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Category   Symbol Source: HGNC EntrezGene Ensembl GeneCards RNA genes CroW21
GIFtS

SH3RF1 Gene

protein-coding   GIFtS: 56
GCID: GC04M170015

SH3 domain containing ring finger 1

(Previous name: SH3 multiple domains 2 )
(Previous symbol: SH3MD2)
 Explore 3 diseases affiliated with
SH3RF1 via our new
 Human Malady Compendium 
Biological research products
for SH3RF1
    

(According to 1HGNC, 2Entrez Gene,
3UniProtKB/Swiss-Prot, 4UniProtKB/TrEMBL, 5OMIM, 6GeneLoc, 7Ensembl, 8DME, 9miRBase, and/or 10fRNAdb)
About This Section

Aliases
SH3 Domain Containing Ring Finger 11 2     SH3 Domain-Containing RING Finger Protein 12 3
POSH1 2 3     SH3 Multiple Domains Protein 22 3
RNF1421 2 3     E3 Ubiquitin-Protein Ligase SH3RF12
SH3MD21 2 3     Plenty Of SH3 Domains2
SH3 Multiple Domains 21 2     Putative E3 Ubiquitin-Protein Ligase SH3RF12
KIAA14941 3     EC 6.3.2.-3
Plenty Of SH3s2 3     Protein POSH3
RING Finger Protein 1422 3     EC 6.3.28

External Ids:    HGNC: 176501   Entrez Gene: 576302   Ensembl: ENSG000001544477   UniProtKB: Q7Z6J03   

Export aliases for SH3RF1 gene to outside databases

Previous GC identifers: GC04M170251 GC04M165769


(According to Entrez Gene, Tocris Bioscience, Wikipedia's Gene Wiki, PharmGKB,
UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL)
About This Section

Entrez Gene summary for SH3RF1:
This gene encodes a protein containing an N-terminus RING-finger, four SH3 domains, and a region implicated in binding
of the Rho GTPase Rac. Via the RING-finger, the encoded protein has been shown to function as an ubiquitin-protein
ligase involved in protein sorting at the trans-Golgi network. The encoded protein may also act as a scaffold for the
c-Jun N-terminal kinase signaling pathway, facilitating the formation of a functional signaling module. (provided by
RefSeq, Jul 2008)

UniProtKB/Swiss-Prot: SH3R1_HUMAN, Q7Z6J0
Function: Acts as a scaffold protein, contributes to Rac-induced signal transduction such as JNKs (MAPK8 and MAPK9)
activation and induces apoptosis. Within a signaling complex, it probably recruits protein kinases such as MAP3K10 or
MAP3K11 which are in turn activated leading to the sequential activation of MAP2K4, MAP2K7 and JNKs (MAPK8 and MAPK9)
(By similarity). May be involved in targeting of HIV-1 GAG and GAG-POL polyproteins to the plasma membrane
Function: Might act as an E3 ubiquitin-protein ligase, or as part of E3 complex, which accepts ubiquitin from specific
E2 ubiquitin-conjugating enzymes such as UBE2D1 or UBE2N and then transfers it to substrates. In the absence of an
external substrate, it can catalyze self-ubiquitination. Stimulates ubiquitination of potassium channel KCNJ1,
enhancing it's dynamin-dependent and clathrin-independent endocytosis
Function: Plays an essential role in the targeting of HIV-1 Gag to the plasma membrane, this function is dependent on
it's RING domain, and hence it's E3 ligase activity

Gene Wiki entry for SH3RF1


(According to GeneLoc and/or HGNC, and/or
Entrez Gene (NCBI build 37),
and/or miRBase,
Genomic Views according to UCSC (hg19) and Ensembl (release 69), Regulatory elements and Epigenetics data according to QIAGEN, SABiosciences, and/or SwitchGear Genomics)
About This Section
RefSeq DNA sequence:
NC_000004.11  NC_018915.1  NT_016354.19  
Regulatory elements:
   SABiosciences Regulatory transcription factor binding sites in the SH3RF1 gene promoter:
         TBP   NF-1   NF-1/L   AP-1   Egr-1   ATF-2   Egr-4   FOXJ2 (long isoform)   c-Jun   
         Other transcription factors

SwitchGear Promoter luciferase reporter plasmidSH3RF1 promoter sequence
   Search SABiosciences Chromatin IP Primers for SH3RF1

