Set Analyses:
Advanced Search

Advanced Search

 
Search By
Section (entire)
for


 
or upload a file of gene symbols


Category   Symbol Source: HGNC EntrezGene Ensembl GeneCards RNA genes CroW21
GIFtS

SH3GL3 Gene

protein-coding   GIFtS: 59
GCID: GC15P084115

SH3-domain GRB2-like 3

 Explore 9 diseases affiliated with
SH3GL3 via our new
 Human Malady Compendium 
Biological research products
for SH3GL3
    

(According to 1HGNC, 2Entrez Gene,
3UniProtKB/Swiss-Prot, 4UniProtKB/TrEMBL, 5OMIM, 6GeneLoc, 7Ensembl, 8DME, 9miRBase, and/or 10fRNAdb)
About This Section

This gene clusters with an RNA gene
Subcategory (RNA class): lncRNA

Quality score for the ORGUL clustered with this gene is 3

Aliases
SH3-Domain GRB2-Like 31 2     SH3 Domain Protein 2C2 3
CNSA31 2 3     SH3 Domain-Containing GRB2-Like Protein 32 3
EEN-B21 2 3     EEN-2B-L32
SH3D2C1 2 3     Endophilin-33
HsT193711 2     Endophilin-A31
SH3P131 2     Endophilin-33

External Ids:    HGNC: 108321   Entrez Gene: 64572   Ensembl: ENSG000001406007   OMIM: 6033625   UniProtKB: Q999633   
ORGUL members:         
NONCODE:n407336    

Export aliases for SH3GL3 gene to outside databases

Previous GC identifers: GC15P080042 GC15P077149 GC15P081694 GC15P081836 GC15P081907 GC15P060379


(According to Entrez Gene, Tocris Bioscience, Wikipedia's Gene Wiki, PharmGKB,
UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL)
About This Section

UniProtKB/Swiss-Prot: SH3G3_HUMAN, Q99963
Function: Implicated in endocytosis. May recruit other proteins to membranes with high curvature (By similarity)

Gene Wiki entry for SH3GL3


(According to GeneLoc and/or HGNC, and/or
Entrez Gene (NCBI build 37),
and/or miRBase,
Genomic Views according to UCSC (hg19) and Ensembl (release 69), Regulatory elements and Epigenetics data according to QIAGEN, SABiosciences, and/or SwitchGear Genomics)
About This Section
RefSeq DNA sequence:
NC_000015.9  NC_018926.1  NT_077661.3  
Regulatory elements:
   SABiosciences Regulatory transcription factor binding sites in the SH3GL3 gene promoter:
         AhR   Sox5   AML1a   YY1   Arnt   AREB6   Nkx6-1   Ik-2   HOXA5   
         Other transcription factors

SwitchGear Promoter luciferase reporter plasmidSH3GL3 promoter sequence
   Search SABiosciences Chromatin IP Primers for SH3GL3

Epigenetics:
QIAGEN PyroMark CpG Assay predesigned Pyrosequencing DNA Methylation assays in human, mouse, rat SH3GL3


Genomic Location:
Genomic View: UCSC Golden Path with GeneCards custom track

Entrez Gene cytogenetic band: 15q24   Ensembl cytogenetic band:  15q25.2   HGNC cytogenetic band: 15q24

SH3GL3 Gene in genomic location: bands according to Ensembl, locations according to (and/or Entrez Gene and/or Ensembl if different)
SH3GL3 gene location

GeneLoc information about chromosome 15         GeneLoc Exon Structure

GeneLoc location for GC15P084115:  view genomic region     (about GC identifiers)

Start:
84,115,980 bp from pter      End:
84,287,495 bp from pter
Size:
171,516 bases      Orientation:
plus strand

(According to 1UniProtKB, HORDE, neXtProt, Ensembl, and/or Reactome, Modification sites according to 2PhosphoSitePlus, Specific Peptides from DME, Protein expression images according to data from SPIRE MOPED and PaxDb, RefSeq according to NCBI, PDB rendering according to OCA and/or Proteopedia, