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Category   Symbol Source: HGNC EntrezGene Ensembl GeneCards RNA genes CroW21
GIFtS

SLC16A11 Gene

protein-coding   GIFtS: 44
GCID: GC17M006944

Solute Carrier Family 16, Member 11

(Previous names: solute carrier family 16 (monocarboxylic acid transporters),...)
  Search for SLC16A11
at  

(According to 1HGNC, 2Entrez Gene,
3UniProtKB/Swiss-Prot, 4UniProtKB/TrEMBL, 5OMIM, 6GeneLoc, 7Ensembl, 8DME, 9miRBase, 10fRNAdb, 12H-InvDB, 13NCBI, 14NONCODE, and/or 15RNAdb)
About This Section

Aliases
Solute Carrier Family 16, Member 111 2     MCT 112 3
Solute Carrier Family 16 (Monocarboxylic Acid Transporters), Member 111 2     Monocarboxylate Transporter 112
Monocarboxylic Acid Transporter 111 2     Solute Carrier Family 16 Member 113
MCT112 3     

External Ids:    HGNC: 230931   Entrez Gene: 1625152   Ensembl: ENSG000001743267   UniProtKB: Q8NCK73   

Export aliases for SLC16A11 gene to outside databases

Previous GC identifers: GC17M006889 GC17M007145 GC17M006885 GC17M006838


(According to Entrez Gene, Tocris Bioscience, Wikipedia's Gene Wiki, PharmGKB,
UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL)
About This Section

GeneCards Summary for SLC16A11 Gene: 
SLC16A11 (solute carrier family 16, member 11) is a protein-coding gene. GO annotations related to this gene include symporter activity. An important paralog of this gene is SLC16A4.

UniProtKB/Swiss-Prot: MOT11_HUMAN, Q8NCK7
Function: Proton-linked monocarboxylate transporter. Catalyzes the rapid transport across the plasma membrane of
many monocarboxylates (By similarity)




(According to GeneLoc and/or HGNC, and/or
Entrez Gene (NCBI build 37),
and/or miRBase,
Genomic Views according to UCSC (hg19) and Ensembl (release 73), Regulatory elements and Epigenetics data according to QIAGEN, SABiosciences, and/or SwitchGear Genomics)
About This Section
RefSeq DNA sequence:
NC_000017.10  NT_010718.16  NC_018928.2  
Regulatory elements:
   SABiosciences Regulatory transcription factor binding sites in the SLC16A11 gene promoter:
         SRF   USF1   Elk-1   Sp1   SRF (504 AA)   Bach2   USF2   USF-1:USF-2   SREBP-1a   USF-1   
         Other transcription factors

SwitchGear Promoter luciferase reporter plasmidSLC16A11 promoter sequence
   Search SABiosciences Chromatin IP Primers for SLC16A11

Epigenetics:
QIAGEN PyroMark CpG Assay predesigned Pyrosequencing DNA Methylation assays in human, mouse, rat SLC16A11


Genomic Location:
Genomic View: UCSC Golden Path with GeneCards custom track

Entrez Gene cytogenetic band: 17p13.1   Ensembl cytogenetic band:  17p13.1   HGNC cytogenetic band: 17p13.2

SLC16A11 Gene in genomic location: bands according to Ensembl, locations according to (and/or Entrez Gene and/or Ensembl if different)
SLC16A11 gene location

GeneLoc information about chromosome 17         GeneLoc Exon Structure

GeneLoc location for GC17M006944:  view genomic region     (about GC identifiers)

Start:
6,944,949 bp from pter      End:
6,947,242 bp from pter
Size:
2,294 bases      Orientation:
minus strand