Epigenetics:
QIAGEN PyroMark CpG Assay predesigned Pyrosequencing DNA Methylation assays in human, mouse, rat SH3RF1


Genomic Location:
Genomic View: UCSC Golden Path with GeneCards custom track

Entrez Gene cytogenetic band: 4q32.3   Ensembl cytogenetic band:  4q33   HGNC cytogenetic band: 4q32.3

SH3RF1 Gene in genomic location: bands according to Ensembl, locations according to (and/or Entrez Gene and/or Ensembl if different)
SH3RF1 gene location

GeneLoc information about chromosome 4         GeneLoc Exon Structure

GeneLoc location for GC04M170015:  view genomic region     (about GC identifiers)

Start:
170,015,407 bp from pter      End:
170,192,256 bp from pter
Size:
176,850 bases      Orientation:
minus strand

(According to 1UniProtKB, HORDE, neXtProt, Ensembl, and/or Reactome, Modification sites according to 2PhosphoSitePlus, Specific Peptides from DME, Protein expression images according to data from SPIRE MOPED and PaxDb, RefSeq according to NCBI, PDB rendering according to OCA and/or Proteopedia, Recombinant Proteins from EMD Millipore, R&D Systems, GenScript, Enzo Life Sciences, OriGene, Novus Biologicals, Sino Biological, ProSpec, and/or Uscn,
Biochemical Assays by EMD Millipore, R&D Systems, OriGene, GenScript, Cell Signaling Technology, Enzo Life Sciences, and/or Uscn, Ontologies according to Gene Ontology Consortium 01 Mar 2013 and Entrez Gene, Antibodies by EMD Millipore, R&D Systems, GenScript, Cell Signaling Technology, OriGene, Novus Biologicals, Thermo Fisher Scientific, Abcam, and/or Uscn)
About This Section

UniProtKB/Swiss-Prot: SH3R1_HUMAN, Q7Z6J0 (See protein sequence)
Recommended Name: E3 ubiquitin-protein ligase SH3RF1  
Size: 888 amino acids; 93129 Da
Subunit: Interacts with Rac; in a GTP-dependent manner (By similarity). Interacts with MAP3K10 and MAP3K11. Interacts
with MAPK8IP; this interaction leads to the PJAC complex (POSH-JIP or SH3RF1/MAPK8IP apoptotic complex) with a 1:1
ratio. Interacts with SIAH1. Interacts with HERP1. Probably part of a signaling complex that may contain SH3RF1,
MAPK8IP, DLK1, MAP2K4, MAP2K7, MAPK8, MAPK9, AKT1 and AKT2
Subcellular location: Cytoplasm, perinuclear region (By similarity). Cell projection, lamellipodium. Cytoplasm. Golgi
apparatus, trans-Golgi network. Note=Colocalizes, with AKT2, in lamellipodia (By similarity). Colocalizes, with HERP1,
in trans-Golgi network
Sequence caution: Sequence=AAH33203.1; Type=Frameshift; Positions=182; Sequence=AAH33203.1; Type=Miscellaneous
discrepancy; Note=Contaminating sequence. Potential poly-A sequence; Sequence=AAH53671.1; Type=Miscellaneous
discrepancy; Note=Contaminating sequence. Sequence of unknown origin in the middle of the protein;
Secondary accessions: Q05BT2 Q8IW46 Q9HAM2 Q9P234
Alternative splicing: 2 isoforms:  Q7Z6J0-1   Q7Z6J0-3   (No experimental confirmation available)

Explore the universe of human proteins at neXtProt for SH3RF1: NX_Q7Z6J0

Post-translational modifications:

  • Phosphorylated at Ser-304 by AKT1 and AKT2. When phosphorylated, it has reduced ability to bind Rac1
  • Subject to ubiquitination and proteasomal degradation (By similarity)1
  • View modification sites using PhosphoSitePlus2
  • View neXtProt modification sites for NX_Q7Z6J0

  • 4/19 DME Specific Peptides for SH3RF1 (Q7Z6J0) (see all 19)
     LLECPVC  HIQTSPQ  RVDENWAEG  PVLISSSNP 

