SIRPB1 Gene
protein-coding GIFtS : 55
GCID: GC20 M001544
signal-regulatory protein beta 1
Jump to Section...
Aliases
Databases
Disorders / Diseases
Domains / Families
Drugs / Compounds
Expression
Function
Genomic Views
Intellectual Property
Orthologs
Paralogs
Pathways / Interactions
Products
Proteins
Publications
Search Box
Summaries
Transcripts
Variants
TOP
BOTTOM
Aliasesfor SIRPB1 gene
(According to
1 HGNC ,
2 Entrez Gene ,
3 UniProtKB/Swiss-Prot ,
4 UniProtKB/TrEMBL , 5 OMIM , 6 GeneLoc ,
7 Ensembl ,
8 DME ,
9 miRBase ,
and/or 10 fRNAdb )About This Section Aliases Signal-Regulatory Protein Beta 1 1 2 Signal-Regulatory Protein Beta-12 CD172b1 2 SIRP-Beta-11 SIRP-BETA-11 2 CD172b Antigen3 CD172 Antigen-Like Family Member B2 3 SIRP-Beta-1 Isoform 33
Export aliases for SIRPB1 gene to outside databases Previous GC identifers: GC20M001531 GC20M001538 GC20M001491 GC20M001495
Jump to Section...
Aliases
Databases
Disorders / Diseases
Domains / Families
Drugs / Compounds
Expression
Function
Genomic Views
Intellectual Property
Orthologs
Paralogs
Pathways / Interactions
Products
Proteins
Publications
Search Box
Summaries
Transcripts
Variants
TOP
BOTTOM
Summariesfor SIRPB1 gene (According to Entrez Gene ,
Tocris Bioscience ,
Wikipedia's
Gene Wiki ,
PharmGKB ,
UniProtKB/Swiss-Prot ,
and/or
UniProtKB/TrEMBL )
About This Section Entrez Gene summary for SIRPB1 : The protein encoded by this gene is a member of the signal-regulatory-protein (SIRP) family, and also belongs to the immunoglobulin superfamily. SIRP family members are receptor-type transmembrane glycoproteins known to be involved in the negative regulation of receptor tyrosine kinase-coupled signaling processes. This protein was found to interact with TYROBP/DAP12, a protein bearing immunoreceptor tyrosine-based activation motifs. This protein was also reported to participate in the recruitment of tyrosine kinase SYK. Multiple transcript variants encoding different isoforms have been found for this gene. (provided by RefSeq, Feb 2009) UniProtKB/Swiss-Prot: SIRBL_HUMAN, Q5TFQ8 Function : Immunoglobulin-like cell surface receptor involved in the negative regulation of receptor tyrosinekinase-coupled signaling processes (By similarity) Gene Wiki entry for SIRPB1
Jump to Section...
Aliases
Databases
Disorders / Diseases
Domains / Families
Drugs / Compounds
Expression
Function
Genomic Views
Intellectual Property
Orthologs
Paralogs
Pathways / Interactions
Products
Proteins
Publications
Search Box
Summaries
Transcripts
Variants
TOP
BOTTOM
Genomic Viewsfor SIRPB1 gene
(According to
GeneLoc and/or
HGNC , and/or
Entrez Gene (NCBI build 37) ,
and/or miRBase ,
Genomic Views according to
UCSC (hg19) and
Ensembl (release 69) ,
Regulatory elements and Epigenetics data according to
QIAGEN ,
SABiosciences , and/or
SwitchGear Genomics )About This Section RefSeq DNA sequence: NC_000020.10 NC_018931.1 NT_011387.8 Regulatory elements: SABiosciences Regulatory transcription factor binding sites in the SIRPB1 gene promoter: HTF SREBP-1c Pax-6 NF-E2 p45 SREBP-1b AREB6 Max SREBP-1a HOXA5 c-Myc Other transcription factors Search SABiosciences Chromatin IP Primers for SIRPB1 Epigenetics: QIAGEN PyroMark CpG Assay predesigned Pyrosequencing DNA Methylation assays in human, mouse, rat SIRPB1
Genomic Location: Genomic View : UCSC Golden Path with GeneCards custom track Entrez Gene cytogenetic band: 20p13 Ensembl cytogenetic band: 20p13 HGNC cytogenetic band: 20p13 SIRPB1 Gene in genomic location: bands according to Ensembl, locations according to
(and/or Entrez Gene and/or Ensembl if different) GeneLoc information about chromosome 20 GeneLoc Exon Structure
GeneLoc location for GC20M001544: view genomic region
(about GC identifiers )
Start:
1,544,167 bp from pter
End:
1,600,707 bp from pter
Size:
56,541 bases
Orientation:
minus strand
Jump to Section...
