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Aliases for SLC22A8 Gene

Aliases for SLC22A8 Gene

  • Solute Carrier Family 22 Member 8 2 3 5
  • Solute Carrier Family 22 (Organic Anion Transporter), Member 8 2 3
  • Organic Anion Transporter 3 3 4
  • HOAT3 3 4
  • OAT3 3 4

External Ids for SLC22A8 Gene

Previous GeneCards Identifiers for SLC22A8 Gene

  • GC11M065273
  • GC11M064335
  • GC11M062536
  • GC11M062520
  • GC11M062516
  • GC11M062760
  • GC11M059089

Summaries for SLC22A8 Gene

Entrez Gene Summary for SLC22A8 Gene

  • This gene encodes a protein involved in the sodium-independent transport and excretion of organic anions, some of which are potentially toxic. The encoded protein is an integral membrane protein and appears to be localized to the basolateral membrane of the kidney. Multiple alternatively spliced transcript variants that encode different protein isoforms have been described for this gene. [provided by RefSeq, May 2010]

GeneCards Summary for SLC22A8 Gene

SLC22A8 (Solute Carrier Family 22 Member 8) is a Protein Coding gene. Among its related pathways are Transport of glucose and other sugars, bile salts and organic acids, metal ions and amine compounds and Methotrexate Pathway, Pharmacokinetics. GO annotations related to this gene include transmembrane transporter activity and ion transmembrane transporter activity. An important paralog of this gene is SLC22A6.

UniProtKB/Swiss-Prot for SLC22A8 Gene

  • Plays an important role in the excretion/detoxification of endogenous and exogenous organic anions, especially from the brain and kidney. Involved in the transport basolateral of steviol, fexofenadine. Transports benzylpenicillin (PCG), estrone-3-sulfate (E1S), cimetidine (CMD), 2,4-dichloro-phenoxyacetate (2,4-D), p-amino-hippurate (PAH), acyclovir (ACV) and ochratoxin (OTA).

Gene Wiki entry for SLC22A8 Gene

No data available for CIViC summary , Tocris Summary , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for SLC22A8 Gene

Genomics for SLC22A8 Gene

Regulatory Elements for SLC22A8 Gene

Enhancers for SLC22A8 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH11G063245 0.9 dbSUPER 10.6 -231.7 -231695 3.3 TBP FOXA2 ZBTB40 RARA YY1 GATA2 CREM MIXL1 SP5 CEBPA SLC22A8 SLC22A9 SLC22A25 LOC105369334
GH11G062896 0.5 dbSUPER 11 +119.4 119390 0.6 EGR1 CHD1 ZBTB33 ZNF384 NR2F2 SLC22A8 BSCL2 ROM1 GC11P062886 ENSG00000257002
GH11G062895 0.4 dbSUPER 11 +120.3 120305 0.5 GLIS1 SLC22A8 GC11P062886 ENSG00000257002
GH11G063020 0.8 ENCODE 0.7 -5.0 -4989 0.2 HDGF BCOR CTCF KLF1 RB1 ZNF239 SMC3 KLF13 ZBTB20 SMARCA5 SLC22A8 LOC100127954
GH11G063023 1.3 Ensembl ENCODE 0.4 -8.3 -8344 1.1 HDGF PKNOX1 AGO1 ARID4B SIN3A DMAP1 ZNF2 YY1 SLC30A9 ZNF143 COX8A LOC100127954 SLC22A8
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around SLC22A8 on UCSC Golden Path with GeneCards custom track

Genomic Location for SLC22A8 Gene

Chromosome:
11
Start:
62,989,154 bp from pter
End:
63,015,845 bp from pter
Size:
26,692 bases
Orientation:
Minus strand

Genomic View for SLC22A8 Gene

Genes around SLC22A8 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
SLC22A8 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for SLC22A8 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for SLC22A8 Gene

Proteins for SLC22A8 Gene

  • Protein details for SLC22A8 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Q8TCC7-S22A8_HUMAN
    Recommended name:
    Solute carrier family 22 member 8
    Protein Accession:
    Q8TCC7
    Secondary Accessions:
    • B4DPH7
    • F5GWA8
    • F5H5J1
    • O95820
    • Q59EW9
    • Q96TC1

