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Aliases for SKINT1L Gene

Aliases for SKINT1L Gene

  • Skint1 Like (Pseudogene) 2 3 5
  • Skint-Like, Pseudogene 3
  • SKINT1 3
  • SKINTL 3
  • SKINTP 3
  • BTN12 3

External Ids for SKINT1L Gene

Previous HGNC Symbols for SKINT1L Gene


Summaries for SKINT1L Gene

GeneCards Summary for SKINT1L Gene

SKINT1L (Skint1 Like (Pseudogene)) is a Pseudogene. Diseases associated with SKINT1L include Skint1-Like Pseudogene.

Additional gene information for SKINT1L Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for SKINT1L Gene

Genomics for SKINT1L Gene

GeneHancer (GH) Regulatory Elements for SKINT1L Gene

Promoters and enhancers for SKINT1L Gene
GeneHancer (GH) Identifier GH Type GH
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01I048221 Promoter/Enhancer 1.3 EPDnew ENCODE 11.9 -40.5 -40466 3.1 FOXA2 ARID4B DMAP1 ZNF48 ZSCAN9 RAD21 YY1 CREM MIXL1 KLF11 SLC5A9 ENSG00000272491 SKINT1L
GH01I048201 Enhancer 0.7 ENCODE 10.9 -19.7 -19705 1.2 CTCF MZF1 CEBPG RAD21 RFX5 TEAD3 SMC3 ZNF350 ZNF143 DEK PIR39007 ENSG00000272491 SKINT1L SLC5A9 ENSG00000223720
GH01I048493 Enhancer 0.9 Ensembl ENCODE 5.7 -311.9 -311949 2.6 TFAP4 FOXA2 MZF1 FEZF1 ZIC2 ZNF644 TEAD3 ZNF335 ZSCAN5C PRDM10 ENSG00000272491 SLC5A9 SKINT1L RPL21P25 SPATA6
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around SKINT1L on UCSC Golden Path with GeneCards custom track

Genomic Locations for SKINT1L Gene

Genomic Locations for SKINT1L Gene
86,337 bases
Minus strand

Genomic View for SKINT1L Gene

Genes around SKINT1L on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
SKINT1L Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for SKINT1L Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for SKINT1L Gene

Proteins for SKINT1L Gene

Post-translational modifications for SKINT1L Gene

No Post-translational modifications

No data available for DME Specific Peptides for SKINT1L Gene

Domains & Families for SKINT1L Gene

Gene Families for SKINT1L Gene

Suggested Antigen Peptide Sequences for SKINT1L Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with SKINT1L: view

No data available for Protein Domains and UniProtKB/Swiss-Prot for SKINT1L Gene

Function for SKINT1L Gene

Phenotypes for SKINT1L Gene

genes like me logo Genes that share phenotypes with SKINT1L: view

Animal Model Products

Inhibitory RNA Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for SKINT1L Gene

Localization for SKINT1L Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for SKINT1L Gene

Pathways & Interactions for SKINT1L Gene

SuperPathways for SKINT1L Gene

No Data Available

Interacting Proteins for SKINT1L Gene

Gene Ontology (GO) - Biological Process for SKINT1L Gene


No data available for Pathways by source and SIGNOR curated interactions for SKINT1L Gene

Drugs & Compounds for SKINT1L Gene

No Compound Related Data Available

Transcripts for SKINT1L Gene

mRNA/cDNA for SKINT1L Gene

(4) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Inhibitory RNA Products

Alternative Splicing Database (ASD) splice patterns (SP) for SKINT1L Gene

No ASD Table

Relevant External Links for SKINT1L Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for SKINT1L Gene

NURSA nuclear receptor signaling pathways regulating expression of SKINT1L Gene:

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for SKINT1L Gene

Orthologs for SKINT1L Gene

Evolution for SKINT1L Gene

Gene Tree for SKINT1L (if available)
Gene Tree for SKINT1L (if available)

No data available for Orthologs for SKINT1L Gene

Paralogs for SKINT1L Gene

No data available for Paralogs for SKINT1L Gene

Variants for SKINT1L Gene

Sequence variations from dbSNP and Humsavar for SKINT1L Gene

SNP ID Clin Chr 01 pos Variation AA Info Type
rs1000045838 -- 48,147,104(-) ACAAC/ACAACAAC intron_variant
rs1000095314 -- 48,106,776(-) G/C/T intron_variant
rs1000106274 -- 48,103,839(-) G/A intron_variant
rs1000172335 -- 48,173,868(-) T/C intron_variant
rs1000240569 -- 48,168,154(-) C/A intron_variant

Structural Variations from Database of Genomic Variants (DGV) for SKINT1L Gene

Variant ID Type Subtype PubMed ID
esv3893523 CNV loss 25118596
nsv1152954 CNV duplication 26484159

Additional Variant Information for SKINT1L Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for SKINT1L Gene

Disorders for SKINT1L Gene

MalaCards: The human disease database

(1) MalaCards diseases for SKINT1L Gene - From: OMIM and GeneCards

Disorder Aliases PubMed IDs
skint1-like pseudogene
  • skintl
- elite association - COSMIC cancer census association via MalaCards
genes like me logo Genes that share disorders with SKINT1L: view

No data available for UniProtKB/Swiss-Prot and Genatlas for SKINT1L Gene

Publications for SKINT1L Gene

  1. The SKINT1-like gene is inactivated in hominoids but not in all primate species: implications for the origin of dendritic epidermal T cells. (PMID: 25830554) Mohamed RH … Kasahara M (PloS one 2015) 2 3 58
  2. Skint1, the prototype of a newly identified immunoglobulin superfamily gene cluster, positively selects epidermal gammadelta T cells. (PMID: 18408721) Boyden LM … Lifton RP (Nature genetics 2008) 2 3 58
  3. The DNA sequence and biological annotation of human chromosome 1. (PMID: 16710414) Gregory SG … Prigmore E (Nature 2006) 3 58

Products for SKINT1L Gene

Sources for SKINT1L Gene

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