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Aliases for SLAMF6P1 Gene

Aliases for SLAMF6P1 Gene

  • SLAM Family Member 6 Pseudogene 1 2 3 5

External Ids for SLAMF6P1 Gene

Previous GeneCards Identifiers for SLAMF6P1 Gene

  • GC00U933467
  • GC01P162417

Summaries for SLAMF6P1 Gene

GeneCards Summary for SLAMF6P1 Gene

SLAMF6P1 (SLAM Family Member 6 Pseudogene 1) is a Pseudogene.

Additional gene information for SLAMF6P1 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for SLAMF6P1 Gene

Genomics for SLAMF6P1 Gene

GeneHancer (GH) Regulatory Elements for SLAMF6P1 Gene

Promoters and enhancers for SLAMF6P1 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01I162421 Enhancer 0.8 ENCODE 9.1 -23.7 -23688 1.4 HDAC1 ATF1 TCF12 GATA2 EGR1 ATF7 CREM ZBTB2 NCOA1 ZEB2 LOC105373471 SPATA46 C1orf226 SLAMF6P1 UHMK1
GH01I162418 Enhancer 0.8 ENCODE 8.7 -25.9 -25869 1.6 HDAC1 GTF3C2 TCF12 POLR3A EGR1 SCRT2 CREM ZBTB2 NCOA1 ZEB2 LOC105373471 UHMK1 SPATA46 C1orf226 SLAMF6P1 SH2D1B
GH01I162411 Promoter/Enhancer 0.9 EPDnew ENCODE 6.1 -33.4 -33392 1.1 ZNF24 ETV6 ZNF592 SH2D1B SPATA46 C1orf226 SLAMF6P1 LOC105373471
GH01I162404 Enhancer 0.6 ENCODE 9 -40.5 -40469 1 DACH1 CBFA2T3 ATF2 ZNF316 EGR1 NFE2 FOS EMSY SLAMF6P1 C1orf226 SH2D1B SPATA46
GH01I162423 Enhancer 0.7 ENCODE 6.3 -22.3 -22323 0.2 BCOR HDAC1 TEAD4 CTBP1 ZNF766 VEZF1 SMARCE1 SOX6 NRF1 DPF2 SPATA46 C1orf226 SLAMF6P1 LOC105373471
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around SLAMF6P1 on UCSC Golden Path with GeneCards custom track

Genomic Locations for SLAMF6P1 Gene

Genomic Locations for SLAMF6P1 Gene
chr1:162,445,549-162,446,566
(GRCh38/hg38)
Size:
1,018 bases
Orientation:
Plus strand
chr1:162,415,339-162,415,676
(GRCh37/hg19)

Genomic View for SLAMF6P1 Gene

Genes around SLAMF6P1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
SLAMF6P1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for SLAMF6P1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for SLAMF6P1 Gene

Proteins for SLAMF6P1 Gene

Post-translational modifications for SLAMF6P1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for SLAMF6P1 Gene

Domains & Families for SLAMF6P1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for SLAMF6P1 Gene

Function for SLAMF6P1 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for SLAMF6P1 Gene

Localization for SLAMF6P1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for SLAMF6P1 Gene

Pathways & Interactions for SLAMF6P1 Gene

SuperPathways for SLAMF6P1 Gene

No Data Available

Interacting Proteins for SLAMF6P1 Gene

Gene Ontology (GO) - Biological Process for SLAMF6P1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for SLAMF6P1 Gene

Drugs & Compounds for SLAMF6P1 Gene

No Compound Related Data Available

Transcripts for SLAMF6P1 Gene

mRNA/cDNA for SLAMF6P1 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for SLAMF6P1 Gene

No ASD Table

Relevant External Links for SLAMF6P1 Gene

GeneLoc Exon Structure for
SLAMF6P1
ECgene alternative splicing isoforms for
SLAMF6P1

Expression for SLAMF6P1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for SLAMF6P1 Gene

mRNA differential expression in normal tissues according to GTEx for SLAMF6P1 Gene

This gene is overexpressed in Colon - Transverse (x18.7), Small Intestine - Terminal Ileum (x11.0), Kidney - Cortex (x6.3), Esophagus - Mucosa (x5.6), Muscle - Skeletal (x4.4), and Vagina (x4.0).

NURSA nuclear receptor signaling pathways regulating expression of SLAMF6P1 Gene:

SLAMF6P1
genes like me logo Genes that share expression patterns with SLAMF6P1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for SLAMF6P1 Gene

Orthologs for SLAMF6P1 Gene

Evolution for SLAMF6P1 Gene

ENSEMBL:
Gene Tree for SLAMF6P1 (if available)
TreeFam:
Gene Tree for SLAMF6P1 (if available)

No data available for Orthologs for SLAMF6P1 Gene

Paralogs for SLAMF6P1 Gene

No data available for Paralogs for SLAMF6P1 Gene

Variants for SLAMF6P1 Gene

Additional Variant Information for SLAMF6P1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
SLAMF6P1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for SLAMF6P1 Gene

Disorders for SLAMF6P1 Gene

No disorders were found for SLAMF6P1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for SLAMF6P1 Gene

Publications for SLAMF6P1 Gene

No publications were found for SLAMF6P1 Gene.

Products for SLAMF6P1 Gene

Sources for SLAMF6P1 Gene

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