    Protein attributes for SLC22A8 Gene

    Size:
    542 amino acids
    Molecular mass:
    59856 Da
    Quaternary structure:
    No Data Available
    SequenceCaution:
    • Sequence=AAD19357.1; Type=Frameshift; Positions=Several; Evidence={ECO:0000305}; Sequence=BAD92929.1; Type=Erroneous initiation; Evidence={ECO:0000305};

    Alternative splice isoforms for SLC22A8 Gene

    UniProtKB/Swiss-Prot:

neXtProt entry for SLC22A8 Gene

Post-translational modifications for SLC22A8 Gene

  • Glycosylation at Asn86 and isoforms=2, 4102
  • Modification sites at PhosphoSitePlus

No data available for DME Specific Peptides for SLC22A8 Gene

Domains & Families for SLC22A8 Gene

Gene Families for SLC22A8 Gene

Suggested Antigen Peptide Sequences for SLC22A8 Gene

GenScript: Design optimal peptide antigens:

Graphical View of Domain Structure for InterPro Entry

Q8TCC7

UniProtKB/Swiss-Prot:

S22A8_HUMAN :
  • Belongs to the major facilitator (TC 2.A.1) superfamily. Organic cation transporter (TC 2.A.1.19) family.
Family:
  • Belongs to the major facilitator (TC 2.A.1) superfamily. Organic cation transporter (TC 2.A.1.19) family.
genes like me logo Genes that share domains with SLC22A8: view

Function for SLC22A8 Gene

Molecular function for SLC22A8 Gene

GENATLAS Biochemistry:
solute carrier protein family 22,member A8,polyspecific transporter for organic cations,mediating the coupled exchange of alpha-ketoglutarate with multiple organic ions,expressed strongly in kidney,weakly in brain
UniProtKB/Swiss-Prot Function:
Plays an important role in the excretion/detoxification of endogenous and exogenous organic anions, especially from the brain and kidney. Involved in the transport basolateral of steviol, fexofenadine. Transports benzylpenicillin (PCG), estrone-3-sulfate (E1S), cimetidine (CMD), 2,4-dichloro-phenoxyacetate (2,4-D), p-amino-hippurate (PAH), acyclovir (ACV) and ochratoxin (OTA).

Gene Ontology (GO) - Molecular Function for SLC22A8 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005452 inorganic anion exchanger activity IDA 15037815
GO:0015301 anion:anion antiporter activity TAS --
GO:0015347 sodium-independent organic anion transmembrane transporter activity IBA --
GO:0022857 transmembrane transporter activity IEA --
genes like me logo Genes that share ontologies with SLC22A8: view
genes like me logo Genes that share phenotypes with SLC22A8: view

Animal Models for SLC22A8 Gene

MGI Knock Outs for SLC22A8:

Animal Model Products

CRISPR Products

miRNA for SLC22A8 Gene

miRTarBase miRNAs that target SLC22A8

Inhibitory RNA Products

No data available for Enzyme Numbers (IUBMB) , Human Phenotype Ontology , Transcription Factor Targets and HOMER Transcription for SLC22A8 Gene

Localization for SLC22A8 Gene

Subcellular locations from UniProtKB/Swiss-Prot for SLC22A8 Gene

Basolateral cell membrane; Multi-pass membrane protein. Note=Localizes on the brush border membrane of the choroid epithelial cells. Localizes to the basolateral membrane of the proximal tubular cells. Localizes on the abluminal and possibly, luminal membrane of the brain capillary endothelial cells (BCEC) (By similarity). {ECO:0000250}.

Subcellular locations from

COMPARTMENTS
Extracellular space Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi Apparatus Nucleus Mitochondrion 0 1 2 3 4 5 Confidence
COMPARTMENTS Subcellular localization image for SLC22A8 gene
Compartment Confidence
plasma membrane 5
extracellular 5

Gene Ontology (GO) - Cellular Components for SLC22A8 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005886 plasma membrane TAS --
GO:0005887 integral component of plasma membrane IBA --
GO:0016020 membrane IEA --
GO:0016021 integral component of membrane IEA --
GO:0016323 basolateral plasma membrane IDA,IEA 15037815
genes like me logo Genes that share ontologies with SLC22A8: view

