniProtKB/TrEMBL,
9 Novoseek, and/or
10fRNAdb)
About This Section
|
PubMed articles for SLC25A24 gene, integrated from 9 sources (see all 19): (articles sorted by number of sources associating them with SLC25A24) | |  | Utopia: connect your pdf to the dynamic world of online information |
- Identification of the mitochondrial ATP-Mg/Pi transporter. Bacterial expression, reconstitution, functional characterization, and tissue distribution. (PubMed id 15123600)1, 2, 3 Fiermonte G....Palmieri F. (2004)
- Identification of a novel human subfamily of mitochondrial carriers with calcium-binding domains. (PubMed id 15054102)1, 2 del Arco A. and Satrustegui J. (2004)
- The proteomic analysis of endogenous FAT10 substrates identifies p62/SQSTM1 as a substrate of FAT10ylation. (PubMed id 22797925)1 Aichem A....Groettrup M. (2012)
- A census of human soluble protein complexes. (PubMed id 22939629)1 Havugimana P.C....Emili A. (2012)
- SCaMC-1 promotes cancer cell survival by desensitizing mitochondrial permeability transition via ATP/ADP-mediated matrix Ca(2+) buffer ing. (PubMed id 22015608)1 Traba J....Satrustegui J. (2012)
- Initial characterization of the human central proteome. (PubMed id 21269460)2 Burkard T.R.... Colinge J. (2011)
- A proteome-wide, quantitative survey of in vivo ubiqui tylation sites reveals widespread regulatory roles. (PubMed id 21890473)1 Wagner S.A....Choudhary C. (2011)
- Mass spectrometric analysis of lysine ubiquitylation r eveals promiscuity at site level. (PubMed id 21139048)1 Danielsen J.M....Nielsen M.L. (2011)
- Personalized smoking cessation: interactions between nicotine dose, dependence and quit-success genotype score. (PubMed id 20379614)1 Rose J.E....Uhl G.R. (2010)
- Genetic variants in nuclear-encoded mitochondrial gen es influence AIDS progression. (PubMed id 20877624)1 Hendrickson S.L....O'Brien S.J. (2010)
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External Searches for SLC25A24 gene
(in PubMed,
OMIM, and NCBI Bookshelf) About This Section
|
|
Genome Databases showing SLC25A24 gene
(According to
Entrez Gene,
HGNC,
AceView,
euGenes,
Ensembl,
miRBase,
ECgene,
Kegg,
and/or
H-InvDB)
About This Section
|
|
Other Databases showing SLC25A24 gene
(According to HUGE)
About This Section
| -- |
Specialized Databases showing SLC25A24 gene(According to PharmGKB,
ATLAS, HORDE, IMGT, LEIDEN, UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL, Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot) About This Section
|
| Name | Description |
| PharmGKB entry for SLC25A24 | Pharmacogenomics, SNPs, Pathways |
|
| | |
About This Section
| Patent Information for SLC25A24 gene: Search GeneIP for patents involving SLC25A24
GeneCards and IP: Japan Patent Office Licenses GeneCards European Patent Office Licenses GeneCards Improving the IP Search
|
Products for SLC25A24 gene(Antibodies, recombinant proteins, and assays from EMD Millipore, R&D Systems, OriGene, QIAGEN, GenScript, Cell Signaling Technology, SABiosciences, Novus Biologicals, Sino Biological, Enzo Life Sciences, Abcam, ProSpec, Uscn, Thermo Fisher Scientific, Gene Editing from DNA2.0, Clones from EMD Millipore, OriGene, GenScript, Sino Biological, DNA2.0, SwitchGear Genomics, Vector BioLabs, Cell lines from GenScript and LifeMap BioReagents, PCR Arrays from SABiosciences, Drugs and/or compounds from EMD Millipore, Tocris Bioscience, and/or
Enzo Life Sciences), In Situ Hybridization Assays from Advanced Cell Diagnostics About This Section
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 | |
 | |
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 | | SLC25A24 Proteins, Antibodies, CLIAs, and ELISAs |
| | | | Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for SLC25A24 |
|  |  |  | | | Search ThermoFisher Antibodies for SLC25A24 |
| | Vector BioLabs ready-to-use adenovirus/AAV for human, mouse, rat SLC25A24 |
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