Free for academic non-profit institutions. Other users need a Commercial license

Aliases for SLAMF6P1 Gene

Aliases for SLAMF6P1 Gene

  • SLAM Family Member 6 Pseudogene 1 2 3 5

External Ids for SLAMF6P1 Gene

Previous GeneCards Identifiers for SLAMF6P1 Gene

  • GC00U933467
  • GC01P162417

Summaries for SLAMF6P1 Gene

GeneCards Summary for SLAMF6P1 Gene

SLAMF6P1 (SLAM Family Member 6 Pseudogene 1) is a Pseudogene.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for SLAMF6P1 Gene

Genomics for SLAMF6P1 Gene

Regulatory Elements for SLAMF6P1 Gene

Enhancers for SLAMF6P1 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH01G162421 1 ENCODE 9.1 -23.7 -23689 1.4 HDGF PKNOX1 ATF1 ARNT ZNF2 TCF12 GATA2 NCOA1 REST MBD2 SPATA46 C1orf226 SLAMF6P1 UHMK1 LOC105373471
GH01G162418 1 ENCODE 8.7 -25.9 -25869 1.6 YY1 TCF12 GTF3C2 GATA2 JUNB NCOA1 SMARCB1 ZNF592 MBD2 SMARCA4 UHMK1 SPATA46 C1orf226 ATF6 SLAMF6P1 LOC105373471 SH2D1B
GH01G162404 0.6 ENCODE 9 -40.5 -40469 1.0 ATF2 ZNF316 EGR1 NFE2 FOS MAFK EMSY NFE2L2 SLAMF6P1 C1orf226 SH2D1B SPATA46
GH01G162423 0.7 ENCODE 6.3 -22.3 -22324 0.2 BCOR HDAC1 ESRRA ZNF766 ZNF316 ZNF584 SMARCE1 NR2F1 NRF1 DPF2 SPATA46 C1orf226 SLAMF6P1 LOC105373471
GH01G162411 0.7 ENCODE 6.1 -33.4 -33393 1.1 KLF1 CEBPG FOS ETV6 DEK ZNF687 ELF4 MNT KLF4 NR3C1 SPATA46 C1orf226 SLAMF6P1 SH2D1B LOC105373471
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around SLAMF6P1 on UCSC Golden Path with GeneCards custom track

Genomic Location for SLAMF6P1 Gene

Chromosome:
1
Start:
162,445,549 bp from pter
End:
162,446,566 bp from pter
Size:
1,018 bases
Orientation:
Plus strand

Genomic View for SLAMF6P1 Gene

Genes around SLAMF6P1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
SLAMF6P1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for SLAMF6P1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for SLAMF6P1 Gene

Proteins for SLAMF6P1 Gene

Post-translational modifications for SLAMF6P1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for SLAMF6P1 Gene

Domains & Families for SLAMF6P1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for SLAMF6P1 Gene

Function for SLAMF6P1 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for SLAMF6P1 Gene

Localization for SLAMF6P1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for SLAMF6P1 Gene

Pathways & Interactions for SLAMF6P1 Gene

SuperPathways for SLAMF6P1 Gene

No Data Available

Interacting Proteins for SLAMF6P1 Gene

Gene Ontology (GO) - Biological Process for SLAMF6P1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for SLAMF6P1 Gene

Drugs & Compounds for SLAMF6P1 Gene

No Compound Related Data Available

Transcripts for SLAMF6P1 Gene

mRNA/cDNA for SLAMF6P1 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for SLAMF6P1 Gene

No ASD Table

Relevant External Links for SLAMF6P1 Gene

GeneLoc Exon Structure for
SLAMF6P1
ECgene alternative splicing isoforms for
SLAMF6P1

Expression for SLAMF6P1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for SLAMF6P1 Gene

mRNA differential expression in normal tissues according to GTEx for SLAMF6P1 Gene

This gene is overexpressed in Colon - Transverse (x18.7), Small Intestine - Terminal Ileum (x11.0), Kidney - Cortex (x6.3), Esophagus - Mucosa (x5.6), Muscle - Skeletal (x4.4), and Vagina (x4.0).

NURSA nuclear receptor signaling pathways regulating expression of SLAMF6P1 Gene:

SLAMF6P1
genes like me logo Genes that share expression patterns with SLAMF6P1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for SLAMF6P1 Gene

Orthologs for SLAMF6P1 Gene

Evolution for SLAMF6P1 Gene

ENSEMBL:
Gene Tree for SLAMF6P1 (if available)
TreeFam:
Gene Tree for SLAMF6P1 (if available)

No data available for Orthologs for SLAMF6P1 Gene

Paralogs for SLAMF6P1 Gene

No data available for Paralogs for SLAMF6P1 Gene

Variants for SLAMF6P1 Gene

Relevant External Links for SLAMF6P1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
SLAMF6P1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for SLAMF6P1 Gene

Disorders for SLAMF6P1 Gene

No disorders were found for SLAMF6P1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for SLAMF6P1 Gene

Publications for SLAMF6P1 Gene

No publications were found for SLAMF6P1 Gene.

Products for SLAMF6P1 Gene

Sources for SLAMF6P1 Gene

Content
Loading form....