    SH3RF1 Protein expression data from MOPED and PaxDb:    About this image 
    SH3RF1 Protein Expression
    REFSEQ proteins: NP_065921.2  
    ENSEMBL proteins: 
     ENSP00000284637   ENSP00000426418   ENSP00000427585   ENSP00000421714  

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    Uscn Proteins for SH3RF1

    Gene Ontology (GO): 4 cellular component terms (GO ID links to tree view):    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0005794Golgi apparatus IEA--
    GO:0005829cytosol IDA--
    GO:0030027lamellipodium IEA--
    GO:0048471perinuclear region of cytoplasm IEA--

    SH3RF1 for ontologies           About GeneDecksing



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    Uscn ELISAs and CLIAs for SH3RF1


    (According to InterPro, ProtoNet, UniProtKB, and/or BLOCKS, Sets of similar genes according to GeneDecks)
    About This Section

    SH3RF1 for domains           About GeneDecksing

    5 InterPro domains/families:
     IPR017907 Znf_RING_CS
     IPR001841 Znf_RING
     IPR000108 p67phox
     IPR001452 SH3_domain
     IPR013083 Znf_RING/FYVE/PHD

    Graphical View of Domain Structure for InterPro Entry Q7Z6J0

    ProtoNet protein and cluster: Q7Z6J0

    1 Blocks protein family: IPB001841 Zn-finger

    UniProtKB/Swiss-Prot: SH3R1_HUMAN, Q7Z6J0
    Domain: The RING finger domain is responsible of ubiquitination and proteasomal degradation
    Similarity: Belongs to the SH3RF family
    Similarity: Contains 1 RING-type zinc finger
    Similarity: Contains 4 SH3 domains


    (According to 1UniProtKB, Genatlas, LifeMap Discovery™, IUBMB, and/or 2DME, Human phenotypes from GenomeRNAi, Animal models from MGI Mar 06 2013, inGenious Targeting Laboratory,
    bound targets from SABiosciences, miRNA Gene Targets from miRTarBase, shRNA from OriGene, Sirion Biotech, RNAi from EMD Millipore, siRNAs from OriGene, QIAGEN, microRNA from QIAGEN, Gene Editing from DNA2.0, Sirion Biotech, Clones from EMD Millipore, OriGene, SwitchGear Genomics, GenScript, Sino Biological, DNA2.0, and Vector BioLabs, Cell Lines from GenScript, LifeMap BioReagents, Sirion Biotech, In Situ Hybridization Assays from Advanced Cell Diagnostics, Ontologies according to Gene Ontology Consortium 01 Mar 2013 via Entrez Gene.)
    About This Section

    Molecular Function:

         UniProtKB/Swiss-Prot Summary: SH3R1_HUMAN, Q7Z6J0
    Function: Acts as a scaffold protein, contributes to Rac-induced signal transduction such as JNKs (MAPK8 and MAPK9)
    activation and induces apoptosis. Within a signaling complex, it probably recruits protein kinases such as MAP3K10 or
    MAP3K11 which are in turn activated leading to the sequential activation of MAP2K4, MAP2K7 and JNKs (MAPK8 and MAPK9)
    (By similarity). May be involved in targeting of HIV-1 GAG and GAG-POL polyproteins to the plasma membrane
    Function: Might act as an E3 ubiquitin-protein ligase, or as part of E3 complex, which accepts ubiquitin from specific
    E2 ubiquitin-conjugating enzymes such as UBE2D1 or UBE2N and then transfers it to substrates. In the absence of an
    external substrate, it can catalyze self-ubiquitination. Stimulates ubiquitination of potassium channel KCNJ1,
    enhancing it's dynamin-dependent and clathrin-independent endocytosis
    Function: Plays an essential role in the targeting of HIV-1 Gag to the plasma membrane, this function is dependent on
    it's RING domain, and hence it's E3 ligase activity

         Enzyme Numbers (IUBMB): EC 6.3.2.-1 EC 6.3.22

         Gene Ontology (GO): 4 molecular function terms (GO ID links to tree view):    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0005078MAP-kinase scaffold activity IEA--
    GO:0005515protein binding IPI--
    GO:0008270zinc ion binding IEA--
    GO:0016874ligase activity IEA--
         
    SH3RF1 for ontologies           About GeneDecksing


    Animal Models:
       inGenious Targeting Laboratory - Customizable classic, inducible, and humanized mouse model solutions for SH3RF1 

    miRNA
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    In Situ Assay
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    Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for SH3RF1


