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GIFtS
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SLC16A11 Gene

protein-coding GIFtS: 40
GCID: GC17M006944

solute carrier family 16, member 11 (monocarboxylic acid...

(Previous names: solute carrier family 16 (monocarboxylic acid transporters),...)

Search for SLC16A11
in

MalaCards

our new
Human Malady Compendium

(According to ¹HGNC, ²Entrez Gene,
³UniProtKB/Swiss-Prot, ⁴UniProtKB/TrEMBL, ⁵OMIM, ⁶GeneLoc, ⁷Ensembl, ⁸DME, ⁹miRBase, and/or ¹⁰fRNAdb)
About This Section

Aliases
Solute Carrier Family 16, Member 11 (Monocarboxylic Acid Transporter 11)¹ ²		MCT 11² ³
MCT11¹ ² ³		FLJ90193¹
Solute Carrier Family 16 (Monocarboxylic Acid Transporters), Member 11¹ ²		Monocarboxylate Transporter 11²
Solute Carrier Family 16 Member 11² ³

External Ids:	HGNC: 23093¹	Entrez Gene: 162515²	Ensembl: ENSG00000174326⁷	UniProtKB: Q8NCK7³

Export aliases for SLC16A11 gene to outside databases

Previous GC identifers: GC17M006889 GC17M007145 GC17M006885 GC17M006838

(According to Entrez Gene, Tocris Bioscience, Wikipedia's Gene Wiki, PharmGKB,
UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL)
About This Section

UniProtKB/Swiss-Prot: MOT11_HUMAN, Q8NCK7

Function: Proton-linked monocarboxylate transporter. Catalyzes the rapid transport across the plasma membrane of many

monocarboxylates (By similarity)

(According to GeneLoc and/or HGNC, and/or
Entrez Gene (NCBI build 37),
and/or miRBase,
Genomic Views according to UCSC (hg19) and Ensembl (release 69), Regulatory elements and Epigenetics data according to QIAGEN, SABiosciences, and/or SwitchGear Genomics)
About This Section

RefSeq DNA sequence:

NC_000017.10 NC_018928.1 NT_010718.16

Regulatory elements:

SABiosciences Regulatory transcription factor binding sites in the SLC16A11 gene promoter:
SRF USF1 Elk-1 Sp1 SRF (504 AA) Bach2 USF2 USF-1:USF-2 SREBP-1a USF-1
Other transcription factors

SwitchGear Promoter luciferase reporter plasmid: SLC16A11 promoter sequence

Search SABiosciences Chromatin IP Primers for SLC16A11

Epigenetics:

QIAGEN PyroMark CpG Assay predesigned Pyrosequencing DNA Methylation assays in human, mouse, rat SLC16A11

Genomic Location:
Genomic View: UCSC Golden Path with GeneCards custom track

Entrez Gene cytogenetic band: 17p13.1 Ensembl cytogenetic band: 17p13.1 HGNC cytogenetic band: 17p13.2

SLC16A11 Gene in genomic location: bands according to Ensembl, locations according to (and/or Entrez Gene and/or Ensembl if different)
SLC16A11 gene location

GeneLoc information about chromosome 17 GeneLoc Exon Structure

GeneLoc location for GC17M006944: view genomic region (about GC identifiers)

Start:	6,944,949 bp from pter	End:	6,947,242 bp from pter
Size:	2,294 bases	Orientation:	minus strand

(According to ¹UniProtKB, HORDE, neXtProt, Ensembl, and/or Reactome, Modification sites according to ²PhosphoSitePlus, Specific Peptides from DME, Protein expression images according to data from SPIRE MOPED and PaxDb, RefSeq according to NCBI, PDB rendering according to OCA and/or Proteopedia, Recombinant Proteins from EMD Millipore, R&D Systems, GenScript, Enzo Life Sciences, OriGene, Novus Biologicals, Sino Biological, ProSpec, and/or Uscn,
Biochemical Assays by EMD Millipore, R&D Systems, OriGene, GenScript, Cell Signaling Technology, Enzo Life Sciences, and/or Uscn, Ontologies according to Gene Ontology Consortium 01 Mar 2013 and Entrez Gene, Antibodies by EMD Millipore, R&D Systems, GenScript, Cell Signaling Technology, OriGene, Novus Biologicals, Thermo Fisher Scientific, Abcam, and/or Uscn)
About This Section