(According to UniProtKB, HORDE, neXtProt, Ensembl, and/or Reactome, Modification sites according to PhosphoSitePlus, Specific Peptides from DME, Protein expression images according to data from SPIRE 1MOPED, 2PaxDb, and 3MAXQB RefSeq according to NCBI, PDB rendering according to OCA and/or Proteopedia, Recombinant Proteins from EMD Millipore, R&D Systems, GenScript, Enzo Life Sciences, OriGene, Novus Biologicals, Sino Biological, ProSpec, and/or Cloud-Clone Corp.,
Biochemical Assays by EMD Millipore, R&D Systems, OriGene, GenScript, Cell Signaling Technology, Enzo Life Sciences, and/or Cloud-Clone Corp., Ontologies according to Gene Ontology Consortium 01 Oct 2013 and Entrez Gene, Antibodies by EMD Millipore, R&D Systems, GenScript, Cell Signaling Technology, OriGene, Novus Biologicals, Thermo Fisher Scientific, LSBio, Abcam, and/or Cloud-Clone Corp.)
About This Section

UniProtKB/Swiss-Prot: MOT11_HUMAN, Q8NCK7 (See protein sequence)
Recommended Name: Monocarboxylate transporter 11  
Size: 471 amino acids; 47791 Da
Subcellular location: Cell membrane; Multi-pass membrane protein (Potential)
Caution: It is uncertain whether Met-1 or Met-25 is the initiator

Explore the universe of human proteins at neXtProt for SLC16A11: NX_Q8NCK7

Explore proteomics data for SLC16A11 at MOPED 

Post-translational modifications:

  • View modification sites using PhosphoSitePlus
  • View neXtProt modification sites for NX_Q8NCK7

  • SLC16A11 Protein expression data from MOPED1, PaxDb2 and MAXQB3 :    About this image 

    SLC16A11 Protein Expression
    REFSEQ proteins: NP_699188.1  
    ENSEMBL proteins: 
     ENSP00000310490   ENSP00000460927   ENSP00000394449  

    Human Recombinant Protein Products for SLC16A11: 
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    Browse Sino Biological Cell Lysates 
    Browse ProSpec Recombinant Proteins
    Cloud-Clone Corp. Proteins for SLC16A11 

    Gene Ontology (GO): 2 cellular component terms (GO ID links to tree view):    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0005886plasma membrane IEA--
    GO:0016021integral to membrane IEA--

    SLC16A11 for ontologies           About GeneDecksing



    SLC16A11 Antibody Products: 
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    (According to HGNC, IUPHAR, InterPro, ProtoNet, UniProtKB, and/or BLOCKS, Sets of similar genes according to GeneDecks)
    About This Section
    HGNC Gene Families: 
    SLC: Solute carriers

    IUPHAR Guide to PHARMACOLOGY protein family classification: Monocarboxylate transporter 11 
    SLC16 family of monocarboxylate transporters

    3 InterPro protein domains:
     IPR020846 MFS_dom
     IPR011701 MFS
     IPR016196 MFS_dom_general_subst_transpt

    Graphical View of Domain Structure for InterPro Entry Q8NCK7

    ProtoNet protein and cluster: Q8NCK7

    UniProtKB/Swiss-Prot: MOT11_HUMAN, Q8NCK7
    Similarity: Belongs to the major facilitator superfamily. Monocarboxylate porter (TC 2.A.1.13) family


    SLC16A11 for domains           About GeneDecksing


    (According to 1UniProtKB, Genatlas, LifeMap Discovery™, IUBMB, and/or 2DME, Human phenotypes from GenomeRNAi, Animal models from MGI Mar 06 2013, inGenious Targeting Laboratory, genOway,
    bound targets from SABiosciences, miRNA Gene Targets from miRTarBase, shRNA from OriGene, RNAi from EMD Millipore, siRNAs from OriGene, QIAGEN, microRNA from QIAGEN, Gene Editing from DNA2.0, Sirion Biotech, Clones from EMD Millipore, OriGene, SwitchGear Genomics, GenScript, Sino Biological, DNA2.0, Vector BioLabs, and Sirion Biotech, Cell Lines from GenScript, LifeMap BioReagents, In Situ Hybridization Assays from Advanced Cell Diagnostics, Ontologies according to Gene Ontology Consortium 01 Oct 2013 via Entrez Gene.)
    About This Section

    Molecular Function:

