SLC16A8 Gene
protein-coding GIFtS: 55
GCID: GC22M038474
|
|
solute carrier family 16, member 8 (monocarboxylic acid...(Previous names: solute carrier 16 (monocarboxylic acid transporters), member...)
| |
Aliases
for SLC16A8 gene
(According to
1HGNC,
2Entrez Gene,
3UniProtKB/Swiss-Prot,
4UniProtKB/TrEMBL, 5OMIM, 6GeneLoc,
7Ensembl,
8DME,
9miRBase,
and/or 10fRNAdb)
About This Section
|
| Aliases |
|---|
| Solute Carrier Family 16, Member 8 (Monocarboxylic Acid Transporter 3)1 2 | | Solute Carrier Family 16 Member 82 3 | | MCT31 2 3 | | MCT 32 3 | | REMP1 2 | | Monocarboxylate Transporter 32 | | Solute Carrier 16 (Monocarboxylic Acid Transporters), Member 81 2 | | |
Export aliases for SLC16A8 gene to outside databasesPrevious GC identifers: GC22M035088 GC22M036717 GC22M036798 GC22M021438 |
Summaries
for SLC16A8 gene(According to Entrez Gene,
Tocris Bioscience,
Wikipedia's
Gene Wiki,
PharmGKB,
UniProtKB/Swiss-Prot,
and/or
UniProtKB/TrEMBL)
About This Section
|
Entrez Gene summary for SLC16A8:
SLC16A8 is a member of a family of proton-coupled monocarboxylate transporters that mediate lactate transport acrosscell membranes (Yoon et al., 1999 (PubMed 10493836)).(supplied by OMIM, Apr 2010)
UniProtKB/Swiss-Prot: MOT3_HUMAN, O95907Function: Proton-linked monocarboxylate transporter. Catalyzes the rapid transport across the plasma membrane of manymonocarboxylates such as lactate, pyruvate, branched-chain oxo acids derived from leucine, valine and isoleucine, andthe ketone bodies acetoacetate, beta-hydroxybutyrate and acetate (By similarity)
|
Genomic Views
for SLC16A8 gene
(According to
GeneLoc and/or
HGNC, and/or
Entrez Gene (NCBI build 37),
and/or miRBase,
Genomic Views according to
UCSC (hg19) and
Ensembl (release 69),
Regulatory elements and Epigenetics data according to
QIAGEN,
SABiosciences, and/or
SwitchGear Genomics)
About This Section
| RefSeq DNA sequence:- NC_000022.10 NC_018933.1 NT_011520.12
Regulatory elements:
 SABiosciences Regulatory transcription factor binding sites in the SLC16A8 gene promoter:
AhR NF-1/L NF-1 Sp1 FOXL1 Arnt c-Ets-1 CREB Zic3 ATF6
Other transcription factors
Search SABiosciences Chromatin IP Primers for SLC16A8
Epigenetics:
| | QIAGEN PyroMark CpG Assay predesigned Pyrosequencing DNA Methylation assays in human, mouse, rat SLC16A8 |
Genomic Location:
Genomic View: UCSC Golden Path with GeneCards custom track
Entrez Gene cytogenetic band: 22q12.3-q13.2 Ensembl cytogenetic band: 22q13.1 HGNC cytogenetic band: 22q12.3-q13.2SLC16A8 Gene in genomic location: bands according to Ensembl, locations according to
 (and/or Entrez Gene and/or Ensembl if different)
GeneLoc information about chromosome 22 GeneLoc Exon Structure GeneLoc location for GC22M038474: view genomic region
(about GC identifiers)
Start:
|
38,474,141 bp from pter |
End:
|
38,480,100 bp from pter |
Size:
|
5,960 bases |
Orientation:
|
minus strand |