UniProtKB/Swiss-Prot: MOT11_HUMAN, Q8NCK7 (See protein sequence)

Recommended Name: Monocarboxylate transporter 11

Size: 471 amino acids; 47791 Da

Subcellular location: Cell membrane; Multi-pass membrane protein (Potential)

Caution: It is uncertain whether Met-1 or Met-25 is the initiator

Explore the universe of human proteins at neXtProt for SLC16A11: NX_Q8NCK7

Post-translational modifications:

View modification sites using PhosphoSitePlus²

View neXtProt modification sites for NX_Q8NCK7

SLC16A11 Protein expression data from MOPED and PaxDb: About this image

REFSEQ proteins: NP_699188.1

ENSEMBL proteins:

ENSP00000310490 ENSP00000460927 ENSP00000394449

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Gene Ontology (GO): 2 cellular component terms (GO ID links to tree view): About this table

GO ID	Qualified GO term	Evidence	PubMed IDs
GO:0005886	plasma membrane	IEA	--
GO:0016021	integral to membrane	IEA	--

SLC16A11 for ontologies About GeneDecksing

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(According to InterPro, ProtoNet, UniProtKB, and/or BLOCKS, Sets of similar genes according to GeneDecks)
About This Section

SLC16A11 for domains About GeneDecksing

3 InterPro domains/families:

IPR020846 MFS_dom

IPR011701 MFS

IPR016196 MFS_dom_general_subst_transpt

Graphical View of Domain Structure for InterPro Entry Q8NCK7

ProtoNet protein and cluster: Q8NCK7

UniProtKB/Swiss-Prot: MOT11_HUMAN, Q8NCK7

Similarity: Belongs to the major facilitator superfamily. Monocarboxylate porter (TC 2.A.1.13) family

(According to ¹UniProtKB, Genatlas, LifeMap Discovery™, IUBMB, and/or ²DME, Human phenotypes from GenomeRNAi, Animal models from MGI Mar 06 2013,
bound targets from SABiosciences, miRNA Gene Targets from miRTarBase shRNA from OriGene, RNAi from EMD Millipore, siRNAs from OriGene, QIAGEN, microRNA from QIAGEN, Gene Editing from DNA2.0, Clones from EMD Millipore, OriGene, SwitchGear Genomics, GenScript, Sino Biological, DNA2.0, and Vector BioLabs, Cell Lines from GenScript, LifeMap BioReagents, In Situ Hybridization Assays from Advanced Cell Diagnostics, Ontologies according to Gene Ontology Consortium 01 Mar 2013 via Entrez Gene.)
About This Section

Function Summary:

UniProtKB/Swiss-Prot: MOT11_HUMAN, Q8NCK7

Function: Proton-linked monocarboxylate transporter. Catalyzes the rapid transport across the plasma membrane of many

monocarboxylates (By similarity)

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Gene Ontology (GO): 1 molecular function term (GO ID links to tree view): About this table

GO ID	Qualified GO term	Evidence	PubMed IDs
GO:0015293	symporter activity	IEA	--

SLC16A11 for ontologies About GeneDecksing

2 GenomeRNAi human phenotypes for SLC16A11:

Decreased homologous recombina

Increased S DNA content

(Pathways according to EMD Millipore, R&D Systems, Cell Signaling Technology, KEGG, PharmGKB, BioSystems, Reactome, Tocris Bioscience, GeneGo (Thomson Reuters), QIAGEN, and/or UniProtKB, Sets of similar genes according to GeneDecks, Interaction Networks according to SABiosciences, and/or STRING, Interactions according to ¹UniProtKB, ²MINT, ³I2D, and/or ⁴STRING, with links to IntAct and Ensembl, Ontologies according to Gene Ontology Consortium 01 Mar 2013 via Entrez Gene).
About This Section

Interactions:

Search SABiosciences Gene Network Central^TM Interacting Genes and Proteins Networks for SLC16A11

Gene Ontology (GO): 1 biological process term (GO ID links to tree view): About this table

GO ID	Qualified GO term	Evidence	PubMed IDs
GO:0055085	transmembrane transport	--	--

SLC16A11 for ontologies About GeneDecksing

(Chemical Compounds according to UniProtKB, Enzo Life Sciences, EMD Millipore, Tocris Bioscience HMDB, BitterDB, and/or Novoseek, and Drugs according to DrugBank, Enzo Life Sciences, and/or PharmGKB, with drugs/clinical trials/news search links to CenterWatch)
About This Section