    (Pathways according to EMD Millipore, R&D Systems, Cell Signaling Technology, KEGG, PharmGKB, BioSystems, Reactome, Tocris Bioscience, GeneGo (Thomson Reuters), QIAGEN, and/or UniProtKB, Sets of similar genes according to GeneDecks, Interaction Networks according to SABiosciences, and/or STRING, Interactions according to 1UniProtKB, 2MINT, 3I2D, and/or 4STRING, with links to IntAct and Ensembl, Ontologies according to Gene Ontology Consortium 01 Mar 2013 via Entrez Gene).
    About This Section

    Unified GeneCards pathways  About this table 
    See pathways by source

    Super-pathwaycontained gene-specific pathways
    1G13 Signaling Pathway
    G13 Signaling Pathway1.00


    1 BioSystems Pathway for SH3RF1 
        G13 Signaling Pathway


    UniProtKB/Swiss-Prot: SH3R1_HUMAN, Q7Z6J0
    Pathway: Protein modification; protein ubiquitination

    Interactions:

        SABiosciences Gene Network CentralTM Interacting Genes and Proteins Network for SH3RF1

    STRING Interaction Network Preview (showing 5 interactants - click image to see 20)

    5/22 Interacting proteins for SH3RF1 (Q7Z6J01, 3 ENSP000002846374) via UniProtKB, MINT, STRING, and/or I2D (see all 22)

    InteractantInteraction Details
    GeneCardExternal ID(s)
    SIAH2O432551, 3, ENSP000003224574EBI-1374106,EBI-948141 I2D: score=1 STRING: ENSP00000322457
    MAP3K11Q165843, ENSP000003095974I2D: score=3 STRING: ENSP00000309597
    MAP4K3Q8IVH83, ENSP000002638814I2D: score=3 STRING: ENSP00000263881
    SEMA6AQ9H2E63, ENSP000003455124I2D: score=3 STRING: ENSP00000345512
    SIAH1Q8IUQ43, ENSP000003491564I2D: score=3 STRING: ENSP00000349156
    About this table

    Gene Ontology (GO): 5/6 biological process terms (GO ID links to tree view) (see all 6):    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0006917induction of apoptosis IEA--
    GO:0016567protein ubiquitination IEA--
    GO:0043066negative regulation of apoptotic process IMP--
    GO:0043154negative regulation of cysteine-type endopeptidase activity involved in apoptotic process IMP--
    GO:0046328regulation of JNK cascade IEA--

    SH3RF1 for ontologies           About GeneDecksing



    (Chemical Compounds according to UniProtKB, Enzo Life Sciences, EMD Millipore, Tocris Bioscience HMDB, BitterDB, and/or Novoseek, and Drugs according to DrugBank, Enzo Life Sciences, and/or PharmGKB, with drugs/clinical trials/news search links to CenterWatch)
    About This Section
    Browse Small Molecules at EMD Millipore
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    Browse Tocris compounds for SH3RF1

    1 HMDB Compound for SH3RF1    About this table
    CompoundSynonyms CAS #PubMed Ids
    Guanosine triphosphate5'-GTP (see all 10)86-01-1--
    Search CenterWatch for drugs/clinical trials and news about SH3RF1 / SH3R1 

    (Secondary structures according to fRNAdb,
    GenBank/EMBL/DDBJ Accessions according to
    Unigene (Build 235 Homo sapiens; Mar 10 2013) or GenBank,
    RefSeq according to Entrez Gene,
    DOTS (version 10), and/or AceView, transcript ids from Ensembl with links to UCSC,
    exon structure from GeneLoc, alternative splicing isoforms according to ASD and/or ECgene,
    RNAi Products from EMD Millipore,
    siRNAs from OriGene, QIAGEN, shRNA from OriGene, Sirion Biotech, microRNA from QIAGEN,
    Tagged/untagged cDNA clones from OriGene, SwitchGear Genomics, GenScript, DNA2.0, Vector BioLabs, Primers from OriGene, SABiosciences, and/or QIAGEN )
    About This Section

    REFSEQ mRNAs for SH3RF1 gene: 
    NM_020870.3  

    Unigene Cluster for SH3RF1:

