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Aliases for SHQ1P1 Gene

Aliases for SHQ1P1 Gene

  • SHQ1, H/ACA Ribonucleoprotein Assembly Factor Pseudogene 1 2 3 5

External Ids for SHQ1P1 Gene

Previous GeneCards Identifiers for SHQ1P1 Gene

  • GC10M052393

Summaries for SHQ1P1 Gene

GeneCards Summary for SHQ1P1 Gene

SHQ1P1 (SHQ1, H/ACA Ribonucleoprotein Assembly Factor Pseudogene 1) is a Pseudogene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for SHQ1P1 Gene

Genomics for SHQ1P1 Gene

Regulatory Elements for SHQ1P1 Gene

Enhancers for SHQ1P1 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH10F050558 0.6 Ensembl 12.7 +72.7 72722 0.4 CHD1 BRF2 NR2F2 JUND POLR2A IKZF1 HMBOX1 CREB1 SGMS1 SGMS1-AS1 SHQ1P1 RNU7-107P GC10P050546 GC10M050591
GH10F050560 0.5 Ensembl ENCODE 12.7 +69.7 69670 1.7 CTCF TBL1XR1 RAD21 ZNF316 SMC3 SCRT1 ZNF654 TRIM22 REST ZEB2 SGMS1 SGMS1-AS1 SHQ1P1 RNU7-107P BEND3P1 GC10P050546 GC10M050591
GH10F050563 1.1 ENCODE 12.7 +67.3 67266 1.2 ELF3 CTCF MXI1 SAP130 MAX ARID4B ZSCAN9 RAD21 RARA TEAD3 SGMS1 SGMS1-AS1 SHQ1P1 RNU7-107P BEND3P1 GC10P050546 GC10M050591
GH10F050652 0.7 Ensembl ENCODE 12.1 -22.5 -22539 2.1 CTCF ZNF654 NR2F1 MAFG REST RAD21 RFX5 ZNF316 FOXK2 IKZF1 SGMS1-AS1 SHQ1P1 SGMS1 BEND3P1
GH10F050554 1 Ensembl ENCODE 11.8 +75.5 75469 2.6 PKNOX1 ATF1 ARNT CREB3L1 SIN3A DMAP1 ZNF2 ZNF48 GLIS2 GATA2 SGMS1 BEND3P1 SGMS1-AS1 SHQ1P1 RNU7-107P GC10P050546 GC10M050591
- Elite enhancer/Elite enhancer-gene association Download Table
Download GeneHancer data dump

Enhancers around SHQ1P1 on UCSC Golden Path with GeneCards custom track

Genomic Location for SHQ1P1 Gene

Chromosome:
10
Start:
50,629,327 bp from pter
End:
50,631,322 bp from pter
Size:
1,996 bases
Orientation:
Minus strand

Genomic View for SHQ1P1 Gene

Genes around SHQ1P1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
SHQ1P1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for SHQ1P1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for SHQ1P1 Gene

Proteins for SHQ1P1 Gene

Post-translational modifications for SHQ1P1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for SHQ1P1 Gene

Domains & Families for SHQ1P1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for SHQ1P1 Gene

Function for SHQ1P1 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for SHQ1P1 Gene

Localization for SHQ1P1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for SHQ1P1 Gene

Pathways & Interactions for SHQ1P1 Gene

SuperPathways for SHQ1P1 Gene

No Data Available

Interacting Proteins for SHQ1P1 Gene

Gene Ontology (GO) - Biological Process for SHQ1P1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for SHQ1P1 Gene

Transcripts for SHQ1P1 Gene

mRNA/cDNA for SHQ1P1 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for SHQ1P1 Gene

No ASD Table

Relevant External Links for SHQ1P1 Gene

GeneLoc Exon Structure for
SHQ1P1
ECgene alternative splicing isoforms for
SHQ1P1

Expression for SHQ1P1 Gene

NURSA nuclear receptor signaling pathways regulating expression of SHQ1P1 Gene:

SHQ1P1
No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for SHQ1P1 Gene

Orthologs for SHQ1P1 Gene

Evolution for SHQ1P1 Gene

ENSEMBL:
Gene Tree for SHQ1P1 (if available)
TreeFam:
Gene Tree for SHQ1P1 (if available)

No data available for Orthologs for SHQ1P1 Gene

Paralogs for SHQ1P1 Gene

No data available for Paralogs for SHQ1P1 Gene

Variants for SHQ1P1 Gene

Relevant External Links for SHQ1P1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
SHQ1P1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for SHQ1P1 Gene

Disorders for SHQ1P1 Gene

No disorders were found for SHQ1P1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for SHQ1P1 Gene

Publications for SHQ1P1 Gene

No publications were found for SHQ1P1 Gene.

Products for SHQ1P1 Gene

Sources for SHQ1P1 Gene

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