         UniProtKB/Swiss-Prot Summary: MOT11_HUMAN, Q8NCK7
    Function: Proton-linked monocarboxylate transporter. Catalyzes the rapid transport across the plasma membrane of
    many monocarboxylates (By similarity)

         Gene Ontology (GO): 1 molecular function term (GO ID links to tree view):    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0015293symporter activity IEA--
         
    SLC16A11 for ontologies           About GeneDecksing


    Phenotypes:
         2 GenomeRNAi human phenotypes for SLC16A11:
     Decreased homologous recombina  Increased S DNA content 

    Animal Models:
       inGenious Targeting Laboratory - Custom generated mouse model solutions for SLC16A11 
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    miRNA
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    (Pathways according to EMD Millipore, R&D Systems, Cell Signaling Technology, KEGG, PharmGKB, BioSystems, Sino Biological, Reactome, Tocris Bioscience, GeneGo (Thomson Reuters), QIAGEN, and/or UniProtKB, Sets of similar genes according to GeneDecks, Interaction Networks according to SABiosciences, and/or STRING, Interactions according to 1UniProtKB, 2MINT, 3I2D, and/or 4STRING, with links to IntAct and Ensembl, Ontologies according to Gene Ontology Consortium 01 Oct 2013 via Entrez Gene).
    About This Section



    Interactions:

        Search SABiosciences Gene Network CentralTM Interacting Genes and Proteins Networks for SLC16A11

    Gene Ontology (GO): 1 biological process term (GO ID links to tree view):    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0055085transmembrane transport ----

    SLC16A11 for ontologies           About GeneDecksing



    (Chemical Compounds according to UniProtKB, Enzo Life Sciences, EMD Millipore, Tocris Bioscience HMDB, BitterDB, and/or Novoseek, Ligands according to IUPHAR, and Drugs according to DrugBank, Enzo Life Sciences, and/or PharmGKB, with drugs/clinical trials/news search links to CenterWatch)
    About This Section
    Browse Small Molecules at EMD Millipore
    Browse drugs & compounds from Enzo Life Sciences

    Browse Tocris compounds for SLC16A11 (MOT11)

    Search CenterWatch for drugs/clinical trials and news about SLC16A11 / MOT11

    (Secondary structures according to fRNAdb,
    GenBank/EMBL/DDBJ Accessions according to
    Unigene (Build 236 Homo sapiens; Apr 25 2013) or GenBank,
    RefSeq according to Entrez Gene,
    DOTS (version 10), and/or AceView, transcript ids from Ensembl with links to UCSC,
    Conferences by KenesGroup, exon structure from GeneLoc, alternative splicing isoforms according to ASD and/or ECgene,
    RNAi Products from EMD Millipore,
    siRNAs from OriGene, QIAGEN, shRNA from OriGene, microRNA from QIAGEN,
    Tagged/untagged cDNA clones from OriGene, SwitchGear Genomics, GenScript, DNA2.0, Vector BioLabs, Sirion Biotech, Primers from OriGene, SABiosciences, and/or QIAGEN )
    About This Section

    REFSEQ mRNAs for SLC16A11 gene: 
    NM_153357.1  

    Unigene Cluster for SLC16A11:

    Solute carrier family 16, member 11 (monocarboxylic acid transporter 11)
    Hs.336564  [show with all ESTs]
    Unigene Representative Sequence: AK074674
    4 Ensembl transcripts including schematic representations, and UCSC links where relevant:
    ENST00000308009(uc002gei.1) ENST00000573338 ENST00000574600 ENST00000447225

    miRNA
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    Inhib. RNA
    Products:
         
    Browse for Gene Knock-down Tools from EMD Millipore
    OriGene RNAi products in human, mouse, rat for SLC16A11
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      QIAGEN QuantiTect SYBR Green Assays in human, mouse, rat SLC16A11
      QIAGEN QuantiFast Probe-based Assays in human, mouse, rat SLC16A11

    Additional mRNA sequence: 