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Proteins
for SLC16A8 gene
(According to
1UniProtKB,
HORDE,
neXtProt,
Ensembl,
and/or Reactome,
Modification sites according to 2PhosphoSitePlus,
Specific Peptides from DME,
Protein expression images according to data from SPIRE MOPED and PaxDb,
RefSeq according to NCBI,
PDB rendering according to OCA and/or Proteopedia,
Recombinant Proteins
from
EMD Millipore,
R&D Systems,
GenScript,
Enzo Life Sciences,
OriGene,
Novus Biologicals,
Sino Biological,
ProSpec, and/or
Uscn,
Biochemical Assays by
EMD Millipore,
R&D Systems,
OriGene,
GenScript,
Cell Signaling Technology,
Enzo Life Sciences, and/or
Uscn,
Ontologies according to Gene
Ontology Consortium 01 Mar 2013 and
Entrez Gene,
Antibodies by
EMD Millipore,
R&D Systems,
GenScript,
Cell Signaling Technology,
OriGene,
Novus Biologicals,
Thermo Fisher Scientific,
Abcam, and/or
Uscn)
About This Section
|
UniProtKB/Swiss-Prot: MOT3_HUMAN, O95907 (See
protein sequence)Recommended Name: Monocarboxylate transporter 3 Size: 504 amino acids; 52319 Da
Subcellular location: Cell membrane; Multi-pass membrane protein
Secondary accessions: Q9UBE2Explore the universe of human proteins at neXtProt for SLC16A8: NX_O95907
Post-translational modifications:
View modification sites using PhosphoSitePlus2View neXtProt modification sites for NX_O95907
SLC16A8 Protein expression data from MOPED and PaxDb: About this image 
REFSEQ proteins: NP_037488.2
ENSEMBL proteins: ENSP00000321735 ENSP00000409547 Reactome Protein details: O95907
Human Recombinant Protein Products:
Gene Ontology (GO): 5 cellular component terms (GO ID links to tree view): About this table
SLC16A8 for ontologies About GeneDecksing
SLC16A8 Antibody Products:
Assay Products for SLC16A8: |
Protein
Domains /
Families
for SLC16A8 gene(According to InterPro, ProtoNet,
UniProtKB, and/or BLOCKS,
Sets of similar genes according to GeneDecks)
About This Section
|
SLC16A8 for domains About GeneDecksing
4 InterPro domains/families:Graphical View of Domain Structure for InterPro Entry O95907ProtoNet protein and cluster: O95907 UniProtKB/Swiss-Prot: MOT3_HUMAN, O95907Similarity: Belongs to the major facilitator superfamily. Monocarboxylate porter (TC 2.A.1.13) family |
Function
for SLC16A8 gene
(According to 1UniProtKB,
Genatlas,
LifeMap Discovery™,
IUBMB, and/or
2DME,
Human phenotypes from GenomeRNAi,
Animal models from MGI Mar 06 2013,
bound targets from SABiosciences,
miRNA Gene Targets from miRTarBase
shRNA from
OriGene,
RNAi from
EMD Millipore,
siRNAs from
OriGene,
QIAGEN,
microRNA from QIAGEN,
Gene Editing from DNA2.0,
Clones from EMD Millipore,
OriGene,
SwitchGear Genomics,
GenScript,
Sino Biological,
DNA2.0,
and Vector BioLabs,
Cell Lines from GenScript,
LifeMap BioReagents,
In Situ Hybridization Assays from Advanced Cell Diagnostics,
Ontologies according to Gene Ontology Consortium 01 Mar 2013 via
Entrez Gene.)
