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Aliases for SHANK2-AS2 Gene

Subcategory (RNA class) for SHANK2-AS2 Gene

non-coding RNA

Quality Score for this RNA gene is


Aliases for SHANK2-AS2 Gene

  • SHANK2 Antisense RNA 2 2 3 5
  • SHANK2 Antisense RNA 2 (Non-Protein Coding) 2

External Ids for SHANK2-AS2 Gene

Previous GeneCards Identifiers for SHANK2-AS2 Gene

  • GC00U933197
  • GC11P070493

Summaries for SHANK2-AS2 Gene

GeneCards Summary for SHANK2-AS2 Gene

SHANK2-AS2 (SHANK2 Antisense RNA 2) is an RNA Gene, and is affiliated with the non-coding RNA class.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for SHANK2-AS2 Gene

Genomics for SHANK2-AS2 Gene

Regulatory Elements for SHANK2-AS2 Gene

Enhancers for SHANK2-AS2 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH11G070567 1 Ensembl ENCODE 11.1 -77.6 -77642 1.8 CTCF SIN3A RAD21 ZBTB40 CTBP1 POLR2A SMC3 FOS RCOR1 ZNF687 SHANK2-AS2 GC11P070576 PIR38310
GH11G070531 0.9 ENCODE dbSUPER 10.4 -114.0 -113957 1.4 BCOR SMARCA5 CTCF ESRRA TEAD4 ZMYM3 ZIC2 HDAC2 ADNP CTBP2 SHANK2-AS2 PIR38310 GC11P070576
GH11G070699 0.8 ENCODE 10.9 +53.7 53695 0.2 TFAP4 MXI1 USF1 SAP130 SUZ12 ARID4B MAX ETS1 NFYB ZNF143 SHANK2-AS2 ENSG00000207196 GC11M070712 GC11M070662
GH11G070517 0.8 Ensembl ENCODE 10.6 -127.6 -127593 1.5 FOSL1 JUND ATF3 TAF1 SHANK2-AS2 PPFIA1 PIR38310 GC11P070576
GH11G070544 0.8 ENCODE dbSUPER 10.4 -100.9 -100869 1.5 IRF9 ZNF707 CAVIN1 DDX20 ID3 PTTG1 ZNF592 SHANK2-AS2 GC11P070576 PIR38310
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around SHANK2-AS2 on UCSC Golden Path with GeneCards custom track

Genomic Location for SHANK2-AS2 Gene

70,646,165 bp from pter
70,647,562 bp from pter
1,398 bases
Plus strand

Genomic View for SHANK2-AS2 Gene

Genes around SHANK2-AS2 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
SHANK2-AS2 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for SHANK2-AS2 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for SHANK2-AS2 Gene

Proteins for SHANK2-AS2 Gene

Post-translational modifications for SHANK2-AS2 Gene

No Post-translational modifications

No data available for DME Specific Peptides for SHANK2-AS2 Gene

Domains & Families for SHANK2-AS2 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for SHANK2-AS2 Gene

Function for SHANK2-AS2 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for SHANK2-AS2 Gene

Localization for SHANK2-AS2 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for SHANK2-AS2 Gene

Pathways & Interactions for SHANK2-AS2 Gene

SuperPathways for SHANK2-AS2 Gene

No Data Available

Interacting Proteins for SHANK2-AS2 Gene

Gene Ontology (GO) - Biological Process for SHANK2-AS2 Gene


No data available for Pathways by source and SIGNOR curated interactions for SHANK2-AS2 Gene

Drugs & Compounds for SHANK2-AS2 Gene

No Compound Related Data Available

Transcripts for SHANK2-AS2 Gene

mRNA/cDNA for SHANK2-AS2 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for SHANK2-AS2 Gene

No ASD Table

Relevant External Links for SHANK2-AS2 Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for SHANK2-AS2 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for SHANK2-AS2 Gene

mRNA differential expression in normal tissues according to GTEx for SHANK2-AS2 Gene

This gene is overexpressed in Testis (x28.2) and Pituitary (x4.8).
genes like me logo Genes that share expression patterns with SHANK2-AS2: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for SHANK2-AS2 Gene

Orthologs for SHANK2-AS2 Gene

Evolution for SHANK2-AS2 Gene

Gene Tree for SHANK2-AS2 (if available)
Gene Tree for SHANK2-AS2 (if available)

No data available for Orthologs for SHANK2-AS2 Gene

Paralogs for SHANK2-AS2 Gene

No data available for Paralogs for SHANK2-AS2 Gene

Variants for SHANK2-AS2 Gene

Relevant External Links for SHANK2-AS2 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for SHANK2-AS2 Gene

Disorders for SHANK2-AS2 Gene

No disorders were found for SHANK2-AS2 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for SHANK2-AS2 Gene

Publications for SHANK2-AS2 Gene

No publications were found for SHANK2-AS2 Gene.

Products for SHANK2-AS2 Gene

Sources for SHANK2-AS2 Gene

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