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Aliases for SH3RF3-AS1 Gene

Subcategory (RNA class) for SH3RF3-AS1 Gene

antisense

Quality Score for this RNA gene is

3

Aliases for SH3RF3-AS1 Gene

  • SH3RF3 Antisense RNA 1 2 3
  • SH3RF3 Antisense RNA 1 (Non-Protein Coding) 2

External Ids for SH3RF3-AS1 Gene

ORGUL Members for SH3RF3-AS1 Gene

Previous GeneCards Identifiers for SH3RF3-AS1 Gene

  • GC02M109745

Summaries for SH3RF3-AS1 Gene

GeneCards Summary for SH3RF3-AS1 Gene

SH3RF3-AS1 (SH3RF3 Antisense RNA 1) is an RNA Gene, and is affiliated with the antisense RNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for SH3RF3-AS1 Gene

Genomics for SH3RF3-AS1 Gene

Genomic Location for SH3RF3-AS1 Gene

Chromosome:
2
Start:
109,127,327 bp from pter
End:
109,130,119 bp from pter
Size:
2,793 bases
Orientation:
Minus strand

Genomic View for SH3RF3-AS1 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
GeneLoc Logo Gene Density

RefSeq DNA sequence for SH3RF3-AS1 Gene

No data available for Regulatory Elements for SH3RF3-AS1 Gene

Proteins for SH3RF3-AS1 Gene

Post-translational modifications for SH3RF3-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for SH3RF3-AS1 Gene

Domains & Families for SH3RF3-AS1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for SH3RF3-AS1 Gene

Function for SH3RF3-AS1 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for SH3RF3-AS1 Gene

Localization for SH3RF3-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for SH3RF3-AS1 Gene

Pathways & Interactions for SH3RF3-AS1 Gene

SuperPathways for SH3RF3-AS1 Gene

No Data Available

Interacting Proteins for SH3RF3-AS1 Gene

Gene Ontology (GO) - Biological Process for SH3RF3-AS1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for SH3RF3-AS1 Gene

Drugs & Compounds for SH3RF3-AS1 Gene

No Compound Related Data Available

Transcripts for SH3RF3-AS1 Gene

mRNA/cDNA for SH3RF3-AS1 Gene

(2) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for SH3RF3-AS1 Gene

No ASD Table

Relevant External Links for SH3RF3-AS1 Gene

GeneLoc Exon Structure for
SH3RF3-AS1
ECgene alternative splicing isoforms for
SH3RF3-AS1

Expression for SH3RF3-AS1 Gene

mRNA expression in normal human tissues for SH3RF3-AS1 Gene

mRNA differential expression in normal tissues according to GTEx for SH3RF3-AS1 Gene

This gene is overexpressed in Artery - Aorta (x4.3) and Artery - Tibial (x4.2).
genes like me logo Genes that share expression patterns with SH3RF3-AS1: view

Primer Products

  • QuantiTect SYBR Green Assays in human,mouse,rat
  • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
  • QuantiFast Probe-based Assays in human,mouse,rat

In Situ Assay Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , mRNA Expression by UniProt/SwissProt and Protein tissue co-expression partners for SH3RF3-AS1 Gene

Orthologs for SH3RF3-AS1 Gene

Evolution for SH3RF3-AS1 Gene

ENSEMBL:
Gene Tree for SH3RF3-AS1 (if available)
TreeFam:
Gene Tree for SH3RF3-AS1 (if available)

No data available for Orthologs for SH3RF3-AS1 Gene

Paralogs for SH3RF3-AS1 Gene

No data available for Paralogs for SH3RF3-AS1 Gene

Variants for SH3RF3-AS1 Gene

Sequence variations from dbSNP and Humsavar for SH3RF3-AS1 Gene

SNP ID Clin Chr 02 pos Sequence Context AA Info Type MAF
rs118067561 -- 109,126,927(+) TACCA(A/T)CTGCT downstream-variant-500B
rs139328706 -- 109,127,335(+) CATTA(A/G)TTCTA nc-transcript-variant
rs141978130 -- 109,126,844(+) AGGGC(A/G)TGTCG downstream-variant-500B
rs146897321 -- 109,126,999(+) TGAAA(A/C/G)GTGGC downstream-variant-500B
rs148417808 -- 109,127,280(+) GTGAT(-/GA)GAGAG downstream-variant-500B

Relevant External Links for SH3RF3-AS1 Gene

HapMap Linkage Disequilibrium report
SH3RF3-AS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for SH3RF3-AS1 Gene

Disorders for SH3RF3-AS1 Gene

Relevant External Links for SH3RF3-AS1

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
SH3RF3-AS1
genes like me logo Genes that share disorders with SH3RF3-AS1: view

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for SH3RF3-AS1 Gene

Publications for SH3RF3-AS1 Gene

  1. Large-scale concatenation cDNA sequencing. (PMID: 9110174) Yu W. … Gibbs R.A. (Genome Res. 1997) 67
  2. A "double adaptor" method for improved shotgun library construction. (PMID: 8619474) Andersson B. … Gibbs R.A. (Anal. Biochem. 1996) 67

Products for SH3RF3-AS1 Gene

Sources for SH3RF3-AS1 Gene

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