About This Section
|
Function Summary:
UniProtKB/Swiss-Prot: MOT3_HUMAN, O95907Function: Proton-linked monocarboxylate transporter. Catalyzes the rapid transport across the plasma membrane of manymonocarboxylates such as lactate, pyruvate, branched-chain oxo acids derived from leucine, valine and isoleucine, andthe ketone bodies acetoacetate, beta-hydroxybutyrate and acetate (By similarity)
Clone
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OriGene untagged cDNA clones in CMV expression vector in human, mouse, rat for SLC16A8
OriGene custom cloning services – gene synthesis, subcloning, mutagenesis,
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In Situ Assay
Products: |
 | Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for SLC16A8 |
Gene Ontology (GO): 3 molecular function terms (GO ID links to tree view): About this table | GO ID | Qualified GO term | Evidence | PubMed IDs |
|---|
| GO:0015129 | lactate transmembrane transporter activity |
TAS | 10493836 | | GO:0015293 | symporter activity |
IEA | -- | | GO:0015355 | secondary active monocarboxylate transmembrane transporter activity |
IEA | -- |
SLC16A8 for ontologies About GeneDecksing
2 GenomeRNAi human phenotypes for SLC16A8:
Animal Models:
Mouse knock-out Slc16a8tm1Njp for SLC16A8
1 MGI mutant phenotype (inferred from 1 allele ) (MGI details for Slc16a8):
SLC16A8 for phenotypes About GeneDecksing
|
Pathways & Interactions
for SLC16A8 gene
(Pathways according to
EMD Millipore,
R&D Systems,
Cell Signaling Technology,
KEGG,
PharmGKB,
BioSystems,
Reactome,
Tocris Bioscience,
GeneGo (Thomson Reuters),
QIAGEN,
and/or UniProtKB,
Sets of similar genes according to GeneDecks,
Interaction Networks according to
SABiosciences,
and/or STRING,
Interactions according to 1UniProtKB,
2MINT,
3I2D, and/or
4STRING,
with links to IntAct and
Ensembl,
Ontologies according to Gene Ontology Consortium 01 Mar 2013 via
Entrez Gene).
About This Section
|
Unified GeneCards pathways - 5/9 super-pathways (see all 9) About this table
See pathways by source
| Super-pathway | contained gene-specific pathways |
|---|
| 1 | SLC-mediated transmembrane transport | | | 2 | Bile salt and organic anion SLC transporters | | | 3 | Pyruvate metabolism | | | 4 | Basigin interactions | | | 5 | Cell surface interactions at the vascular wall | |
Pathway sources
See GeneCards unified pathways
Show all pathways
5/12 
Reactome Pathways for SLC16A8 (see all 12)
SLC16A8 for pathways About GeneDecksing
Interactions:
Search SABiosciences Gene Network CentralTM Interacting Genes and Proteins Networks for SLC16A8
STRING Interaction
Network Preview (showing 4 interactants - click image to see more details)
5 Interacting proteins for SLC16A8 (O959072, 3 ENSP000003217354) via UniProtKB, MINT, STRING, and/or I2DAbout this table
Gene Ontology (GO): 5/7 biological process terms (GO ID links to tree view) (see all 7): About this table
SLC16A8 for ontologies About GeneDecksing
|
Drugs & Compounds
for SLC16A8 gene(Chemical Compounds according to UniProtKB, Enzo Life Sciences,
EMD Millipore, Tocris Bioscience
HMDB,
BitterDB, and/or
Novoseek, and Drugs according to
DrugBank,
Enzo Life Sciences, and/or
PharmGKB, with drugs/clinical trials/news
search links to CenterWatch)
About This Section
|
 Browse Tocris compounds for SLC16A8
1 HMDB Compound for SLC16A8 About this table
1 DrugBank Compound for SLC16A8 About this table
Search CenterWatch for drugs/clinical trials and news about SLC16A8 / MOT3
|
Transcripts
for SLC16A8 gene(Secondary structures according to
fRNAdb,
GenBank/EMBL/DDBJ Accessions according to