Browse Small Molecules at EMD Millipore

Browse drugs & compounds from Enzo Life Sciences

Browse Tocris compounds for SLC16A11
Search CenterWatch for drugs/clinical trials and news about SLC16A11 / MOT11

(Secondary structures according to fRNAdb,
GenBank/EMBL/DDBJ Accessions according to
Unigene (Build 235 Homo sapiens; Mar 10 2013) or GenBank,
RefSeq according to Entrez Gene,
DOTS (version 10), and/or AceView, transcript ids from Ensembl with links to UCSC,
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About This Section

REFSEQ mRNAs for SLC16A11 gene:

NM_153357.1

Unigene Cluster for SLC16A11:

Solute carrier family 16, member 11 (monocarboxylic acid transporter 11)

Hs.336564 [show with all ESTs]

Unigene Representative Sequence: AK074674

4 Ensembl transcripts including schematic representations, and UCSC links where relevant:

ENST00000308009(uc002gei.1) ENST00000573338 ENST00000574600 ENST00000447225

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Additional cDNA sequence:

AK074674.1 BC093860.1 BC093886.1 BC143369.1

2 DOTS entries:

DT.40212537 DT.40129865

13 AceView cDNA sequences:

NM_153357 BX284081 BG674182 AK074674 AW297495 BU684425 AI742291 BG696982

R72227 AI088069 AI802877 AA890700 AA706593

GeneLoc Exon Structure

(RNA expression data according to H-InvDB, NONCODE, miRBase, and RNAdb, Expression images according to data from BioGPS, Illumina Human BodyMap, and CGAP SAGE, Sets of similar genes according to GeneDecks, in vivo and in vitro expression data from LifeMap Discovery™, plus additional links to Genevestigator, and/or SOURCE, and/or BioGPS, and/or UniProtKB,
PCR Arrays from SABiosciences, Primers from OriGene, SABiosciences, and/or QIAGEN, In Situ Hybridization Assays from Advanced Cell Diagnostics)
About This Section

SLC16A11 expression in normal human tissues (normalized intensities)
See probesets specificity/sensitivity at GeneAnnot
About this imageBioGPS
CGAP TAG: --

About this image

SLC16A11 expression in embryonic tissues and stem cells

Expression by the Database of Embryonic development, Stem cell research, and Regenerative medicine About this table

1 LifeMap In Vivo Development Anatomical Compartment/Cell

Tissue

Anatomical Compartment

Cell

Category (developmental path)

Ovary

Antral Follicle

Cumulus Cells

Ovary

Expression:

Positive

Negative

Selective marker

Experimental details:

Curated

Microarrays

In-situ hybridization

See SLC16A11 Protein Expression from SPIRE MOPED and PaxDB
Genevestigator expression for SLC16A11

SOURCE GeneReport for Unigene cluster: Hs.336564

SABiosciences Custom PCR Arrays for SLC16A11

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In Situ
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(Orthologs according to ^1,2HomoloGene (²older version, for species not in ¹newer version), ³euGenes, ⁴SGD , ⁵MGI Mar 06 2013, with possible further links to Flybase and/or WormBase, and/or ⁶Ensembl pan taxonomic compara , Gene Trees according to Ensembl and TreeFam)
About This Section

This gene was present in the common ancestor of animals.

Orthologs for SLC16A11 gene from 3/13 species (see all 13) About this table

Organism	Taxonomic classification	Gene	Description	Human Similarity	Orthology Type	Details
chicken (Gallus gallus)	Aves	SLC16A11⁶	--	40(a)	1 ↔ 1	Un(20938890-20941600)
zebrafish (Danio rerio)	Actinopterygii	BX322601.1⁶	--	35(a)	1 → many	7(21199624-21213578)
fruit fly (Drosophila melanogaster)	Insecta	CG11665⁶ Sln⁶	Silnoon	17(a) 14(a)	many ↔ many many ↔ many	2R(1529160-1540288) 2R(7732831-7739829)

ENSEMBL Gene Tree for SLC16A11 (if available)
TreeFam Gene Tree for SLC16A11 (if available)

(Paralogs according to ¹HomoloGene,
²Ensembl, and ³SIMAP, Pseudogenes according to ⁴Pseudogene.org Build 68)
About This Section