    AK074674.1 BC093860.1 BC093886.1 BC143369.1 

    2 DOTS entries:

    DT.40212537  DT.40129865 

    13 AceView cDNA sequences:

    AK074674 BX284081 BG674182 NM_153357 AW297495 BG696982 BU684425 AI742291 
    R72227 AI088069 AI802877 AA890700 AA706593 

    GeneLoc Exon Structure


    (RNA expression data according to H-InvDB, NONCODE, miRBase, and RNAdb, Expression images according to data from BioGPS, Illumina Human BodyMap, and CGAP SAGE, Sets of similar genes according to GeneDecks, in vivo and in vitro expression data from LifeMap Discovery™, plus additional links to Genevestigator, and/or SOURCE, and/or BioGPS, and/or UniProtKB,
    PCR Arrays from SABiosciences, Primers from OriGene, SABiosciences, and/or QIAGEN, In Situ Hybridization Assays from Advanced Cell Diagnostics)
    About This Section

    SLC16A11 expression in normal human tissues (normalized intensities)      SLC16A11 embryonic expression: see
    See probesets specificity/sensitivity at GeneAnnot
    About this imageBioGPS <intensity>2/3
    CGAP TAG: --
    SLC16A11 Expression
    About this image


    SLC16A11 expression in embryonic tissues and stem cells    About this table
    Data from LifeMap, the Embryonic Development and Stem Cells Database 
     5/1 selected tissues (see all 1) fully expand
     
     Ovary (Reproductive System)
             Cumulus Cells Antral Follicle

    See SLC16A11 Protein Expression from SPIRE MOPED and PaxDB
    Genevestigator expression for SLC16A11

    SOURCE GeneReport for Unigene cluster: Hs.336564
        SABiosciences Custom PCR Arrays for SLC16A11
    Primer
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    OriGene qSTAR qPCR primer pairs in human, mouse for SLC16A11
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    In Situ
    Assay Products:
     

     
    Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for SLC16A11

    (Orthologs according to 1,2HomoloGene (2older version, for species not in 1newer version), 3euGenes, 4SGD , 5MGI Mar 06 2013, with possible further links to Flybase and/or WormBase, and/or 6Ensembl pan taxonomic compara , Gene Trees according to Ensembl and TreeFam)
    About This Section

    This gene was present in the common ancestor of animals.

    Orthologs for SLC16A11 gene from 5/11 species (see all 11)    About this table
    Organism Taxonomic
    classification
    Gene Description Human
    Similarity
    Orthology
    Type
    Details
    mouse
    (Mus musculus)
    Mammalia Slc16a111 , 5 solute carrier family 16 (monocarboxylic acid transporters), more1, 5 84.12(n)1
    87.47(a)1
      11 (42.99 cM)5
    2168671  NM_153081.31  NP_694721.21 
     702127525 
    chicken
    (Gallus gallus)
    Aves SLC16A116
    solute carrier family 16, member 11 (monocarboxyli...
    42(a)
    1 ↔ 1
    JH375607.1(3615-6310)
    lizard
    (Anolis carolinensis)
    Reptilia --
    Uncharacterized protein
    24(a)
    possible ortholog
    1(225466406-225473739)
    fruit fly
    (Drosophila melanogaster)
    Insecta Mct16
    CG116656
    (see all 5)
    --
    19(a)
    17(a)
    (see all 5)
    many ↔ many
    many ↔ many
    (see all 5)
    X(2088616-2099406)
    2R(1529160-1540288)
    worm
    (Caenorhabditis elegans)
    Secernentea C10E2.66
    Y19D10A.126
    (see all 6)
    Protein Y19D10A.12
    (see all 6)
    20(a)
    19(a)
    (see all 6)
    many ↔ many
    many ↔ many
    (see all 6)
    X(16767438-16770500)
    V(2375043-2379505)


    ENSEMBL Gene Tree for SLC16A11 (if available)
    TreeFam Gene Tree for SLC16A11 (if available)