Unigene
(Build 235 Homo sapiens; Mar 10 2013) or GenBank,
RefSeq according to Entrez Gene,
DOTS (version 10), and/or
AceView,
transcript ids from Ensembl
with links to UCSC,
exon structure from GeneLoc,
alternative splicing isoforms according to ASD and/or
ECgene,
RNAi Products from
EMD Millipore,
siRNAs from
OriGene,
QIAGEN,
shRNA from
OriGene,
microRNA from QIAGEN,
Tagged/untagged cDNA clones from
OriGene,
SwitchGear Genomics,
GenScript,
DNA2.0,
Vector BioLabs,
Primers from
OriGene,
SABiosciences, and/or
QIAGEN
)
About This Section
|
REFSEQ mRNAs for SLC16A8 gene: NM_013356.2 Unigene Cluster for SLC16A8: Solute carrier family 16, member 8 (monocarboxylic acid transporter 3) Hs.270285 [show with all ESTs]Unigene Representative Sequence: NM_0133563 Ensembl transcripts including schematic representations, and UCSC links where relevant: ENST00000320521(uc003auu.3) ENST00000469516 ENST00000427592
Clone
Products: | | OriGene Myc/DDK tagged cDNA clones in CMV expression vector in human, mouse, rat for SLC16A8 (see all 3)
OriGene untagged cDNA clones in CMV expression vector in human, mouse, rat for SLC16A8
OriGene custom cloning services – gene synthesis, subcloning, mutagenesis,
variant library, vector shuttling
| | | GenScript: all cDNA clones in your preferred vector: SLC16A8 (NM_013356) | | | DNA2.0 Custom Codon Optimized Gene
Synthesis Service for SLC16A8 | | | Vector BioLabs ready-to-use adenovirus/AAV for human, mouse, rat SLC16A8 |
Additional cDNA sequence: AF132610.1 2 DOTS entries: DT.40281026 DT.100735613 14 AceView cDNA sequences: BM714896 BM716167 NM_013356 BM709138 BM716163 BM714916 H55065 AF132610 BF476254 BF508676 AI005004 BM705316 AI476420 AW166384
GeneLoc Exon Structure
|
Expression
for SLC16A8 gene
(RNA expression data according to
H-InvDB,
NONCODE,
miRBase, and
RNAdb,
Expression images according to data from
BioGPS,
Illumina Human BodyMap, and
CGAP
SAGE,
Sets of similar genes according to GeneDecks,
in vivo and in vitro expression data from LifeMap Discovery™,
plus additional links to
Genevestigator, and/or
SOURCE, and/or
BioGPS, and/or
UniProtKB,
PCR Arrays from
SABiosciences,
Primers from
OriGene,
SABiosciences, and/or
QIAGEN,
In Situ Hybridization Assays from Advanced Cell Diagnostics)
About This Section
| SLC16A8 expression in normal human tissues (normalized intensities)
See probesets specificity/sensitivity at GeneAnnot
About this imageBioGPS
CGAP TAG: GCTGTCGCCA
About this image
See SLC16A8 Protein Expression from SPIRE MOPED and PaxDB
Genevestigator expression for SLC16A8
SOURCE GeneReport for Unigene cluster: Hs.270285
UniProtKB/Swiss-Prot: MOT3_HUMAN, O95907Tissue specificity: Retinal pigment epithelium
SABiosciences Custom PCR Arrays for SLC16A8
Primer
Products: | | OriGene genome-wide validated SYBR primer pairs in human, mouse, rat for SLC16A8
Browse OriGene validated miRNA SYBR primer pairs
| | | SABiosciences RT2 qPCR Primer Assay in human, mouse, rat SLC16A8 | | | QIAGEN QuantiTect SYBR Green Assays in human, mouse, rat SLC16A8 | | | QIAGEN QuantiFast Probe-based Assays in human, mouse, rat SLC16A8 | In Situ
Assay Products: |
| Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for SLC16A8 |
Orthologs
for SLC16A8 gene
(Orthologs according to
1,2HomoloGene (2older version, for species not in 1newer version),
3euGenes,
4SGD
,
5MGI Mar 06 2013,
with possible further links to
Flybase
and/or
WormBase,
and/or
6Ensembl pan taxonomic compara ,
Gene Trees according to Ensembl and
TreeFam)
About This Section
|
This gene was present in the common ancestor of animals and fungi.