Paralogs for SLC16A11 gene

SLC16A4² SLC16A3² SLC16A5² SLC16A10² SLC16A2² SLC16A6² SLC16A8² SLC16A14²

SLC16A7² SLC16A1² SLC16A12² SLC16A13² SLC16A9²

7 SIMAP similar genes for SLC16A11 using alignment to 3 protein entries: MOT11_HUMAN (see all proteins):

SLC16A13 SLC16A3 SLC16A8 SLC16A7 SLC16A12 SLC16A1

SLC16A5

SLC16A11 for paralogs About GeneDecksing

(SNPs/Variants according to the ¹NCBI SNP Database, ²Ensembl, ³PupaSUITE, UniProtKB, and DNA2.0, Linkage Disequilibrium by HapMap, Structural Variations(CNVs/InDels/Inversions) from the Database of Genomic Variants, Mutations from the Human Gene Mutation Database (HGMD) and the Locus Specific Mutation Databases (LSDB), Blood group antigen gene mutations by BGMUT, Resequencing Primers from QIAGEN, Cancer Mutation PCR Arrays and Assays and Copy Number PCR Arrays from SABiosciences)
About This Section

SNP ID	Valid	Clinical significance	Chr 17 pos	Sequence	#	AA Chg	Type	More	#	Allele freq	Pop	Total sample	More
Genomic Data					Transcription Related Data				Allele Frequencies
				--	--	--		--	--
rs187422006^1,2		--	6944555(+)	`ACAGGC/GTATAG`	1	--	ds500¹		0	--	--	--	--
rs118065116^1,2	F,	--	6944615(+)	`ATTTCC/GCTCAG`	1	--	ds500¹		1		NA	120
rs114144953^1,2	C,F,	--	6944623(+)	`NNNNCC/ACATAG`	1	--	ds500¹		1		WA	118
rs191812546^1,2		--	6944670(+)	`AGGTCA/TGGGAA`	1	--	ds500¹		0	--	--	--	--
rs7504025^1,2	C	--	6944676(+)	`GGGAAC/ATAGGG`	1	--	ds500¹		2		NA	4
rs79524859^1,2	F,	--	6944725(+)	`AACCCG/ACCCCC`	1	--	ds500¹		1		WA	118
rs201652999^1,2		--	6945044(+)	`ACAGCA/GAGACT`	2	S L	mis¹		0	--	--	--	--
rs201074878^1,2	C,	--	6945080(+)	`CCGTCT/GCTGGG`	2	/E /A	mis¹		1		EU	645
rs75493593^1,2	C,F,	--	6945087(+)	`TGGGGG/TAGGCG`	2	T P	mis¹		3		EA NA EU	3838
rs36000446^1,2	C,F,	--	6945127(-)	`AGGGCG/ACTGCC`	2	/A	syn¹		2		NA	2876

HapMap Linkage Disequilibrium report for SLC16A11 (6944949 - 6947242 bp)
Structural Variations (Copy Number Variations, Insertions/Deletions, Inversions)
Database of Genomic Variants (DGV) variations for SLC16A11: --

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(in which this Gene is Involved, According to MalaCards, OMIM, UniProtKB, the University of Copenhagen DISEASES database, Genatlas, GeneTests, GAD, HuGE Navigator, and/or TGDB.)
About This Section

(in PubMed. Associations of this gene to articles via ¹Entrez Gene, ²UniProtKB/Swiss-Prot, ³HGNC, ⁴GAD, ⁵PharmGKB, ⁶HMDB, ⁷DrugBank, ⁸UniProtKB/TrEMBL, ⁹ Novoseek, and/or ¹⁰fRNAdb)
About This Section

PubMed articles for SLC16A11 gene integrated from 9 sources:
(articles sorted by number of sources associating them with SLC16A11)

Utopia: connect your pdf to the dynamic
world of online information

Signal sequence and keyword trap in silico for selection of full- length human cDNAs encoding secretion or membrane proteins from oligo- capped cDNA libraries. (PubMed id 16303743)¹ Otsuki T....Isogai T. (2005)
The SLC16 gene family-from monocarboxylate transporters (MCTs) to aromatic amino acid transporters and beyond. (PubMed id 12739169)¹ Halestrap A.P. and Meredith D. (2004)
The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PubMed id 15489334)² Gerhard D.S....Malek J. (2004)
Complete sequencing and characterization of 21,243 full-length human cDNAs. (PubMed id 14702039)² Ota T.... Sugano S. (2004)
Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PubMed id 12477932)¹ Strausberg R.L....Marra M.A. (2002)