Aliases
Databases
Disorders / Diseases
Domains / Families
Drugs / Compounds
Expression
Function
Genomic Views
Intellectual Property
Orthologs
Paralogs
Pathways / Interactions
Products
Proteins
Publications
Search Box
Summaries
Transcripts
Variants
TOP
BOTTOM
Proteinsfor SIRPB1 gene
(According to
1 UniProtKB ,
HORDE ,
neXtProt ,
Ensembl ,
and/or Reactome ,
Modification sites according to 2 PhosphoSitePlus ,
Specific Peptides from DME ,
Protein expression images according to data from SPIRE MOPED and PaxDb ,
RefSeq according to NCBI ,
PDB rendering according to OCA and/or Proteopedia ,
Recombinant Proteins
from
EMD Millipore ,
R&D Systems ,
GenScript ,
Enzo Life Sciences ,
OriGene ,
Novus Biologicals ,
Sino Biological ,
ProSpec , and/or
Uscn ,
Biochemical Assays by
EMD Millipore ,
R&D Systems ,
OriGene ,
GenScript ,
Cell Signaling Technology ,
Enzo Life Sciences , and/or
Uscn ,
Ontologies according to Gene
Ontology Consortium 01 Mar 2013 and
Entrez Gene ,
Antibodies by
EMD Millipore ,
R&D Systems ,
GenScript ,
Cell Signaling Technology ,
OriGene ,
Novus Biologicals ,
Thermo Fisher Scientific ,
Abcam , and/or
Uscn )
About This Section UniProtKB/Swiss-Prot: SIRB1_HUMAN, O00241 (See
protein sequence )Recommended Name: Signal-regulatory protein beta-1 precursor Size : 398 amino acids; 43211 Da
Subunit : Homodimer; disulfide-linked. Interacts with TYROBP. This interaction results in the recruitment of SYK
Subcellular location : Membrane; Single-pass type I membrane protein
2 PDB 3D structures from and Proteopedia for SIRPB1 :2D9C (3D)
  2JJU (3D)
 
Secondary accessions : A6NLM2 B2R8V0 Q5TFQ9 Q5TFR0 Q8TB12 Q9H1U5 Q9Y4V0Alternative splicing : 3 isoforms : O00241-1 O00241-2 Q5TFQ8-1 (No experimental confirmation available)UniProtKB/Swiss-Prot: SIRBL_HUMAN, Q5TFQ8 (See
protein sequence )
Recommended Name: Signal-regulatory protein beta-1 isoform 3 precursor Size : 398 amino acids; 43359 Da
Subcellular location : Membrane; Single-pass type I membrane protein
1 PDB 3D structure from and Proteopedia for SIRPB1 :2JJV (3D)
 
Secondary accessions : Q7Z3B9Alternative splicing : 3 isoforms : Q5TFQ8-1 O00241-1 O00241-2 (No experimental confirmation available)Explore the universe of human proteins at neXtProt for SIRPB1: NX_Q5TFQ8 Post-translational modifications:
N-glycosylated1
View modification sites using PhosphoSitePlus 2 View neXtProt modification sites for NX_Q5TFQ8 SIRPB1 Protein expression data from MOPED and PaxDb : About this image REFSEQ proteins (3 alternative transcripts):
NP_001077379.1 NP_006056.2 NP_001129316.1 ENSEMBL proteins: ENSP00000371018 ENSP00000371016 ENSP00000457323 ENSP00000456351 ENSP00000457829 ENSP00000456519 ENSP00000457458 ENSP00000457855 ENSP00000456747 ENSP00000455568 ENSP00000279477 ENSP00000456826 ENSP00000262929 Reactome Protein details: O00241 Human Recombinant Protein Products for SIRPB1: Gene Ontology (GO): 3 cellular component terms (GO ID links to tree view) : About this table
SIRPB1 for ontologies About GeneDecksing SIRPB1 Antibody Products: Assay Products for SIRPB1:
Jump to Section...