Orthologs for SLC16A8 gene from 5/16 species (see all 16) About this table
| Organism |
Taxonomic
classification |
Gene |
Description |
Human
Similarity |
Orthology
Type |
Details |
chicken
(Gallus gallus) |
Aves |
SLC16A81 |
solute carrier family 16, member 8 (monocarboxylic more |
67.11(n)
67.79(a) |
|
396041 NM_205140.1 NP_990471.1 |
lizard
(Anolis carolinensis) |
Reptilia |
SLC16A86 |
-- |
54(a) |
1 ↔ 1 |
GL343460.1(272057-279447) |
zebrafish
(Danio rerio) |
Actinopterygii |
LOC5578841 |
monocarboxylate transporter 3-like |
59.72(n)
64.12(a) |
|
557884 XM_681038.1 XP_686130.1 |
fruit fly
(Drosophila melanogaster) |
Insecta |
CG82713 |
monocarboxylate porter |
38(a)
(best of 2) |
|
48C5 -- |
K. lactis yeast
(Kluyveromyces lactis) |
Saccharomycetes |
KLLA0F11077g1 |
hypothetical protein |
36.7(n)
29.67(a) |
|
2895123 XM_455584.1 XP_455584.1 |
ENSEMBL Gene Tree for SLC16A8 (if available)
TreeFam Gene Tree for SLC16A8 (if available) |
Paralogs
for SLC16A8 gene(Paralogs according to
1HomoloGene,
2Ensembl, and 3SIMAP, Pseudogenes according to 4Pseudogene.org Build 68)
About This Section
| Paralogs for SLC16A8 gene
- SLC16A42 SLC16A32 SLC16A52 SLC16A102 SLC16A112 SLC16A22 SLC16A62 SLC16A142
- SLC16A72 SLC16A12 SLC16A122 SLC16A132 SLC16A92
12 SIMAP similar genes for SLC16A8 using alignment to 2 protein entries: MOT3_HUMAN (see all proteins):SLC16A3 SLC16A7 SLC16A1 SLC16A5 SLC16A11 SLC16A4
SLC16A9 SLC16A12 SLC16A10 SLC16A14 SLC16A6 SLC16A13
SLC16A8 for paralogs About GeneDecksing
|
Genomic Variants
for SLC16A8 gene(SNPs/Variants according to the
1NCBI SNP Database,
2Ensembl,
3PupaSUITE,
UniProtKB, and
DNA2.0,
Linkage Disequilibrium by HapMap,
Structural Variations(CNVs/InDels/Inversions) from the Database of Genomic Variants, Mutations from the Human Gene
Mutation Database (HGMD) and the Locus Specific Mutation
Databases (LSDB), Blood group antigen gene mutations by BGMUT,
Resequencing Primers from QIAGEN,
Cancer Mutation PCR Arrays and Assays and Copy Number PCR Arrays from SABiosciences)
About This Section
|
| Genomic Data | Transcription Related Data | Allele Frequencies | | SNP ID | Valid | Clinical
significance | Chr 22 pos | Sequence | # | AA
Chg | Type | More | # | Allele
freq | Pop | Total
sample | More |
|---|
HapMap Linkage Disequilibrium report for SLC16A8 (38474141 - 38480100 bp)
Structural Variations (Copy Number Variations, Insertions/Deletions, Inversions)
Database of Genomic Variants (DGV): 2 variations for SLC16A8
2 CNVs: 5185 5186 | SABiosciences Cancer Mutation PCR Assays |
| | QIAGEN SeqTarget long-range PCR primers in human, mouse, rat for resequencing SLC16A8 |
|
Disorders
/ Diseases
for SLC16A8 gene
(in which this Gene is Involved, According to MalaCards,
OMIM, UniProtKB,
the University of Copenhagen DISEASES
database,
Genatlas, GeneTests,
GAD,
HuGE Navigator,
and/or TGDB.)
About This Section
|
SLC16A8 for disorders About GeneDecksing
OMIM gene information: 610409
OMIM disorders: --
1  disease for SLC16A8: About MalaCardsretinitis
Human Genome Epidemiology (HuGE) Navigator: SLC16A8 (1 document)
Export disorders for SLC16A8 gene to outside databases
|
Publications
for SLC16A8 gene (in
PubMed.