    (Paralogs according to 1HomoloGene,
    2Ensembl, and 3SIMAP, Pseudogenes according to 4Pseudogene.org Build 68)
    About This Section
    Paralogs for SLC16A11 gene
    SLC16A42  SLC16A32  SLC16A102  SLC16A52  SLC16A22  SLC16A62  SLC16A82  SLC16A142  
    SLC16A72  SLC16A12  SLC16A122  SLC16A92  SLC16A132  
    7 SIMAP similar genes for SLC16A11 using alignment to 3 protein entries:     MOT11_HUMAN (see all proteins):
    SLC16A13    SLC16A3    SLC16A8    SLC16A7    SLC16A12    SLC16A1
    SLC16A5

    SLC16A11 for paralogs           About GeneDecksing



    (SNPs/Variants according to the 1NCBI SNP Database, 2Ensembl, 3PupaSUITE, 4UniProtKB, and DNA2.0, Linkage Disequilibrium by HapMap, Structural Variations(CNVs/InDels/Inversions) from the Database of Genomic Variants, Mutations from the Human Gene Mutation Database (HGMD) and the Locus Specific Mutation Databases (LSDB), Blood group antigen gene mutations by BGMUT, Resequencing Primers from QIAGEN, Cancer Mutation PCR Arrays and Assays and Copy Number PCR Arrays from SABiosciences)
    About This Section

    10/151 SNPs in SLC16A11 are shown (see all 151)    About this table     
    Genomic DataTranscription Related DataAllele Frequencies
    SNP IDValidClinical
    significance
    Chr 17 posSequence#AA
    Chg
    TypeMore#Allele
    freq
    PopTotal
    sample
    More
    ----------
    rs1874220061,2
    --6944555(+) ACAGGC/GTATAG 1 -- ds50010--------
    rs1180651161,2
    F--6944615(+) ATTTCC/GCTCAG 1 -- ds50011Minor allele frequency- G:0.02NA 120
    rs1141449531,2
    C,F--6944623(+) CAGGCC/ACATAG 1 -- ds50011Minor allele frequency- A:0.03WA 118
    rs1918125461,2
    --6944670(+) AGGTCA/TGGGAA 1 -- ds50010--------
    rs75040251,2
    C--6944676(+) GGGAAC/ATAGGG 1 -- ds50012Minor allele frequency- A:0.00NA 4
    rs795248591,2
    F--6944725(+) AACCCG/ACCCCC 1 -- ds50011Minor allele frequency- A:0.02WA 118
    rs2016529991,2
    --6945044(+) ACAGCA/GAGACT 2 S L mis10--------
    rs2010748781,2
    C--6945080(+) CCGTCT/GCTGGG 2 /E /A mis11Minor allele frequency- G:0.00EU 645
    rs754935931,2
    C,F--6945087(+) TGGGGG/TAGGCG 2 T P mis13Minor allele frequency- T:0.01EA NA EU 3838
    rs360004461,2
    C,F--6945127(-) AGGGCG/ACTGCC 2 /A syn12Minor allele frequency- A:0.00NA 2876

    HapMap Linkage Disequilibrium report for SLC16A11 (6944949 - 6947242 bp)

    Structural Variations
         Database of Genomic Variants (DGV) 4 variations for SLC16A11:    About this table     
    Variant IDTypeSubtypePubMed ID
    esv2422288CNV Deletion17116639
    nsv457659CNV Loss19166990
    nsv907634CNV Loss21882294
    nsv482199CNV Gain20164927

    SABiosciences Cancer Mutation PCR Assays
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    (in which this Gene is Involved, According to MalaCards, OMIM, UniProtKB, the University of Copenhagen DISEASES database, Conferences by KenesGroup, Genatlas, GeneTests, GAD, HuGE Navigator, and/or TGDB.)
    About This Section

    SLC16A11 for disorders           About MalaCards

    SLC16A11 for disorders           About GeneDecksing

    Genetic Association Database (GAD): SLC16A11

    Export disorders for SLC16A11 gene to outside databases

    (in PubMed. Associations of this gene to articles via 1Entrez Gene, 2UniProtKB/Swiss-Prot, 3HGNC, 4GAD, 5PharmGKB, 6HMDB, 7DrugBank, 8UniProtKB/TrEMBL, 9 Novoseek, and/or 10fRNAdb)
    About This Section

