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Aliases for SLC25A20P1 Gene

Aliases for SLC25A20P1 Gene

  • Solute Carrier Family 25 Member 20 Pseudogene 1 2 3 5
  • Solute Carrier Family 25 (Carnitine/Acylcarnitine Translocase), Member 20 Pseudogene 1 2 3
  • Solute Carrier Family 25 (Carnitine/Acylcarnitine Translocase), Member 20 Pseudogene 2
  • SLC25A20P 3
  • CACTP 3

External Ids for SLC25A20P1 Gene

Previous HGNC Symbols for SLC25A20P1 Gene

  • CACTP
  • SLC25A20P

Previous GeneCards Identifiers for SLC25A20P1 Gene

  • GC06P052114
  • GC06P051942

Summaries for SLC25A20P1 Gene

GeneCards Summary for SLC25A20P1 Gene

SLC25A20P1 (Solute Carrier Family 25 Member 20 Pseudogene 1) is a Pseudogene.

Additional gene information for SLC25A20P1 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for SLC25A20P1 Gene

Genomics for SLC25A20P1 Gene

GeneHancer (GH) Regulatory Elements for SLC25A20P1 Gene

Promoters and enhancers for SLC25A20P1 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH06I052244 Promoter 0.5 EPDnew 550.8 -1.9 -1855 0.1 SLC25A20P1 IL17F LOC105375088
GH06I052388 Enhancer 2.1 VISTA FANTOM5 Ensembl ENCODE dbSUPER 10.2 +143.8 143820 3.7 HDGF FOXA2 SMAD1 MLX ARID4B FEZF1 IRF4 YY1 ZNF766 JUNB EFHC1 PAQR8 MCM3 IL17F SLC25A20P1 PIR61259
GH06I052396 Enhancer 1.5 FANTOM5 Ensembl ENCODE dbSUPER 10.3 +152.9 152853 4.8 ELF3 FOXA2 ARID4B BMI1 BATF ZNF2 RAD21 RARA SLC30A9 ARID2 MCM3 EFHC1 PAQR8 IL17F SLC25A20P1 PIR61259
GH06I052154 Enhancer 1.4 FANTOM5 Ensembl ENCODE dbSUPER 10.9 -90.1 -90072 4.1 PKNOX1 BATF IRF4 ETS1 SCRT2 ATF7 ETV6 BCLAF1 IKZF2 RUNX3 GC06P052155 IL17F SLC25A20P1 IL17A PKHD1 MCM3 PAQR8 GC06M052169
GH06I052535 Enhancer 1.4 Ensembl ENCODE dbSUPER 9.6 +296.0 296032 13.3 PKNOX1 FOXA2 SMAD1 MLX ARID4B IRF4 YY1 SLC30A9 SP5 JUNB EFHC1 TRAM2-AS1 TRAM2 MCM3 SLC25A20P1 IL17F PAQR8 LOC730101 GC06P052544 PIR31355
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around SLC25A20P1 on UCSC Golden Path with GeneCards custom track

Genomic Locations for SLC25A20P1 Gene

Genomic Locations for SLC25A20P1 Gene
chr6:52,246,371-52,248,104
(GRCh38/hg38)
Size:
1,734 bases
Orientation:
Plus strand
chr6:52,111,169-52,112,902
(GRCh37/hg19)

Genomic View for SLC25A20P1 Gene

Genes around SLC25A20P1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
SLC25A20P1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for SLC25A20P1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for SLC25A20P1 Gene

Proteins for SLC25A20P1 Gene

Post-translational modifications for SLC25A20P1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for SLC25A20P1 Gene

Domains & Families for SLC25A20P1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for SLC25A20P1 Gene

Function for SLC25A20P1 Gene

Phenotypes From GWAS Catalog for SLC25A20P1 Gene

Phenotypes for SLC25A20P1 Gene

GenomeRNAi human phenotypes for SLC25A20P1:
genes like me logo Genes that share phenotypes with SLC25A20P1: view

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for SLC25A20P1 Gene

Localization for SLC25A20P1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for SLC25A20P1 Gene

Pathways & Interactions for SLC25A20P1 Gene

SuperPathways for SLC25A20P1 Gene

No Data Available

Interacting Proteins for SLC25A20P1 Gene

Gene Ontology (GO) - Biological Process for SLC25A20P1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for SLC25A20P1 Gene

Drugs & Compounds for SLC25A20P1 Gene

No Compound Related Data Available

Transcripts for SLC25A20P1 Gene

mRNA/cDNA for SLC25A20P1 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for SLC25A20P1 Gene

No ASD Table

Relevant External Links for SLC25A20P1 Gene

GeneLoc Exon Structure for
SLC25A20P1
ECgene alternative splicing isoforms for
SLC25A20P1

Expression for SLC25A20P1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for SLC25A20P1 Gene

NURSA nuclear receptor signaling pathways regulating expression of SLC25A20P1 Gene:

SLC25A20P1
genes like me logo Genes that share expression patterns with SLC25A20P1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for SLC25A20P1 Gene

Orthologs for SLC25A20P1 Gene

Evolution for SLC25A20P1 Gene

ENSEMBL:
Gene Tree for SLC25A20P1 (if available)
TreeFam:
Gene Tree for SLC25A20P1 (if available)

No data available for Orthologs for SLC25A20P1 Gene

Paralogs for SLC25A20P1 Gene

No data available for Paralogs for SLC25A20P1 Gene

Variants for SLC25A20P1 Gene

Additional Variant Information for SLC25A20P1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
SLC25A20P1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for SLC25A20P1 Gene

Disorders for SLC25A20P1 Gene

Additional Disease Information for SLC25A20P1

Genetic Association Database
(GAD)

No disorders were found for SLC25A20P1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for SLC25A20P1 Gene

Publications for SLC25A20P1 Gene

  1. Genome-wide association with bone mass and geometry in the Framingham Heart Study. (PMID: 17903296) Kiel DP … Karasik D (BMC medical genetics 2007) 44 58

Products for SLC25A20P1 Gene

Sources for SLC25A20P1 Gene

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