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Aliases for SKINT1L Gene

Aliases for SKINT1L Gene

  • Skint1 Like (Pseudogene) 2 3
  • Skint-Like, Pseudogene 3 5
  • SKINTL 3 5
  • SKINT1 3
  • SKINTP 3
  • BTN12 3

External Ids for SKINT1L Gene

Previous HGNC Symbols for SKINT1L Gene

  • SKINTP
  • SKINTL

Summaries for SKINT1L Gene

GeneCards Summary for SKINT1L Gene

SKINT1L (Skint1 Like (Pseudogene)) is a Pseudogene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for SKINT1L Gene

Genomics for SKINT1L Gene

Genomic Location for SKINT1L Gene

Chromosome:
1
Start:
48,096,092 bp from pter
End:
48,182,428 bp from pter
Size:
86,337 bases
Orientation:
Minus strand

Genomic View for SKINT1L Gene

Genes around SKINT1L on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
SKINT1L Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for SKINT1L Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for SKINT1L Gene

No data available for Regulatory Elements for SKINT1L Gene

Proteins for SKINT1L Gene

Post-translational modifications for SKINT1L Gene

No Post-translational modifications

No data available for DME Specific Peptides for SKINT1L Gene

Domains & Families for SKINT1L Gene

Gene Families for SKINT1L Gene

Suggested Antigen Peptide Sequences for SKINT1L Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with SKINT1L: view

No data available for Protein Domains and UniProtKB/Swiss-Prot for SKINT1L Gene

Function for SKINT1L Gene

Phenotypes for SKINT1L Gene

genes like me logo Genes that share phenotypes with SKINT1L: view

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for SKINT1L Gene

Localization for SKINT1L Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for SKINT1L Gene

Pathways & Interactions for SKINT1L Gene

SuperPathways for SKINT1L Gene

No Data Available

Interacting Proteins for SKINT1L Gene

Gene Ontology (GO) - Biological Process for SKINT1L Gene

None

No data available for Pathways by source and SIGNOR curated interactions for SKINT1L Gene

Drugs & Compounds for SKINT1L Gene

No Compound Related Data Available

Transcripts for SKINT1L Gene

mRNA/cDNA for SKINT1L Gene

(4) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for SKINT1L Gene

No ASD Table

Relevant External Links for SKINT1L Gene

GeneLoc Exon Structure for
SKINT1L
ECgene alternative splicing isoforms for
SKINT1L

Expression for SKINT1L Gene

No Expression Related Data Available

In Situ Assay Products

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , mRNA Expression by UniProt/SwissProt and Protein tissue co-expression partners for SKINT1L Gene

Orthologs for SKINT1L Gene

Evolution for SKINT1L Gene

ENSEMBL:
Gene Tree for SKINT1L (if available)
TreeFam:
Gene Tree for SKINT1L (if available)

No data available for Orthologs for SKINT1L Gene

Paralogs for SKINT1L Gene

No data available for Paralogs for SKINT1L Gene

Variants for SKINT1L Gene

Sequence variations from dbSNP and Humsavar for SKINT1L Gene

SNP ID Clin Chr 01 pos Sequence Context AA Info Type
rs127723 -- 48,165,993(-) CTACA(A/G)TCTAT intron-variant
rs214190 -- 48,170,114(-) ataaa(C/T)cagaa intron-variant
rs214191 -- 48,169,491(-) caaaa(C/T)aataa intron-variant
rs214212 -- 48,166,246(-) TTTAC(A/G)TCTAC intron-variant
rs214213 -- 48,165,507(-) TCATT(A/C)TTTCT intron-variant

Relevant External Links for SKINT1L Gene

HapMap Linkage Disequilibrium report
SKINT1L

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for SKINT1L Gene

Disorders for SKINT1L Gene

Relevant External Links for SKINT1L

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
SKINT1L
Atlas of Genetics and Cytogenetics in Oncology and Haematology:
SKINT1L

No disorders were found for SKINT1L Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for SKINT1L Gene

Publications for SKINT1L Gene

  1. Skint1, the prototype of a newly identified immunoglobulin superfamily gene cluster, positively selects epidermal gammadelta T cells. (PMID: 18408721) Boyden L.M. … Lifton R.P. (Nat. Genet. 2008) 2 3
  2. The DNA sequence and biological annotation of human chromosome 1. (PMID: 16710414) Gregory S.G. … Bentley D.R. (Nature 2006) 3

Products for SKINT1L Gene

Sources for SKINT1L Gene

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