Pathways & Interactions for SLC22A8 Gene

genes like me logo Genes that share pathways with SLC22A8: view

Interacting Proteins for SLC22A8 Gene

Gene Ontology (GO) - Biological Process for SLC22A8 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0006810 transport IEA --
GO:0006811 ion transport IEA --
GO:0009636 response to toxic substance IEA --
GO:0015698 inorganic anion transport IEA --
GO:0043252 sodium-independent organic anion transport IBA --
genes like me logo Genes that share ontologies with SLC22A8: view

No data available for SIGNOR curated interactions for SLC22A8 Gene

Drugs & Compounds for SLC22A8 Gene

(86) Drugs for SLC22A8 Gene - From: DrugBank, PharmGKB, DGIdb, FDA Approved Drugs, and Novoseek

Name Status Disease Links Group Role Mechanism of Action Clinical Trials
Probenecid Approved Pharma Inhibition, Inhibitor, blocker, Target, Transporter, inhibitor 29
Cefotaxime Approved Pharma Target, Transporter, inhibitor 36
Dabrafenib Approved Pharma Transporter, inhibitor BRAF kinase inhibitor, Kinase Inhibitors, Mutant BRAF Kinase 84
Cimetidine Approved Pharma Inhibition, Inhibitor, Transporter, substrate, inhibitor H2 receptor antagonist, H2 antagonist, I1 agonist 75
Methotrexate Approved Pharma Transporter, substrate, inhibitor Folate antagonist,inhibits DFHR 1551

(6) Additional Compounds for SLC22A8 Gene - From: Novoseek

Name Synonyms Role CAS Number PubChem IDs PubMed IDs
genes like me logo Genes that share compounds with SLC22A8: view

Transcripts for SLC22A8 Gene

Unigene Clusters for SLC22A8 Gene

Solute carrier family 22 (organic anion transporter), member 8:
Representative Sequences:

CRISPR Products

Inhibitory RNA Products

Alternative Splicing Database (ASD) splice patterns (SP) for SLC22A8 Gene

ExUns: 1a · 1b ^ 2a · 2b · 2c ^ 3 ^ 4a · 4b ^ 5a · 5b ^ 6a · 6b · 6c · 6d ^ 7a · 7b · 7c ^ 8 ^ 9a · 9b ^ 10 ^ 11 ^ 12a · 12b · 12c
SP1: - - - -
SP2: - - - -
SP3: - -
SP4: - - - - -
SP5: -
SP6: - - -
SP7: - - - - - -
SP8:
SP9:

Relevant External Links for SLC22A8 Gene

GeneLoc Exon Structure for
SLC22A8
ECgene alternative splicing isoforms for
SLC22A8

Expression for SLC22A8 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for SLC22A8 Gene

mRNA expression in embryonic tissues and stem cells from LifeMap Discovery

mRNA differential expression in normal tissues according to GTEx for SLC22A8 Gene

This gene is overexpressed in Kidney - Cortex (x51.3).

Protein differential expression in normal tissues from HIPED for SLC22A8 Gene

This gene is overexpressed in Kidney (42.5), Urine (13.2), and Heart (9.3).

Integrated Proteomics: protein expression in normal tissues and cell lines from ProteomicsDB, PaxDb, and MOPED for SLC22A8 Gene



Protein tissue co-expression partners for SLC22A8 Gene

NURSA nuclear receptor signaling pathways regulating expression of SLC22A8 Gene:

SLC22A8

SOURCE GeneReport for Unigene cluster for SLC22A8 Gene:

Hs.266223

mRNA Expression by UniProt/SwissProt for SLC22A8 Gene:

Q8TCC7-S22A8_HUMAN
Tissue specificity: Expressed in kidney.

Evidence on tissue expression from TISSUES for SLC22A8 Gene

  • Kidney(4.9)
  • Nervous system(4.4)
  • Blood(2.2)
  • Urine(2.1)
genes like me logo Genes that share expression patterns with SLC22A8: view

Primer Products

No data available for Phenotype-based relationships between genes and organs from Gene ORGANizer for SLC22A8 Gene

Orthologs for SLC22A8 Gene

This gene was present in the common ancestor of animals and fungi.