Aliases
Databases
Disorders / Diseases
Domains / Families
Drugs / Compounds
Expression
Function
Genomic Views
Intellectual Property
Orthologs
Paralogs
Pathways / Interactions
Products
Proteins
Publications
Search Box
Summaries
Transcripts
Variants
TOP
BOTTOM
Protein
Domains / Familiesfor SIRPB1 gene (According to InterPro , ProtoNet ,
UniProtKB , and/or BLOCKS ,
Sets of similar genes according to GeneDecks )
About This Section
SIRPB1 for domains About GeneDecksing 5 InterPro domains/families :
Graphical View of Domain Structure for InterPro Entry O00241 Graphical View of Domain Structure for InterPro Entry Q5TFQ8 ProtoNet protein and cluster: O00241
2 Blocks protein families : IPB003597 Immunoglobulin C-type IPB013106 Immunoglobulin V-set UniProtKB/Swiss-Prot: SIRB1_HUMAN, O00241 Similarity : Contains 2 Ig-like C1-type (immunoglobulin-like) domainsSimilarity : Contains 1 Ig-like V-type (immunoglobulin-like) domain
UniProtKB/Swiss-Prot: SIRBL_HUMAN, Q5TFQ8 Similarity : Contains 2 Ig-like C1-type (immunoglobulin-like) domainsSimilarity : Contains 1 Ig-like V-type (immunoglobulin-like) domain
Jump to Section...
Aliases
Databases
Disorders / Diseases
Domains / Families
Drugs / Compounds
Expression
Function
Genomic Views
Intellectual Property
Orthologs
Paralogs
Pathways / Interactions
Products
Proteins
Publications
Search Box
Summaries
Transcripts
Variants
TOP
BOTTOM
Functionfor SIRPB1 gene
(According to 1 UniProtKB ,
Genatlas ,
LifeMap Discovery™ ,
IUBMB , and/or
2 DME ,
Human phenotypes from GenomeRNAi ,
Animal models from MGI Mar 06 2013,
inGenious Targeting Laboratory ,
bound targets from SABiosciences ,
miRNA Gene Targets from miRTarBase ,
shRNA from
OriGene ,
Sirion Biotech ,
RNAi from
EMD Millipore ,
siRNAs from
OriGene ,
QIAGEN ,
microRNA from QIAGEN ,
Gene Editing from DNA2.0 ,
Sirion Biotech ,
Clones from EMD Millipore ,
OriGene ,
SwitchGear Genomics ,
GenScript ,
Sino Biological ,
DNA2.0 ,
and Vector BioLabs ,
Cell Lines from GenScript ,
LifeMap BioReagents ,
Sirion Biotech ,
In Situ Hybridization Assays from Advanced Cell Diagnostics ,
Ontologies according to Gene Ontology Consortium 01 Mar 2013 via
Entrez Gene .)
About This Section Molecular Function: UniProtKB/Swiss-Prot Summary: SIRB1_HUMAN, O00241 Function : Immunoglobulin-like cell surface receptor involved in the negative regulation of receptor tyrosinekinase-coupled signaling processes. Participates also in the recruitment of tyrosine kinase SYK UniProtKB/Swiss-Prot: SIRBL_HUMAN, Q5TFQ8 Function : Immunoglobulin-like cell surface receptor involved in the negative regulation of receptor tyrosinekinase-coupled signaling processes (By similarity)
Gene Ontology (GO): 1 molecular function term (GO ID links to tree view) : About this table
SIRPB1 for ontologies About GeneDecksing Phenotypes: 1 GenomeRNAi human phenotype for SIRPB1 :Animal Models: Clone Products: Browse Clones for the Expression of Recombinant Proteins Available from EMD Millipore OriGene Myc/DDK tagged cDNA clones in CMV expression vector in human , mouse , rat for SIRPB1 (see all 4 ) OriGene untagged cDNA clones in CMV expression vector in human , mouse , rat for SIRPB1 (see all 3 )OriGene custom cloning services - gene synthesis, subcloning, mutagenesis,
variant library, vector shuttling GenScript: all cDNA clones in your preferred vector (see all 3 ): SIRPB1 (NM_001083910 ) Browse Sino Biological Human cDNA Clones DNA2.0 Custom Codon Optimized Gene
Synthesis Service for SIRPB1 Vector BioLabs ready-to-use adenovirus/AAV for human , mouse , rat SIRPB1
In Situ Assay Products: Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for SIRPB1
Jump to Section...
Aliases
Databases
Disorders / Diseases
Domains / Families
Drugs / Compounds
Expression
Function
Genomic Views
Intellectual Property
Orthologs
Paralogs
Pathways / Interactions
Products
Proteins
Publications
Search Box
Summaries
Transcripts
Variants
TOP
BOTTOM
Pathways & Interactionsfor SIRPB1 gene
(Pathways according to
EMD Millipore ,
R&D Systems ,
Cell Signaling Technology ,
KEGG ,
PharmGKB ,
BioSystems ,
Reactome ,
Tocris Bioscience ,
GeneGo (Thomson Reuters) ,
QIAGEN ,
and/or UniProtKB ,
Sets of similar genes according to GeneDecks ,
Interaction Networks according to
SABiosciences ,
and/or STRING ,
Interactions according to 1 UniProtKB ,
2 MINT ,
3 I2D , and/or
4 STRING ,
with links to IntAct and
Ensembl ,
Ontologies according to Gene Ontology Consortium 01 Mar 2013 via
Entrez Gene) .
About This Section Unified GeneCards pathways   About this table See pathways by source Super-pathway contained gene-specific pathways 1 Immune System 2 Osteoclast differentiation 3 Signal regulatory protein (SIRP) family interactions 4 Signaling by FGFR 5 Cell-cell junction organization
Pathway sources See GeneCards unified pathways Show all pathways 5
Reactome Pathways for SIRPB1 1
Kegg Pathway (Kegg details for SIRPB1) :
SIRPB1 for pathways About GeneDecksing Interactions: SABiosciences Gene Network CentralTM Interacting Genes and Proteins Network for SIRPB1 STRING Interaction
Network Preview (showing 5 interactants - click image to see 8)5/9 Interacting proteins for SIRPB1 (O00241 1 Q5TFQ8 1 , 3 ENSP00000279477 4 ) via UniProtKB, MINT, STRING , and/or I2D (see all 9 )About this table Gene Ontology (GO): 2 biological process terms (GO ID links to tree view) : About this table
SIRPB1 for ontologies About GeneDecksing
Jump to Section...
Aliases
Databases
Disorders / Diseases
Domains / Families
Drugs / Compounds
Expression
Function
Genomic Views
Intellectual Property
Orthologs
Paralogs
Pathways / Interactions
Products
Proteins
Publications
Search Box
Summaries
Transcripts
Variants
TOP
BOTTOM
Drugs & Compoundsfor SIRPB1 gene (Chemical Compounds according to UniProtKB , Enzo Life Sciences ,
EMD Millipore , Tocris Bioscience
HMDB ,
BitterDB , and/or
Novoseek , and Drugs according to
DrugBank ,
Enzo Life Sciences , and/or
PharmGKB , with drugs/clinical trials/news
search links to CenterWatch )
About This Section Browse Tocris compounds for SIRPB1 Search CenterWatch for drugs/clinical trials and news about SIRPB1 / SIRBL
Jump to Section...
Aliases
Databases
Disorders / Diseases
Domains / Families
Drugs / Compounds
Expression
Function
Genomic Views
Intellectual Property
Orthologs
Paralogs
Pathways / Interactions
Products
Proteins
Publications
Search Box
Summaries
Transcripts
Variants
TOP
BOTTOM
Transcriptsfor SIRPB1 gene (Secondary structures according to
fRNAdb ,
GenBank/EMBL/DDBJ Accessions according to
Unigene
(Build 235 Homo sapiens; Mar 10 2013) or GenBank , RefSeq according to Entrez Gene ,
DOTS (version 10), and/or
AceView ,
transcript ids from Ensembl
with links to UCSC ,
exon structure from GeneLoc ,
alternative splicing isoforms according to ASD and/or
ECgene ,
RNAi Products from
EMD Millipore ,
siRNAs from
OriGene ,
QIAGEN ,
shRNA from
OriGene ,
Sirion Biotech ,
microRNA from QIAGEN ,
Tagged/untagged cDNA clones from
OriGene ,
SwitchGear Genomics ,
GenScript ,
DNA2.0 ,
Vector BioLabs ,
Primers from
OriGene ,
SABiosciences , and/or
QIAGEN
)About This Section REFSEQ mRNAs for SIRPB1 gene (3 alternative transcripts): NM_001083910.2 NM_006065.3 NM_001135844.2 Unigene Cluster for SIRPB1:
Signal-regulatory protein beta 1 Hs.664861 [show with all ESTs ] Unigene Representative Sequence: Y10376 15 Ensembl transcripts including schematic representations, and UCSC links where relevant : ENST00000381605 (uc010gai.3 uc002wfk.4 ) ENST00000381603 ENST00000569629 ENST00000563840 ENST00000565076 ENST00000565775 ENST00000569387 ENST00000566055 ENST00000565087 ENST00000565230 ENST00000562014 ENST00000279477 (uc002wfl.4 )ENST00000568365 ENST00000381596 ENST00000262929 Clone Products: OriGene Myc/DDK tagged cDNA clones in CMV expression vector in human , mouse , rat for SIRPB1 (see all 4 ) OriGene untagged cDNA clones in CMV expression vector in human , mouse , rat for SIRPB1 (see all 3 )OriGene custom cloning services - gene synthesis, subcloning, mutagenesis,
variant library, vector shuttling GenScript: all cDNA clones in your preferred vector (see all 3 ): SIRPB1 (NM_001083910 ) DNA2.0 Custom Codon Optimized Gene
Synthesis Service for SIRPB1 Vector BioLabs ready-to-use adenovirus/AAV for human , mouse , rat SIRPB1
Additional cDNA sequence: AK130124.1 AK289866.1 AK313517.1 BC025286.1 BC075835.1 BC131747.1 BX537992.1 Y10376.1
11 DOTS entries : DT.91728990 DT.95153159
DT.95349255 DT.448770 DT.100694210 DT.100038563 DT.91728993 DT.120838642 DT.99927024 DT.100651082 DT.120813916 24/67 AceView cDNA sequences (see all 67 ):
BM285386 BI756472 AK130124 AA709221 BQ635330 CD369292 CA748838 AL597487 BQ635329 BQ635331 AI088704 CD742880 BX537992 BI826712 BC025286 AA315922 CA306410 AX747909 BI518525 BQ027400 BI909139 BI823904 BI908893 BX112477 GeneLoc Exon Structure 5/8 Alternative Splicing Database (ASD) splice patterns (SP) for SIRPB1 (see all 8 ) About this scheme ExUns: 1a · 1b · 1c ^ 2 ^ 3 ^ 4a · 4b · 4c · 4d ^ 5 ^ 6 ^ 7 ^ 8 ^ 9a · 9b ^ 10 SP1 :       -   -   -   -   -   -   -     -   -         SP2 :                                 SP3 :           -                       SP4 :           -   -                     SP5 :           -   -   -                  
ECgene alternative splicing isoforms for SIRPB1
Jump to Section...
Aliases
Databases
Disorders / Diseases
Domains / Families
Drugs / Compounds
Expression
Function
Genomic Views
Intellectual Property
Orthologs
Paralogs
Pathways / Interactions
Products
Proteins
Publications
Search Box
Summaries
Transcripts
Variants
TOP
BOTTOM
Expression for SIRPB1 gene
(RNA expression data according to
H-InvDB ,
NONCODE ,
miRBase , and
RNAdb ,
Expression images according to data from
BioGPS ,
Illumina Human BodyMap , and
CGAP
SAGE ,
Sets of similar genes according to GeneDecks ,
in vivo and in vitro expression data from LifeMap Discovery™ ,
plus additional links to
Genevestigator , and/or
SOURCE , and/or
BioGPS , and/or
UniProtKB ,
PCR Arrays from
SABiosciences ,
Primers from
OriGene ,
SABiosciences , and/or
QIAGEN ,
In Situ Hybridization Assays from Advanced Cell Diagnostics )
About This Section SIRPB1 expression in normal human tissues (normalized intensities) See probesets specificity/sensitivity at GeneAnnot About this image BioGPS CGAP TAG: -- About this image SIRPB1 expression in embryonic tissues and stem cells Expression by the Database of Embryonic development, Stem cell research, and
Regenerative medicine About this table
See SIRPB1 Protein Expression from SPIRE MOPED and PaxDB Genevestigator expression for SIRPB1 SOURCE GeneReport for Unigene cluster: Hs.664861 UniProtKB/Swiss-Prot: SIRB1_HUMAN, O00241 Tissue specificity : Detected in monocytes and dendritic cells SABiosciences Custom PCR Arrays for SIRPB1 Primer Products: OriGene genome-wide validated SYBR primer pairs in human , mouse , rat for SIRPB1Browse OriGene validated miRNA SYBR primer pairs SABiosciences RT2 qPCR Primer Assay in human , mouse , rat SIRPB1 QIAGEN QuantiTect SYBR Green Assays in human , mouse , rat SIRPB1 QIAGEN QuantiFast Probe-based Assays in human , mouse , rat SIRPB1 In Situ Assay Products: Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for SIRPB1
Jump to Section...
Aliases
Databases
Disorders / Diseases
Domains / Families
Drugs / Compounds
Expression
Function
Genomic Views
Intellectual Property
Orthologs
Paralogs
Pathways / Interactions
Products
Proteins
Publications
Search Box
Summaries
Transcripts
Variants
TOP
BOTTOM
Orthologsfor SIRPB1 gene
(Orthologs according to
1,2 HomoloGene (2 older version, for species not in 1 newer version),
3 euGenes ,
4 SGD
,
5 MGI Mar 06 2013,
with possible further links to
Flybase
and/or
WormBase ,
and/or
6 Ensembl pan taxonomic compara ,
Gene Trees according to Ensembl and
TreeFam )
About This Section
This gene was present in the common ancestor of chordates.
Orthologs for SIRPB1 gene from 2/7 species (see all 7 ) About this table
ENSEMBL Gene Tree for SIRPB1 (if available)TreeFam Gene Tree for SIRPB1 (if available)
Jump to Section...
Aliases
Databases
Disorders / Diseases
Domains / Families
Drugs / Compounds
Expression
Function
Genomic Views
Intellectual Property
Orthologs
Paralogs
Pathways / Interactions
Products
Proteins
Publications
Search Box
Summaries
Transcripts
Variants
TOP
BOTTOM
Paralogsfor SIRPB1 gene (Paralogs according to
1 HomoloGene , 2 Ensembl , and 3 SIMAP , Pseudogenes according to 4 Pseudogene.org Build 68)About This Section Paralogs for SIRPB1 gene SIRPB2 2 SIRPD 2 ENSG00000260861 2 SIRPA 2 SIRPG 2 18/23 SIMAP similar genes for SIRPB1 using alignment to 11 protein entries: SIRB1_HUMAN (see all proteins )
(see all similar genes ):PTPNS1 SIRPA SIRPG HLA-DRB5 HLA DRB4 HLA-DRB4*0102 MICA SIRPD HLA-DQB HLA-A HLA HLA-A*0201V3 HLA-B HLA-DRB4 HLA-C SIRPB2 HLA-DRB1 HFE
SIRPB1 for paralogs About GeneDecksing 5/6 Pseudogenes.org Pseudogenes for SIRPB1 (see all 6 )PGOHUM00000262174 PGOHUM00000262176 PGOHUM00000262177 PGOHUM00000247422 PGOHUM00000247423
Jump to Section...
Aliases
Databases
Disorders / Diseases
Domains / Families
Drugs / Compounds
Expression
Function
Genomic Views
Intellectual Property
Orthologs
Paralogs
Pathways / Interactions
Products
Proteins
Publications
Search Box
Summaries
Transcripts
Variants
TOP
BOTTOM
Genomic Variantsfor SIRPB1 gene (SNPs/Variants according to the
1 NCBI SNP Database ,
2 Ensembl ,
3 PupaSUITE ,
UniProtKB , and
DNA2.0 ,
Linkage Disequilibrium by HapMap ,
Structural Variations(CNVs/InDels/Inversions) from the Database of Genomic Variants , Mutations from the Human Gene
Mutation Database (HGMD) and the Locus Specific Mutation
Databases (LSDB) , Blood group antigen gene mutations by BGMUT ,
Resequencing Primers from QIAGEN ,
Cancer Mutation PCR Arrays and Assays and Copy Number PCR Arrays from SABiosciences )
About This Section
Genomic Data Transcription Related Data Allele Frequencies SNP ID Valid Clinical significance Chr 20 pos Sequence # AA Chg Type More # Allele freq Pop Total sample More
HapMap Linkage Disequilibrium report for SIRPB1 (1544167 - 1600707 bp)
Structural Variations (Copy Number Variations, Insertions/Deletions, Inversions) Database of Genomic Variants (DGV): 38 variations for SIRPB1 15/37 CNVs (see all 37 ): 35900 67634 37839 90435 7299 1522 4090 79098 90431 61903 102897 67635 35904 35902 31029 1 Indel : 102896
SABiosciences Cancer Mutation PCR Assays
QIAGEN SeqTarget long-range PCR primers in human , mouse , rat for resequencing SIRPB1
Jump to Section...
Aliases
Databases
Disorders / Diseases
Domains / Families
Drugs / Compounds
Expression
Function
Genomic Views
Intellectual Property
Orthologs
Paralogs
Pathways / Interactions
Products
Proteins
Publications
Search Box
Summaries
Transcripts
Variants
TOP
BOTTOM
Disorders
/ Diseasesfor SIRPB1 gene
(in which this Gene is Involved, According to MalaCards ,
OMIM, UniProtKB ,
the University of Copenhagen DISEASES
database ,
Genatlas , GeneTests ,
GAD ,
HuGE Navigator ,
and/or TGDB .)
About This Section
SIRPB1 for disorders About GeneDecksing
OMIM gene information: 603889
OMIM disorders : --2 diseases for SIRPB1 : About MalaCards alzheimer's disease schizophrenia 1 disease from the University of Copenhagen DISEASES database for SIRPB1 :Composite lymphoma Export disorders for SIRPB1 gene to outside databases
Jump to Section...
Aliases
Databases
Disorders / Diseases
Domains / Families
Drugs / Compounds
Expression
Function
Genomic Views
Intellectual Property
Orthologs
Paralogs
Pathways / Interactions
Products
Proteins
Publications
Search Box
Summaries
Transcripts
Variants
TOP
BOTTOM
Publicationsfor SIRPB1 gene (in
PubMed .
Associations of this gene to articles via
1 Entrez Gene ,
2 UniProtKB/Swiss-Prot ,
3 HGNC ,
4 GAD ,
5 PharmGKB ,
6 HMDB ,
7 DrugBank ,
8 UniProtKB/TrEMBL ,
9 Novoseek , and/or
10 fRNAdb )
About This Section PubMed articles for SIRPB1 gene, integrated from 9 sources (see all 22 ): (articles sorted by number of sources associating them with SIRPB1) Utopia : connect your pdf to the dynamic world of online information
A nomenclature for signal regulatory protein family m embers. (PubMed id 16339511) 1 , 3 van den Berg T.K....Barclay A.N. (2005) The DNA sequence and comparative analysis of human chromosome 20. (PubMed id 11780052) 1 , 2 Deloukas P....Rogers J. (2001) A family of proteins that inhibit signalling through tyrosine kinase receptors. (PubMed id 9062191) 1 , 3 Kharitonenkov A....Ullrich A. (1997) Signal-regulatory protein beta 1 is a DAP12-associated activating receptor expressed in myeloid cells. (PubMed id 10604985) 1 , 9 Dietrich J.... Colonna M. (2000) Association of signal-regulatory proteins beta with KARAP/DAP-12. (PubMed id 10940905) 1 , 9 Tomasello E.... Vivier E. (2000) Proteomic analysis identifies dysfunction in cellular transport, energy, and protein metabolism in different brain regions of atypical frontotemporal lobar degeneration. (PubMed id 22360420) 1 Martins-de-Souza D....Bahn S. (2012) Prefrontal cortex shotgun proteome analysis reveals altered calcium homeostasis and immune system imbalance in schizophrenia. (PubMed id 19165527) 1 Martins-de-Souza D....Turck C.W. (2009) Signal regulatory protein-beta1: a microglial modulat or of phagocytosis in Alzheimer's disease. (PubMed id 19893026) 1 Gaikwad S....Neumann H. (2009) Paired receptor specificity explained by structures of signal regulatory proteins alone and complexed with CD47. (PubMed id 18657508) 2 Hatherley D....Barclay A.N. (2008) Alterations in oligodendrocyte proteins, calcium homeostasis and new potential markers in schizophrenia anterior temporal lobe are revealed by shotgun proteome analysis. (PubMed id 19034380) 1 Martins-de-Souza D....Dias-Neto E. (2008)
Jump to Section...
Aliases
Databases
Disorders / Diseases
Domains / Families
Drugs / Compounds
Expression
Function
Genomic Views
Intellectual Property
Orthologs
Paralogs
Pathways / Interactions
Products
Proteins
Publications
Search Box
Summaries
Transcripts
Variants
TOP
BOTTOM
External Searches for SIRPB1 gene
(in PubMed ,
OMIM , and NCBI Bookshelf ) About This Section
Jump to Section...
Aliases
Databases
Disorders / Diseases
Domains / Families
Drugs / Compounds
Expression
Function
Genomic Views
Intellectual Property
Orthologs
Paralogs
Pathways / Interactions
Products
Proteins
Publications
Search Box
Summaries
Transcripts
Variants
TOP
BOTTOM
Genome Databases showing SIRPB1 gene
(According to
Entrez Gene ,
HGNC ,
AceView ,
euGenes ,
Ensembl ,
miRBase ,
ECgene ,
Kegg ,
and/or
H-InvDB )
About This Section
Jump to Section...
Aliases
Databases
Disorders / Diseases
Domains / Families
Drugs / Compounds
Expression
Function
Genomic Views
Intellectual Property
Orthologs
Paralogs
Pathways / Interactions
Products
Proteins
Publications
Search Box
Summaries
Transcripts
Variants
TOP
BOTTOM
Other Databases showing SIRPB1 gene
(According to HUGE )
About This Section --
Jump to Section...
Aliases
Databases
Disorders / Diseases
Domains / Families
Drugs / Compounds
Expression
Function
Genomic Views
Intellectual Property
Orthologs
Paralogs
Pathways / Interactions
Products
Proteins
Publications
Search Box
Summaries
Transcripts
Variants
TOP
BOTTOM
Specialized Databases showing SIRPB1 gene (According to PharmGKB ,
ATLAS , HORDE , IMGT , LEIDEN , UniProtKB/Swiss-Prot , and/or UniProtKB/TrEMBL ,Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot )About This Section
Jump to Section...