(in PubMed, OMIM, and NCBI Bookshelf)
About This Section

		AND	OR
Aliases
Free Text

Query String		PubMed OMIM NCBI Bookshelf
	(Note: In FireFox, select the above section and copy using Ctrl-C)

(According to Entrez Gene, HGNC, AceView, euGenes, Ensembl, miRBase, ECgene, Kegg, and/or H-InvDB)
About This Section

Entrez Gene: 162515	HGNC: 23093	AceView: SLC16A11	Ensembl:ENSG00000174326	euGenes: HUgn162515
ECgene: SLC16A11	H-InvDB: SLC16A11

(According to HUGE)
About This Section

(According to PharmGKB, ATLAS, HORDE, IMGT, LEIDEN, UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL,
Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot)
About This Section

Name	Description
PharmGKB entry for SLC16A11	Pharmacogenomics, SNPs, Pathways

Intellectual Property for SLC16A11 gene
(Patent information from GeneIP, Licensable technologies from WIS Yeda, Salk, Tufts, IP news from LifeMap Sciences, Inc.)

About This Section

Patent Information for SLC16A11 gene:
Search GeneIP for patents involving SLC16A11

GeneCards and IP:
Japan Patent Office Licenses GeneCards European Patent Office Licenses GeneCards Improving the IP Search

(Antibodies, recombinant proteins, and assays from EMD Millipore, R&D Systems, OriGene, QIAGEN, GenScript, Cell Signaling Technology, SABiosciences, Novus Biologicals, Sino Biological, Enzo Life Sciences, Abcam, ProSpec, Uscn, Thermo Fisher Scientific, Gene Editing from DNA2.0, Clones from EMD Millipore, OriGene, GenScript, Sino Biological, DNA2.0, SwitchGear Genomics, Vector BioLabs, Cell lines from GenScript and LifeMap BioReagents, PCR Arrays from SABiosciences, Drugs and/or compounds from EMD Millipore, Tocris Bioscience, and/or Enzo Life Sciences),
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About This Section


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GeneCards Homepage - Last full update: 19 Mar 2013 - Incrementals: 21 Mar 2013 , 15 Apr 2013 , 26 Apr 2013

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Category			VWF (GIFTS: 73) von Willebrand factor
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SLC16A11 Gene

solute carrier family 16, member 11 (monocarboxylic acid...

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SLC16A11 Gene

solute carrier family 16, member 11 (monocarboxylic acid...

Aliasesfor SLC16A11 gene

Summariesfor SLC16A11 gene

Genomic Viewsfor SLC16A11 gene

Proteinsfor SLC16A11 gene

Protein Domains /Familiesfor SLC16A11 gene

Functionfor SLC16A11 gene

Pathways & Interactionsfor SLC16A11 gene

Drugs & Compoundsfor SLC16A11 gene

Transcriptsfor SLC16A11 gene

Expression for SLC16A11 gene

Orthologsfor SLC16A11 gene

Paralogsfor SLC16A11 gene

Genomic Variantsfor SLC16A11 gene

Disorders / Diseasesfor SLC16A11 gene

Publicationsfor SLC16A11 gene

External Searches for SLC16A11 gene

Genome Databases showing SLC16A11 gene

Other Databases showing SLC16A11 gene

Specialized Databases showing SLC16A11 gene

Intellectual Propertyfor SLC16A11 gene

Productsfor SLC16A11 gene

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Aliases
for SLC16A11 gene

Summaries
for SLC16A11 gene

Genomic Views
for SLC16A11 gene

Proteins
for SLC16A11 gene

Protein Domains /
Families
for SLC16A11 gene

Function
for SLC16A11 gene

Pathways & Interactions
for SLC16A11 gene

Drugs & Compounds
for SLC16A11 gene

Transcripts
for SLC16A11 gene

Expression
for SLC16A11 gene

Orthologs
for SLC16A11 gene

Paralogs
for SLC16A11 gene

Genomic Variants
for SLC16A11 gene

Disorders / Diseases
for SLC16A11 gene

Publications
for SLC16A11 gene

Intellectual Property
for SLC16A11 gene

Products
for SLC16A11 gene