    SH3 domain containing ring finger 1
    Hs.301804  [show with all ESTs]
    Unigene Representative Sequence: BC053671
    5 Ensembl transcripts including schematic representations, and UCSC links where relevant:
    ENST00000284637(uc003isa.1) ENST00000511421 ENST00000508685(uc010irc.1)
    ENST00000502315 ENST00000510806

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    Additional cDNA sequence: 

    AB040927.1 AK021429.1 AK025255.1 AK026726.1 BC033203.1 BC041023.1 BC053671.1 

    7 DOTS entries:

    DT.308292  DT.100748160  DT.100009539  DT.101978498  DT.75138116  DT.75195914  DT.91995916 

    24/106 AceView cDNA sequences (see all 106):

    AL601555 CN478827 BC033203 Z45709 NM_020870 BX093287 BI224417 BM722487 
    AB040927 AA742642 BC041023 CD672041 BG166931 BI223903 BX506138 N46563 
    BM836830 AK025255 CD672040 BE856667 BI962826 BF108450 BI962960 AA648838 

    GeneLoc Exon Structure

    5/7 Alternative Splicing Database (ASD) splice patterns (SP) for SH3RF1 (see all 7)    About this scheme

    ExUns: 1 ^ 2 ^ 3 ^ 4a · 4b · 4c ^ 5 ^ 6a · 6b ^ 7 ^ 8 ^ 9 ^ 10a · 10b ^ 11 ^ 12a · 12b ^ 13 ^ 14a · 14b · 14c ^ 15
    SP1:        -     -                       -                                                                                             
    SP2:                                                                          -                                                         
    SP3:                                                                                                                                    
    SP4:                                                                                                                                    
    SP5:                                                                                                                                    


    ECgene alternative splicing isoforms for SH3RF1

    (RNA expression data according to H-InvDB, NONCODE, miRBase, and RNAdb, Expression images according to data from BioGPS, Illumina Human BodyMap, and CGAP SAGE, Sets of similar genes according to GeneDecks, in vivo and in vitro expression data from LifeMap Discovery™, plus additional links to Genevestigator, and/or SOURCE, and/or BioGPS, and/or UniProtKB,
    PCR Arrays from SABiosciences, Primers from OriGene, SABiosciences, and/or QIAGEN, In Situ Hybridization Assays from Advanced Cell Diagnostics)
    About This Section

    SH3RF1 expression in normal human tissues (normalized intensities)
    See probesets specificity/sensitivity at GeneAnnot
    About this imageBioGPS
    CGAP TAG: TTAATAATTT
    SH3RF1 Expression
    About this image

    SH3RF1 expression in embryonic tissues and stem cells
    Expression by the Database of Embryonic development, Stem cell research, and Regenerative medicine    About this table

    1 LifeMap In Vivo Development Anatomical Compartment/Cell 
    Tissue Anatomical Compartment CellCategory (developmental path)
    HeartAtrioventricular CanalHeart
    Expression: Positive    Negative     Selective marker
    Experimental details: Curated     Microarrays     In-situ hybridization
    Stem Cell Differentiation: 2 LifeMap Cells 
    NameCategory
    PureStem™ mesenchymal progenitor E15 (Embryonic Progenitor Cell)Adipose, Bone, Cartilage
    Definitive endoderm-like cells (A scalable, suspensi...)

    See SH3RF1 Protein Expression from SPIRE MOPED and PaxDB
    Genevestigator expression for SH3RF1

    SOURCE GeneReport for Unigene cluster: Hs.301804
        SABiosciences Custom PCR Arrays for SH3RF1
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    In Situ
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    Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for SH3RF1

    (Orthologs according to 1,2HomoloGene (2older version, for species not in 1newer version), 3euGenes, 4SGD , 5MGI Mar 06 2013, with possible further links to Flybase and/or WormBase, and/or 6Ensembl pan taxonomic compara , Gene Trees according to Ensembl and TreeFam)
    About This Section

    This gene was present in the common ancestor of animals.