Aliases
Databases
Disorders / Diseases
Domains / Families
Drugs / Compounds
Expression
Function
Genomic Views
Intellectual Property
Orthologs
Paralogs
Pathways / Interactions
Products
Proteins
Publications
Search Box
Summaries
Transcripts
Variants
TOP
BOTTOM
About This Section Patent Information for SIRPB1 gene: Search GeneIP for patents involving SIRPB1 GeneCards and IP: Japan Patent Office Licenses GeneCards European Patent Office Licenses GeneCards Improving the IP Search
Jump to Section...
Aliases
Databases
Disorders / Diseases
Domains / Families
Drugs / Compounds
Expression
Function
Genomic Views
Intellectual Property
Orthologs
Paralogs
Pathways / Interactions
Products
Proteins
Publications
Search Box
Summaries
Transcripts
Variants
TOP
BOTTOM
Productsfor SIRPB1 gene (Antibodies, recombinant proteins, and assays from EMD Millipore , R&D Systems , OriGene , QIAGEN , GenScript , Cell Signaling Technology , SABiosciences , Novus Biologicals , Sino Biological , Enzo Life Sciences , Abcam , ProSpec , Uscn , Thermo Fisher Scientific , Gene Editing from DNA2.0 and Sirion Biotech , Clones from EMD Millipore , OriGene , GenScript , Sino Biological , DNA2.0 , SwitchGear Genomics , Vector BioLabs , Cell lines from GenScript , LifeMap BioReagents , and Sirion Biotech , PCR Arrays from SABiosciences , Drugs and/or compounds from EMD Millipore , Tocris Bioscience , and/or
Enzo Life Sciences , In Situ Hybridization Assays from Advanced Cell Diagnostics , Animal models from inGenious Targeting Laboratory )About This Section
Browse OriGene Antibodies OriGene shRNA RFP for SIRPB1 OriGene 29mer shRNA kits in GFP-retroviral vector in human , mouse , rat for SIRPB1 OriGene genome-wide validated SYBR primer pairs in human , mouse , rat for SIRPB1 OriGene Protein Over-expression Lysate for SIRPB1 Browse OriGene Fluorogenic Cell Assay Kits OriGene siRNA for SIRPB1 OriGene 3'-UTR Clone for SIRPB1 OriGene untagged cDNA clones in CMV expression vector in human , mouse , rat for SIRPB1 OriGene Myc/DDK tagged cDNA clones in CMV expression vector in human , mouse , rat for SIRPB1 Browse OriGene GFP tagged cDNA clones in CMV expression vector Browse OriGene MicroRNA Expression Plasmids Browse OriGene basic RS shRNAs Browse OriGene validated miRNA SYBR primer pairs OriGene Purified Protein for SIRPB1 OriGene custom cloning services - gene synthesis, subcloning, mutagenesis,
variant library, vector shuttling OriGene Custom Antibody Services for SIRPB1 OriGene Custom Protein Services for SIRPB1 OriGene Custom Immunoassay Development
QIAGEN Custom miScript Target Protector blocks miRNA-binding site of in human, mouse, rat SIRPB1 QIAGEN SeqTarget long-range PCR primers in human , mouse , rat for resequencing SIRPB1 QIAGEN PyroMark CpG Assay predesigned Pyrosequencing DNA Methylation assays in human, mouse, rat SIRPB1 QIAGEN FlexiTube/FlexiPlate siRNA for gene silencing in human , mouse , rat SIRPB1 QIAGEN QuantiFast Probe-based Assays in human , mouse , rat SIRPB1 QIAGEN QuantiTect SYBR Green Assays in human , mouse , rat SIRPB1
Search Tocris compounds for SIRPB1
Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for SIRPB1
Search ThermoFisher Antibodies for SIRPB1
Vector BioLabs ready-to-use adenovirus/AAV for human , mouse , rat SIRPB1
Jump to Section...
Aliases for SIRPB1
Databases for SIRPB1
Disorders / Diseases for SIRPB1
Domains / Families for SIRPB1
Drugs / Compounds for SIRPB1
Expression for SIRPB1
Function for SIRPB1
Genomic Views for SIRPB1
Intellectual Property for SIRPB1
Orthologs for SIRPB1
Paralogs for SIRPB1
Pathways / Interactions for SIRPB1
Products for SIRPB1
Proteins for SIRPB1
Publications for SIRPB1
Search Box for SIRPB1
Summaries for SIRPB1
Transcripts for SIRPB1
Variants for SIRPB1
TOP
BOTTOM