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Aliases for SLC16A1-AS1 Gene

Subcategory (RNA class) for SLC16A1-AS1 Gene

non-coding RNA

Quality Score for this RNA gene is

3

Aliases for SLC16A1-AS1 Gene

  • SLC16A1 Antisense RNA 1 2 3 5

External Ids for SLC16A1-AS1 Gene

Previous GeneCards Identifiers for SLC16A1-AS1 Gene

  • GC01P113502

Summaries for SLC16A1-AS1 Gene

GeneCards Summary for SLC16A1-AS1 Gene

SLC16A1-AS1 (SLC16A1 Antisense RNA 1) is an RNA Gene, and is affiliated with the non-coding RNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for SLC16A1-AS1 Gene

Genomics for SLC16A1-AS1 Gene

Regulatory Elements for SLC16A1-AS1 Gene

Enhancers for SLC16A1-AS1 Gene
GeneHancer Identifier Score Enhancer Sources TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Other Gene Targets for Enhancer

Enhancers around SLC16A1-AS1 on UCSC Golden Path with GeneCards custom track

Promoters for SLC16A1-AS1 Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters

ENSRs around SLC16A1-AS1 on UCSC Golden Path with GeneCards custom track

Genomic Location for SLC16A1-AS1 Gene

Chromosome:
1
Start:
112,956,415 bp from pter
End:
113,047,055 bp from pter
Size:
90,641 bases
Orientation:
Plus strand

Genomic View for SLC16A1-AS1 Gene

Genes around SLC16A1-AS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
SLC16A1-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for SLC16A1-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for SLC16A1-AS1 Gene

Proteins for SLC16A1-AS1 Gene

Post-translational modifications for SLC16A1-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for SLC16A1-AS1 Gene

Domains & Families for SLC16A1-AS1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for SLC16A1-AS1 Gene

Function for SLC16A1-AS1 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for SLC16A1-AS1 Gene

Localization for SLC16A1-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for SLC16A1-AS1 Gene

Pathways & Interactions for SLC16A1-AS1 Gene

SuperPathways for SLC16A1-AS1 Gene

No Data Available

Interacting Proteins for SLC16A1-AS1 Gene

Gene Ontology (GO) - Biological Process for SLC16A1-AS1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for SLC16A1-AS1 Gene

Drugs & Compounds for SLC16A1-AS1 Gene

No Compound Related Data Available

Transcripts for SLC16A1-AS1 Gene

mRNA/cDNA for SLC16A1-AS1 Gene

(7) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for SLC16A1-AS1 Gene

No ASD Table

Relevant External Links for SLC16A1-AS1 Gene

GeneLoc Exon Structure for
SLC16A1-AS1
ECgene alternative splicing isoforms for
SLC16A1-AS1

Expression for SLC16A1-AS1 Gene

mRNA expression in normal human tissues for SLC16A1-AS1 Gene

genes like me logo Genes that share expression patterns with SLC16A1-AS1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , mRNA Expression by UniProt/SwissProt and Protein tissue co-expression partners for SLC16A1-AS1 Gene

Orthologs for SLC16A1-AS1 Gene

Evolution for SLC16A1-AS1 Gene

ENSEMBL:
Gene Tree for SLC16A1-AS1 (if available)
TreeFam:
Gene Tree for SLC16A1-AS1 (if available)

No data available for Orthologs for SLC16A1-AS1 Gene

Paralogs for SLC16A1-AS1 Gene

No data available for Paralogs for SLC16A1-AS1 Gene

Variants for SLC16A1-AS1 Gene

Sequence variations from dbSNP and Humsavar for SLC16A1-AS1 Gene

SNP ID Clin Chr 01 pos Sequence Context AA Info Type
rs2696191 -- 112,962,527(-) TGGAT(A/C)ACTTG intron-variant
rs4839273 -- 112,959,930(+) TCTGC(A/C)GAAGT intron-variant
rs6680285 -- 112,961,393(+) agtgc(A/G)gtggt intron-variant
rs7524567 -- 112,962,036(+) tgtgc(A/G)agtgt intron-variant
rs11102570 -- 112,963,409(+) TCCAT(A/G)TGAAT intron-variant

Relevant External Links for SLC16A1-AS1 Gene

HapMap Linkage Disequilibrium report
SLC16A1-AS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for SLC16A1-AS1 Gene

Disorders for SLC16A1-AS1 Gene

Relevant External Links for SLC16A1-AS1

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
SLC16A1-AS1

No disorders were found for SLC16A1-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for SLC16A1-AS1 Gene

Publications for SLC16A1-AS1 Gene

  1. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 3 67

Products for SLC16A1-AS1 Gene

Sources for SLC16A1-AS1 Gene

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