    PubMed articles for SLC16A11 gene integrated from 9 sources:
    (articles sorted by number of sources associating them with SLC16A11)
        Utopia: connect your pdf to the dynamic
    world of online information

    1. Genome-wide association with bone mass and geometry in the Framingham Heart Study. (PubMed id 17903296)4 Kiel D.P....Karasik D. (2007)
    2. A genome-wide association study for blood lipid phenotypes in the Framingham Heart Study. (PubMed id 17903299)4 Kathiresan S....Cupples L.A. (2007)
    3. Genome-wide association with select biomarker traits in the Framingham Heart Study. (PubMed id 17903293)4 Benjamin E.J....Vasan R.S. (2007)
    4. Signal sequence and keyword trap in silico for selection of full- length human cDNAs encoding secretion or membrane proteins from oligo- capped cDNA libraries. (PubMed id 16303743)1 Otsuki T....Isogai T. (2005)
    5. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PubMed id 15489334)2 Gerhard D.S....Malek J. (2004)
    6. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PubMed id 14702039)2 Ota T.... Sugano S. (2004)
    7. The SLC16 gene family-from monocarboxylate transporters (MCTs) to aromatic amino acid transporters and beyond. (PubMed id 12739169)1 Halestrap A.P. and Meredith D. (2004)
    8. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PubMed id 12477932)1 Strausberg R.L....Marra M.A. (2002)

    (in PubMed, OMIM, and NCBI Bookshelf)
    About This Section
     ANDOR
    Aliases
    Free Text  

      Query String
    PubMed
    OMIM
    NCBI Bookshelf
      (Note: In FireFox, select the above section and copy using Ctrl-C)

    (According to Entrez Gene, HGNC, AceView, euGenes, Ensembl, miRBase, ECgene, Kegg, and/or H-InvDB)
    About This Section
    Entrez Gene: 162515 HGNC: 23093 AceView: SLC16A11 Ensembl:ENSG00000174326 euGenes: HUgn162515
    ECgene: SLC16A11 H-InvDB: SLC16A11

    (According to HUGE)
    About This Section
      --

    (According to PharmGKB, ATLAS, HORDE, IMGT, LEIDEN, UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL,
    Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot)
    About This Section
    NameDescription
    PharmGKB entry for SLC16A11 Pharmacogenomics, SNPs, Pathways

    (Patent information from GeneIP,
    Licensable technologies from WIS Yeda, Salk, Tufts,
    IP news from LifeMap Sciences, Inc.)
    About This Section
    Patent Information for SLC16A11 gene:
    Search GeneIP for patents involving SLC16A11

    GeneCards and IP:
    Japan Patent Office Licenses GeneCards     European Patent Office Licenses GeneCards     Improving the IP Search



    (Antibodies, recombinant proteins, and assays from EMD Millipore, R&D Systems, OriGene, QIAGEN, GenScript, Cell Signaling Technology, SABiosciences, Novus Biologicals, Sino Biological, Enzo Life Sciences, Abcam, ProSpec, Cloud-Clone Corp., Thermo Fisher Scientific, LSBio, Gene Editing from DNA2.0 and Sirion Biotech, Clones from EMD Millipore, OriGene, GenScript, Sino Biological, DNA2.0, SwitchGear Genomics, Vector BioLabs, Sirion Biotech, Cell lines from GenScript, and LifeMap BioReagents, PCR Arrays from SABiosciences, Drugs and/or compounds from EMD Millipore, Tocris Bioscience, and/or Enzo Life Sciences, In Situ Hybridization Assays from
    Advanced Cell Diagnostics, Animal models from inGenious Targeting Laboratory, genOway)
    About This Section

     
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    GeneCards Homepage - Last full update: 23 Oct 2013 - Incrementals: 3 Nov 2013 , 7 Nov 2013 , 23 Jan 2014

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    (GIFtS: 73)
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