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Aliases for SH3RF3-AS1 Gene

Subcategory (RNA class) for SH3RF3-AS1 Gene

antisense

Quality Score for this RNA gene is

3

Aliases for SH3RF3-AS1 Gene

  • SH3RF3 Antisense RNA 1 2 3
  • SH3RF3 Antisense RNA 1 (Non-Protein Coding) 2

External Ids for SH3RF3-AS1 Gene

ORGUL Members for SH3RF3-AS1 Gene

Previous GeneCards Identifiers for SH3RF3-AS1 Gene

  • GC02M109745

Summaries for SH3RF3-AS1 Gene

GeneCards Summary for SH3RF3-AS1 Gene

SH3RF3-AS1 (SH3RF3 Antisense RNA 1) is an RNA Gene, and is affiliated with the antisense RNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for SH3RF3-AS1 Gene

Genomics for SH3RF3-AS1 Gene

Genomic Location for SH3RF3-AS1 Gene

Start:
109,127,327 bp from pter
End:
109,130,119 bp from pter
Size:
2,793 bases
Orientation:
Minus strand

Genomic View for SH3RF3-AS1 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for SH3RF3-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for SH3RF3-AS1 Gene

No data available for Regulatory Elements for SH3RF3-AS1 Gene

Proteins for SH3RF3-AS1 Gene

Post-translational modifications for SH3RF3-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for SH3RF3-AS1 Gene

Domains for SH3RF3-AS1 Gene

Gene Families for SH3RF3-AS1 Gene

HGNC:
  • LNCRNA :Long non-coding RNAs

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with SH3RF3-AS1: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for SH3RF3-AS1 Gene

Function for SH3RF3-AS1 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for SH3RF3-AS1 Gene

Localization for SH3RF3-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for SH3RF3-AS1 Gene

Pathways for SH3RF3-AS1 Gene

SuperPathways for SH3RF3-AS1 Gene

No Data Available

Interacting Proteins for SH3RF3-AS1 Gene

Gene Ontology (GO) - Biological Process for SH3RF3-AS1 Gene

None

No data available for Pathways by source for SH3RF3-AS1 Gene

Transcripts for SH3RF3-AS1 Gene

mRNA/cDNA for SH3RF3-AS1 Gene

(2) Ensembl transcripts including schematic representations, and UCSC links where relevant :

miRNA Products

  • QIAGEN qRT-PCR Assays for microRNAs that regulate SH3RF3-AS1
    • Block miRNA regulation of SH3RF3-AS1 using miScript Target Protectors

    Primer Products

    • QuantiTect SYBR Green Assays in human,mouse,rat
    • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
    • QuantiFast Probe-based Assays in human,mouse,rat

    Flow Cytometry Products

    Alternative Splicing Database (ASD) splice patterns (SP) for SH3RF3-AS1 Gene

    No ASD Table

    Relevant External Links for SH3RF3-AS1 Gene

    GeneLoc Exon Structure for
    SH3RF3-AS1
    ECgene alternative splicing isoforms for
    SH3RF3-AS1

    Expression for SH3RF3-AS1 Gene

    mRNA expression in normal human tissues for SH3RF3-AS1 Gene

    mRNA differential expression in normal tissues according to GTEx for SH3RF3-AS1 Gene

    This gene is overexpressed in Artery - Aorta (4.3) and Artery - Tibial (4.2).
    genes like me logo Genes that share expressions with SH3RF3-AS1: view

    In Situ Assay Products

    No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein expression and mRNA Expression by UniProt/SwissProt for SH3RF3-AS1 Gene

    Orthologs for SH3RF3-AS1 Gene

    Evolution for SH3RF3-AS1 Gene

    ENSEMBL:
    Gene Tree for SH3RF3-AS1 (if available)
    TreeFam:
    Gene Tree for SH3RF3-AS1 (if available)

    No data available for Orthologs for SH3RF3-AS1 Gene

    Paralogs for SH3RF3-AS1 Gene

    No data available for Paralogs for SH3RF3-AS1 Gene

    Variants for SH3RF3-AS1 Gene

    Sequence variations from dbSNP and Humsavar for SH3RF3-AS1 Gene

    SNP ID Clin Chr 02 pos Sequence Context AA Info Type MAF
    rs118067561 -- 109,126,927(+) TACCA(A/T)CTGCT downstream-variant-500B
    rs139328706 -- 109,127,335(+) CATTA(A/G)TTCTA nc-transcript-variant
    rs141978130 -- 109,126,844(+) AGGGC(A/G)TGTCG downstream-variant-500B
    rs146897321 -- 109,126,999(+) TGAAA(C/G)GTGGC downstream-variant-500B
    rs148417808 -- 109,127,280(+) GTGAT(-/GA)GAGAG downstream-variant-500B

    Relevant External Links for SH3RF3-AS1 Gene

    HapMap Linkage Disequilibrium report
    SH3RF3-AS1

    No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Structural Variations from Database of Genomic Variants (DGV) for SH3RF3-AS1 Gene

    Disorders for SH3RF3-AS1 Gene

    No disorders were found for SH3RF3-AS1 Gene.

    No data available for UniProtKB/Swiss-Prot for SH3RF3-AS1 Gene

    Publications for SH3RF3-AS1 Gene

    1. A "double adaptor" method for improved shotgun library construction. (PMID: 8619474) Andersson B. … Gibbs R.A. (Anal. Biochem. 1996) 3
    2. Large-scale concatenation cDNA sequencing. (PMID: 9110174) Yu W. … Gibbs R.A. (Genome Res. 1997) 3

    Products for SH3RF3-AS1 Gene

    Sources for SH3RF3-AS1 Gene

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