Orthologs for SLC22A8 Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia SLC22A8 34 35
  • 95.28 (n)
cow
(Bos Taurus)
Mammalia SLC22A8 34
  • 85.24 (n)
OAT3 35
  • 82 (a)
OneToOne
dog
(Canis familiaris)
Mammalia SLC22A8 34 35
  • 85.01 (n)
rat
(Rattus norvegicus)
Mammalia Slc22a8 34
  • 83.02 (n)
mouse
(Mus musculus)
Mammalia Slc22a8 34 16 35
  • 82.18 (n)
platypus
(Ornithorhynchus anatinus)
Mammalia SLC22A8 35
  • 62 (a)
OneToOne
oppossum
(Monodelphis domestica)
Mammalia -- 35
  • 39 (a)
ManyToMany
lizard
(Anolis carolinensis)
Reptilia -- 35
  • 50 (a)
ManyToMany
-- 35
  • 50 (a)
ManyToMany
-- 35
  • 49 (a)
ManyToMany
-- 35
  • 46 (a)
ManyToMany
zebrafish
(Danio rerio)
Actinopterygii slc22a6l 35
  • 47 (a)
OneToMany
baker's yeast
(Saccharomyces cerevisiae)
Saccharomycetes MPH3 37
Species where no ortholog for SLC22A8 was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rainbow trout (Oncorhynchus mykiss)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)

Evolution for SLC22A8 Gene

ENSEMBL:
Gene Tree for SLC22A8 (if available)
TreeFam:
Gene Tree for SLC22A8 (if available)

Paralogs for SLC22A8 Gene

Variants for SLC22A8 Gene

Sequence variations from dbSNP and Humsavar for SLC22A8 Gene

SNP ID Clin Chr 11 pos Sequence Context AA Info Type
rs1000192624 -- 63,005,576(+) TATAA(C/T)ATGAG intron-variant
rs1000234719 -- 63,017,156(+) ATCAC(C/T)GGAAC upstream-variant-2KB
rs1000242749 -- 63,010,530(+) TGAAC(A/C)ACAAA intron-variant
rs1000358390 -- 63,010,288(+) ACGAT(C/T)CCACA intron-variant
rs1000396503 -- 63,010,800(+) ACTGG(C/T)TCAAG intron-variant

Structural Variations from Database of Genomic Variants (DGV) for SLC22A8 Gene

Variant ID Type Subtype PubMed ID
dgv204e214 CNV gain 21293372
esv34011 CNV loss 18971310

Variation tolerance for SLC22A8 Gene

Residual Variation Intolerance Score: 49.6% of all genes are more intolerant (likely to be disease-causing)
Gene Damage Index Score: 3.60; 56.35% of all genes are more intolerant (likely to be disease-causing)

Relevant External Links for SLC22A8 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
SLC22A8

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for SLC22A8 Gene

Disorders for SLC22A8 Gene

Relevant External Links for SLC22A8

Genetic Association Database (GAD)
SLC22A8
Human Genome Epidemiology (HuGE) Navigator
SLC22A8
Atlas of Genetics and Cytogenetics in Oncology and Haematology:
SLC22A8

No disorders were found for SLC22A8 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for SLC22A8 Gene

Publications for SLC22A8 Gene

  1. The human organic anion transporter 3 (OAT3; SLC22A8): genetic variation and functional genomics. (PMID: 16291576) Erdman A.R. … Giacomini K.M. (Am. J. Physiol. 2006) 3 4 22 46 64
  2. Polymorphisms of OATP-C (SLC21A6) and OAT3 (SLC22A8) genes: consequences for pravastatin pharmacokinetics. (PMID: 12811365) Nishizato Y. … Sugiyama Y. (Clin. Pharmacol. Ther. 2003) 3 4 22 46 64
  3. Inhibition of oat3-mediated renal uptake as a mechanism for drug-drug interaction between fexofenadine and probenecid. (PMID: 16455804) Tahara H. … Sugiyama Y. (Drug Metab. Dispos. 2006) 3 4 22 64
  4. Molecular cloning and functional analyses of OAT1 and OAT3 from cynomolgus monkey kidney. (PMID: 15846473) Tahara H. … Sugiyama Y. (Pharm. Res. 2005) 3 4 22 64
  5. Human organic anion transporter 3 (hOAT3) can operate as an exchanger and mediate secretory urate flux. (PMID: 14586168) Bakhiya A. … Wolff N. (Cell. Physiol. Biochem. 2003) 3 4 22 64

Products for SLC22A8 Gene

Sources for SLC22A8 Gene

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