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Aliases for SIRPB3P Gene

Aliases for SIRPB3P Gene

  • Signal Regulatory Protein Beta 3, Pseudogene 2 3 5
  • Signal-Regulatory Protein Beta 3, Pseudogene 2

External Ids for SIRPB3P Gene

Summaries for SIRPB3P Gene

GeneCards Summary for SIRPB3P Gene

SIRPB3P (Signal Regulatory Protein Beta 3, Pseudogene) is a Pseudogene.

Additional gene information for SIRPB3P Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for SIRPB3P Gene

Genomics for SIRPB3P Gene

GeneHancer (GH) Regulatory Elements for SIRPB3P Gene

Promoters and enhancers for SIRPB3P Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH20I001708 Enhancer 0.6 ENCODE 550.8 -0.1 -71 0.5 MTA2 TEAD4 TAL1 CBFA2T3 TCF12 CTBP1 KLF16 NCOR1 CBFA2T2 SIRPB3P SIRPG SIRPB1 LOC105369219
GH20I001764 Enhancer 0.9 Ensembl ENCODE 5.7 -56.5 -56500 0.6 SMARCA5 CTCF ZNF654 HLF ARID4B MAX RAD21 TGIF2 MBD1 ZNF143 SIRPG SIRPB3P LOC100533711 LOC100289473
GH20I001663 Enhancer 1.1 Ensembl ENCODE dbSUPER 0.3 +42.9 42922 2.8 ZNF687 ZNF189 CBFB MAX EBF1 MNT ELF1 DPF2 ATF2 SP1 RN7SL561P ENSG00000271523 SIRPB1 SIRPG SIRPG-AS1 SIRPB3P
GH20I001722 Enhancer 0.7 ENCODE 0.4 -14.2 -14220 0.2 PKNOX1 USF1 MAX EBF1 BATF IRF4 ZNF664 NFATC1 IKZF2 RUNX3 SIRPB1 LOC105369219 SIRPB3P
GH20I001671 Enhancer 0.7 ENCODE dbSUPER 0.3 +34.6 34582 3.4 NR2F1 IKZF1 RUNX3 EZH2 ENSG00000271523 ENSG00000236550 RN7SL561P SIRPG SIRPB3P
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around SIRPB3P on UCSC Golden Path with GeneCards custom track

Genomic Locations for SIRPB3P Gene

Genomic Locations for SIRPB3P Gene
chr20:1,665,283-1,708,200
(GRCh38/hg38)
Size:
42,918 bases
Orientation:
Minus strand
chr20:1,645,929-1,716,616
(GRCh37/hg19)

Genomic View for SIRPB3P Gene

Genes around SIRPB3P on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
SIRPB3P Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for SIRPB3P Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for SIRPB3P Gene

Proteins for SIRPB3P Gene

Post-translational modifications for SIRPB3P Gene

No Post-translational modifications

No data available for DME Specific Peptides for SIRPB3P Gene

Domains & Families for SIRPB3P Gene

Gene Families for SIRPB3P Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with SIRPB3P: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for SIRPB3P Gene

Function for SIRPB3P Gene

Phenotypes From GWAS Catalog for SIRPB3P Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for SIRPB3P Gene

Localization for SIRPB3P Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for SIRPB3P Gene

Pathways & Interactions for SIRPB3P Gene

SuperPathways for SIRPB3P Gene

No Data Available

Interacting Proteins for SIRPB3P Gene

Gene Ontology (GO) - Biological Process for SIRPB3P Gene

None

No data available for Pathways by source and SIGNOR curated interactions for SIRPB3P Gene

Drugs & Compounds for SIRPB3P Gene

No Compound Related Data Available

Transcripts for SIRPB3P Gene

mRNA/cDNA for SIRPB3P Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for SIRPB3P Gene

No ASD Table

Relevant External Links for SIRPB3P Gene

GeneLoc Exon Structure for
SIRPB3P
ECgene alternative splicing isoforms for
SIRPB3P

Expression for SIRPB3P Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for SIRPB3P Gene

mRNA differential expression in normal tissues according to GTEx for SIRPB3P Gene

This gene is overexpressed in Whole Blood (x8.9), Brain - Nucleus accumbens (basal ganglia) (x4.6), and Brain - Caudate (basal ganglia) (x4.4).

NURSA nuclear receptor signaling pathways regulating expression of SIRPB3P Gene:

SIRPB3P
genes like me logo Genes that share expression patterns with SIRPB3P: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for SIRPB3P Gene

Orthologs for SIRPB3P Gene

Evolution for SIRPB3P Gene

ENSEMBL:
Gene Tree for SIRPB3P (if available)
TreeFam:
Gene Tree for SIRPB3P (if available)

No data available for Orthologs for SIRPB3P Gene

Paralogs for SIRPB3P Gene

No data available for Paralogs for SIRPB3P Gene

Variants for SIRPB3P Gene

Additional Variant Information for SIRPB3P Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
SIRPB3P

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for SIRPB3P Gene

Disorders for SIRPB3P Gene

No disorders were found for SIRPB3P Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for SIRPB3P Gene

Publications for SIRPB3P Gene

  1. Signal regulatory proteins in the immune system. (PMID: 16339510) van Beek EM … van den Berg TK (Journal of immunology (Baltimore, Md. : 1950) 2005) 2 3 58
  2. A nomenclature for signal regulatory protein family members. (PMID: 16339511) van den Berg TK … Barclay AN (Journal of immunology (Baltimore, Md. : 1950) 2005) 2 3 58

Products for SIRPB3P Gene

Sources for SIRPB3P Gene

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