    Orthologs for SH3RF1 gene from 5/18 species (see all 18)    About this table
    Organism Taxonomic
    classification
    Gene Description Human
    Similarity
    Orthology
    Type
    Details
    chicken
    (Gallus gallus)
    Aves SH3RF11 SH3 domain containing ring finger 1 76.19(n)
    80.5(a)
      422434  XM_420402.3  XP_420402.2 
    lizard
    (Anolis carolinensis)
    Reptilia SH3RF16
    --
    76(a)
    1 ↔ 1
    GL343216.1(587771-631323)
    African clawed frog
    (Xenopus laevis)
    Amphibia BI449829.12   -- 74.32(n)    BI449829.1 
    zebrafish
    (Danio rerio)
    Actinopterygii sh3rf11 SH3 domain containing ring finger 1 63.62(n)
    66.82(a)
      556523  NM_001045487.2  NP_001038952.2 
    fruit fly
    (Drosophila melanogaster)
    Insecta POSH6
    Plenty of SH3s
    27(a)
    1 → many
    2R(13456232-13459827)


    ENSEMBL Gene Tree for SH3RF1 (if available)
    TreeFam Gene Tree for SH3RF1 (if available) 

    (Paralogs according to 1HomoloGene,
    2Ensembl, and 3SIMAP, Pseudogenes according to 4Pseudogene.org Build 68)
    About This Section
    Paralogs for SH3RF1 gene
    SH3RF32  SH3RF22  SORBS32  SORBS12  SORBS22  SH3D192  
    18 SIMAP similar genes for SH3RF1 using alignment to 4 protein entries:     SH3R1_HUMAN (see all proteins):
    SH3GL2    SH3GL1    GRAPL    ARHGEF7    BRCA1    SH3RF3
    RNF138    TRIM3    TRIM2    TRIM73    ITSN2    RFWD2
    RNF152    TRIM59    RNF135    SH3RF2    BFAR    TRIM5

    SH3RF1 for paralogs           About GeneDecksing



    (SNPs/Variants according to the 1NCBI SNP Database, 2Ensembl, 3PupaSUITE, UniProtKB, and DNA2.0, Linkage Disequilibrium by HapMap, Structural Variations(CNVs/InDels/Inversions) from the Database of Genomic Variants, Mutations from the Human Gene Mutation Database (HGMD) and the Locus Specific Mutation Databases (LSDB), Blood group antigen gene mutations by BGMUT, Resequencing Primers from QIAGEN, Cancer Mutation PCR Arrays and Assays and Copy Number PCR Arrays from SABiosciences)
    About This Section

    10/2875 NCBI SNPs in SH3RF1 are shown (see all 2875    About this table
    Genomic DataTranscription Related DataAllele Frequencies
    SNP IDValidClinical
    significance
    Chr 4 posSequence#AA
    Chg
    TypeMore#Allele
    freq
    PopTotal
    sample
    More
    ----------
    rs68111981,2
    C,A,H--170014982(+) CATGGG/CCCTTT 1 -- ds50014Minor allele frequency- C:0.00NS EA 418
    rs1469561071,2
    --170015066(+) TCATAC/TTATTG 1 -- ds50010--------
    rs1826840121,2
    --170015069(+) TACTAC/TTGGTT 1 -- ds50010--------
    rs1880738071,2
    --170015177(+) GACCTC/TGTGCG 1 -- ds50010--------
    rs1918120971,2
    --170015573(+) GAAAAC/TCCATA 1 -- ut310--------
    rs1824831781,2
    --170015620(+) TTTAAA/CCAACT 1 -- ut310--------
    rs1875226001,2
    --170015631(+) TTATAA/CCAGGA 1 -- ut310--------
    rs1918779501,2
    --170015641(+) AAACTA/CTGAAC 1 -- ut310--------
    rs1454422981,2
    C--170015657(+) ACTTC-/AAATCA 1 -- ut310--------
    rs113878961,2
    C--170015884(+) AAGTA-/TTTTTT 1 -- ut31 trp30--------

    HapMap Linkage Disequilibrium report for SH3RF1 (170015407 - 170192256 bp)
    Structural Variations (Copy Number Variations, Insertions/Deletions, Inversions)
    Database of Genomic Variants (DGV): 1 variation for SH3RF1
         1 Indel: 46554

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    (in which this Gene is Involved, According to MalaCards, OMIM, UniProtKB, the University of Copenhagen DISEASES database, Genatlas, GeneTests, GAD, HuGE Navigator, and/or TGDB.)
    About This Section

    SH3RF1 for disorders           About GeneDecksing

    3 diseases for SH3RF1:    About MalaCards
    benign paroxysmal positional nystagmus    nystagmus    hiv type 1