Associations of this gene to articles via
1Entrez Gene,
2UniProtKB/Swiss-Prot,
3HGNC,
4GAD,
5PharmGKB,
6HMDB,
7DrugBank,
8UniProtKB/TrEMBL,
9 Novoseek, and/or
10fRNAdb)
About This Section
|
PubMed articles for SLC16A8 gene, integrated from 9 sources (see all 11):
(articles sorted by number of sources associating them with SLC16A8) | |  | Utopia: connect your pdf to the dynamic
world of online information |
- Cloning of the human monocarboxylate transporter MCT3 gene: localization to chromosome 22q12.3-q13.2. (PubMed id 10493836)1, 2, 3, 9 Yoon H.... Philp N.J. (1999)
- The DNA sequence of human chromosome 22. (PubMed id 10591208)1, 2 Dunham I....O'Brien K.P. (1999)
- L-type voltage-dependent calcium channel alpha subuni t 1C is a novel candidate gene associated with secondary hyperparathyroidism: a n application of haplotype-based analysis for multiple linked single nucleotide polymorphisms. (PubMed id 20424473)1 Yokoyama K....Hosoya T. (2010)
- Glucose affects monocarboxylate cotransporter (MCT) 1 expression during mouse preimplantation development. (PubMed id 16514190)7 Jansen S....Kaye P.L. (2006)
- A human protein-protein interaction network: a resource for annotating the proteome. (PubMed id 16169070)1 Stelzl U.... Wanker E.E. (2005)
- Basigin (CD147) is the target for organomercurial inhibition of monocarboxylate transporter isoforms 1 and 4: the ancillary protein for the insensitive MCT2 is EMBIGIN (gp70). (PubMed id 15917240)1 Wilson M.C....Halestrap A.P. (2005)
- The SLC16 gene family-from monocarboxylate transporters (MCTs) to aromatic amino acid transporters and beyond. (PubMed id 12739169)1 Halestrap A.P. and Meredith D. (2004)
- Polarized expression of monocarboxylate transporters in human retinal pigment epithelium and ARPE-19 cells. (PubMed id 12657613)1 Philp N.J....Hjelmeland L.M. (2003)
- Normalization and subtraction: two approaches to facilitate gene discovery. (PubMed id 8889548)1 Bonaldo M.F.... Soares M.B. (1996)
- The glucose-lactic acid cycle and gluconeogenesis. (PubMed id 7273846)1 Cori C.F. (1981)
|
External Searches for SLC16A8 gene
(in PubMed,
OMIM, and NCBI Bookshelf)
About This Section
|
|
Genome Databases showing SLC16A8 gene
(According to
Entrez Gene,
HGNC,
AceView,
euGenes,
Ensembl,
miRBase,
ECgene,
Kegg,
and/or
H-InvDB)
About This Section
|
|
Other Databases showing SLC16A8 gene
(According to HUGE)
About This Section
| -- |
Specialized Databases showing SLC16A8 gene(According to PharmGKB,
ATLAS, HORDE, IMGT, LEIDEN, UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL,
Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot)
About This Section
|
| Name | Description |
| PharmGKB entry for SLC16A8 | Pharmacogenomics, SNPs, Pathways |
|
| | |
About This Section
| Patent Information for SLC16A8 gene:
Search GeneIP for patents involving SLC16A8
GeneCards and IP:
Japan Patent Office Licenses GeneCards European Patent Office Licenses GeneCards Improving the IP Search
|
Products
for SLC16A8 gene(Antibodies, recombinant proteins, and assays from EMD Millipore, R&D Systems, OriGene, QIAGEN, GenScript, Cell Signaling Technology, SABiosciences, Novus Biologicals, Sino Biological, Enzo Life Sciences, Abcam, ProSpec, Uscn, Thermo Fisher Scientific, Gene Editing from DNA2.0, Clones from EMD Millipore, OriGene, GenScript, Sino Biological, DNA2.0, SwitchGear Genomics, Vector BioLabs, Cell lines from GenScript and LifeMap BioReagents, PCR Arrays from SABiosciences, Drugs and/or compounds from EMD Millipore, Tocris Bioscience, and/or
Enzo Life Sciences),
In Situ Hybridization Assays from
Advanced Cell Diagnostics
About This Section
|
 | |
 | |
 |
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| | | | | Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for SLC16A8 |
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