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Aliases for SIAH2-AS1 Gene

Subcategory (RNA class) for SIAH2-AS1 Gene

non-coding RNA

Quality Score for this RNA gene is

3

Aliases for SIAH2-AS1 Gene

  • SIAH2 Antisense RNA 1 2 3 5
  • SIAH2 Antisense RNA 1 (Non-Protein Coding) 2

External Ids for SIAH2-AS1 Gene

Previous GeneCards Identifiers for SIAH2-AS1 Gene

  • GC00U933065
  • GC03P150480

Summaries for SIAH2-AS1 Gene

GeneCards Summary for SIAH2-AS1 Gene

SIAH2-AS1 (SIAH2 Antisense RNA 1) is an RNA Gene, and is affiliated with the non-coding RNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for SIAH2-AS1 Gene

Genomics for SIAH2-AS1 Gene

Regulatory Elements for SIAH2-AS1 Gene

Enhancers for SIAH2-AS1 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH03F150721 1.1 Ensembl ENCODE 22.4 -40.2 -40237 0.6 ELF3 TBL1XR1 ARID4B ZSCAN9 RAD21 YY1 RFX5 ZNF143 MIXL1 ZNF654 SIAH2-AS1 SIAH2 EIF2A SNRPCP3 LOC101928105
GH03F150733 1.7 FANTOM5 Ensembl ENCODE 12 -22.5 -22524 12.4 PKNOX1 ARNT MLX ARID4B DMAP1 YY1 SLC30A9 ZNF766 ZNF143 FOS SIAH2 SIAH2-AS1 ERICH6 ERICH6-AS1 TSC22D2 SERP1 CLRN1 LOC101928105 PIR41342
GH03F150724 1.6 FANTOM5 Ensembl ENCODE 11.6 -34.3 -34287 5.6 HDGF ATF1 PKNOX1 ARNT CREB3L1 ZNF121 GATA2 ZNF143 FOS JUNB ERICH6-AS1 SIAH2 ERICH6 SIAH2-AS1 ENSG00000243273 FAM188B2 SNRPCP3 LOC101928105
GH03F150797 0.9 Ensembl ENCODE 11 +36.4 36391 0.9 GATAD2A HLF CEBPB HMG20A CEBPG ZIC2 KAT2B ZFHX2 CEBPA GLIS1 SIAH2 SIAH2-AS1 ENSG00000243273 FAM188B2 AADACP1 GC03M150810
GH03F151002 0.9 ENCODE 10.6 +241.2 241238 1.7 ELF3 TBL1XR1 RAD21 YY1 ZNF143 FOS DEK MIXL1 ZNF654 CEBPB MED12L CLRN1 EIF2A CLRN1-AS1 SIAH2-AS1 ENSG00000243273 FAM188B2 ENSG00000276055
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around SIAH2-AS1 on UCSC Golden Path with GeneCards custom track

Promoters for SIAH2-AS1 Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters
ENSR00001376702 463 4401 HDGF CREB3L1 WRNIP1 ARID4B SIN3A YBX1 FEZF1 DMAP1 ZNF2 YY1

Genomic Location for SIAH2-AS1 Gene

Chromosome:
3
Start:
150,761,937 bp from pter
End:
150,762,538 bp from pter
Size:
602 bases
Orientation:
Plus strand

Genomic View for SIAH2-AS1 Gene

Genes around SIAH2-AS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
SIAH2-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for SIAH2-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for SIAH2-AS1 Gene

Proteins for SIAH2-AS1 Gene

Post-translational modifications for SIAH2-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for SIAH2-AS1 Gene

Domains & Families for SIAH2-AS1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for SIAH2-AS1 Gene

Function for SIAH2-AS1 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for SIAH2-AS1 Gene

Localization for SIAH2-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for SIAH2-AS1 Gene

Pathways & Interactions for SIAH2-AS1 Gene

SuperPathways for SIAH2-AS1 Gene

No Data Available

Interacting Proteins for SIAH2-AS1 Gene

Gene Ontology (GO) - Biological Process for SIAH2-AS1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for SIAH2-AS1 Gene

Transcripts for SIAH2-AS1 Gene

mRNA/cDNA for SIAH2-AS1 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for SIAH2-AS1 Gene

No ASD Table

Relevant External Links for SIAH2-AS1 Gene

GeneLoc Exon Structure for
SIAH2-AS1
ECgene alternative splicing isoforms for
SIAH2-AS1

Expression for SIAH2-AS1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for SIAH2-AS1 Gene

mRNA differential expression in normal tissues according to GTEx for SIAH2-AS1 Gene

This gene is overexpressed in Whole Blood (x5.7).
genes like me logo Genes that share expression patterns with SIAH2-AS1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for SIAH2-AS1 Gene

Orthologs for SIAH2-AS1 Gene

Evolution for SIAH2-AS1 Gene

ENSEMBL:
Gene Tree for SIAH2-AS1 (if available)
TreeFam:
Gene Tree for SIAH2-AS1 (if available)

No data available for Orthologs for SIAH2-AS1 Gene

Paralogs for SIAH2-AS1 Gene

No data available for Paralogs for SIAH2-AS1 Gene

Variants for SIAH2-AS1 Gene

Relevant External Links for SIAH2-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
SIAH2-AS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for SIAH2-AS1 Gene

Disorders for SIAH2-AS1 Gene

No disorders were found for SIAH2-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for SIAH2-AS1 Gene

Publications for SIAH2-AS1 Gene

No publications were found for SIAH2-AS1 Gene.

Products for SIAH2-AS1 Gene

Sources for SIAH2-AS1 Gene

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