    1 disease from the University of Copenhagen DISEASES database for SH3RF1:
    Benign paroxysmal positional nystagmus
    Human Genome Epidemiology (HuGE) Navigator: SH3RF1 (1 document)

    Export disorders for SH3RF1 gene to outside databases

    (in PubMed. Associations of this gene to articles via 1Entrez Gene, 2UniProtKB/Swiss-Prot, 3HGNC, 4GAD, 5PharmGKB, 6HMDB, 7DrugBank, 8UniProtKB/TrEMBL, 9 Novoseek, and/or 10fRNAdb)
    About This Section

    PubMed articles for SH3RF1 gene, integrated from 9 sources (see all 27):
    (articles sorted by number of sources associating them with SH3RF1)
        Utopia: connect your pdf to the dynamic
    world of online information

    1. Akt2 negatively regulates assembly of the POSH-MLK-JNK signaling complex. (PubMed id 14504284)1, 2, 9 Figueroa C.... Vojtek A.B. (2003)
    2. POSH stimulates the ubiquitination and the clathrin-i ndependent endocytosis of ROMK1 channels. (PubMed id 19710010)1, 2 Lin D.H....Wang W.H. (2009)
    3. Regulation of the pro-apoptotic scaffolding protein POSH by Akt. (PubMed id 17535800)1, 2 Lyons T.R....Kassenbrock C.K. (2007)
    4. Siah1 interacts with the scaffold protein POSH to promote JNK activation and apoptosis. (PubMed id 16230351)1, 2 Xu Z.... Greene L.A. (2006)
    5. The trans-Golgi network-associated human ubiquitin-protein ligase POSH is essential for HIV type 1 production. (PubMed id 15659549)1, 2 Alroy I.... Reiss Y. (2005)
    6. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PubMed id 14702039)1, 2 Ota T.... Sugano S. (2004)
    7. Prediction of the coding sequences of unidentified human genes. XVII. The complete sequences of 100 new cDNA clones from brain which code for large proteins in vitro. (PubMed id 10819331)1, 2 Nagase T.... Ohara O. (2000)
    8. A new rac target POSH is an SH3-containing scaffold protein involved in the JNK and NF-kappaB signalling pathways. (PubMed id 9482736)1, 3 Tapon N....Hall A. (1998)
    9. Sh3rf2/POSHER protein promotes cell survival by ring-m ediated proteasomal degradation of the c-Jun N-terminal kinase scaffold POSH (Pl enty of SH3s) protein. (PubMed id 22128169)1 Wilhelm M....Greene L.A. (2012)
    10. Possible role of death receptor-mediated apoptosis by the E3 ubiquitin ligases Siah2 and POSH. (PubMed id 21586138)1 Christian P.A....Schwarze S.R. (2011)

    (in PubMed, OMIM, and NCBI Bookshelf)
    About This Section
     ANDOR
    Aliases
    Free Text  

      Query String
    PubMed
    OMIM
    NCBI Bookshelf
      (Note: In FireFox, select the above section and copy using Ctrl-C)

    (According to Entrez Gene, HGNC, AceView, euGenes, Ensembl, miRBase, ECgene, Kegg, and/or H-InvDB)
    About This Section
    Entrez Gene: 57630 HGNC: 17650 AceView: SH3MD2 Ensembl:ENSG00000154447 euGenes: HUgn57630
    ECgene: SH3RF1 H-InvDB: SH3RF1

    (According to HUGE)
    About This Section
    HUGE: KIAA1494

    (According to PharmGKB, ATLAS, HORDE, IMGT, LEIDEN, UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL,
    Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot)
    About This Section
    NameDescription
    PharmGKB entry for SH3RF1 Pharmacogenomics, SNPs, Pathways

    (Patent information from GeneIP,
    Licensable technologies from WIS Yeda, Salk, Tufts,
    IP news from LifeMap Sciences, Inc.)
    About This Section
    Patent Information for SH3RF1 gene:
    Search GeneIP for patents involving SH3RF1

    GeneCards and IP:
    Japan Patent Office Licenses GeneCards     European Patent Office Licenses GeneCards     Improving the IP Search



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    GeneCards Homepage - Last full update: 18 Mar 2013 - Incrementals: 21 Mar 2013 , 15 Apr 2013 , 26 Apr 2013 , 14 May 2013

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