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Aliases for SHANK2-AS2 Gene

Subcategory (RNA class) for SHANK2-AS2 Gene

non-coding RNA

Quality Score for this RNA gene is

3

Aliases for SHANK2-AS2 Gene

  • SHANK2 Antisense RNA 2 2 3 5
  • SHANK2 Antisense RNA 2 (Non-Protein Coding) 2

External Ids for SHANK2-AS2 Gene

Previous GeneCards Identifiers for SHANK2-AS2 Gene

  • GC00U933197
  • GC11P070493

Summaries for SHANK2-AS2 Gene

GeneCards Summary for SHANK2-AS2 Gene

SHANK2-AS2 (SHANK2 Antisense RNA 2) is an RNA Gene, and is affiliated with the non-coding RNA class.

Additional gene information for SHANK2-AS2 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for SHANK2-AS2 Gene

Genomics for SHANK2-AS2 Gene

GeneHancer (GH) Regulatory Elements for SHANK2-AS2 Gene

Promoters and enhancers for SHANK2-AS2 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH11I070646 Enhancer 0.6 ENCODE 550.8 +0.4 403 0.3 ZBTB11 ZFP64 ZNF140 ZNF266 ZC3H11A ZNF623 ZNF781 ZNF518A ZNF697 ZNF555 SHANK2-AS2 ORAOV1 NADSYN1 FADD CTTN ENSG00000254495 GC11M070662 SHANK2
GH11I070647 Enhancer 0.5 ENCODE 550.8 +1.5 1480 1.1 USF1 ZBTB11 POU5F1 MAFK ETS1 ZKSCAN1 SHANK2-AS2 GC11M070662 SHANK2
GH11I070567 Enhancer 0.9 Ensembl ENCODE 11.1 -77.6 -77642 1.8 NCOA3 CTCF CLOCK SIN3A ZBTB40 CTBP1 POLR2A VEZF1 ZNF444 RCOR1 SHANK2-AS2 GC11P070576 PIR38310 SHANK2
GH11I070469 Enhancer 0.8 ENCODE 10.1 -175.9 -175869 1.1 HDAC1 TCF12 ZNF766 GATA2 ATF7 IKZF2 RUNX3 SMARCA5 MEF2D NFIC SHANK2-AS2 GC11M070454 GC11P070476 GC11P070475 SHANK2
GH11I070699 Enhancer 0.7 ENCODE 10.9 +53.7 53694 0.2 TFAP4 MXI1 USF1 SUZ12 SAP130 ARID4B MAX ETS1 ZNF507 ZNF143 SHANK2-AS2 ENSG00000207196 GC11M070714 GC11M070662 SHANK2
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around SHANK2-AS2 on UCSC Golden Path with GeneCards custom track

Genomic Locations for SHANK2-AS2 Gene

Genomic Locations for SHANK2-AS2 Gene
chr11:70,646,165-70,647,562
(GRCh38/hg38)
Size:
1,398 bases
Orientation:
Plus strand
chr11:70,492,270-70,493,667
(GRCh37/hg19)

Genomic View for SHANK2-AS2 Gene

Genes around SHANK2-AS2 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
SHANK2-AS2 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for SHANK2-AS2 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for SHANK2-AS2 Gene

Proteins for SHANK2-AS2 Gene

Post-translational modifications for SHANK2-AS2 Gene

No Post-translational modifications

No data available for DME Specific Peptides for SHANK2-AS2 Gene

Domains & Families for SHANK2-AS2 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for SHANK2-AS2 Gene

Function for SHANK2-AS2 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for SHANK2-AS2 Gene

Localization for SHANK2-AS2 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for SHANK2-AS2 Gene

Pathways & Interactions for SHANK2-AS2 Gene

SuperPathways for SHANK2-AS2 Gene

No Data Available

Interacting Proteins for SHANK2-AS2 Gene

Gene Ontology (GO) - Biological Process for SHANK2-AS2 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for SHANK2-AS2 Gene

Drugs & Compounds for SHANK2-AS2 Gene

No Compound Related Data Available

Transcripts for SHANK2-AS2 Gene

mRNA/cDNA for SHANK2-AS2 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for SHANK2-AS2 Gene

No ASD Table

Relevant External Links for SHANK2-AS2 Gene

GeneLoc Exon Structure for
SHANK2-AS2
ECgene alternative splicing isoforms for
SHANK2-AS2

Expression for SHANK2-AS2 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for SHANK2-AS2 Gene

mRNA differential expression in normal tissues according to GTEx for SHANK2-AS2 Gene

This gene is overexpressed in Testis (x28.2) and Pituitary (x4.8).
genes like me logo Genes that share expression patterns with SHANK2-AS2: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for SHANK2-AS2 Gene

Orthologs for SHANK2-AS2 Gene

Evolution for SHANK2-AS2 Gene

ENSEMBL:
Gene Tree for SHANK2-AS2 (if available)
TreeFam:
Gene Tree for SHANK2-AS2 (if available)

No data available for Orthologs for SHANK2-AS2 Gene

Paralogs for SHANK2-AS2 Gene

No data available for Paralogs for SHANK2-AS2 Gene

Variants for SHANK2-AS2 Gene

Additional Variant Information for SHANK2-AS2 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
SHANK2-AS2

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for SHANK2-AS2 Gene

Disorders for SHANK2-AS2 Gene

No disorders were found for SHANK2-AS2 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for SHANK2-AS2 Gene

Publications for SHANK2-AS2 Gene

No publications were found for SHANK2-AS2 Gene.

Products for SHANK2-AS2 Gene

Sources for SHANK2-AS2 Gene

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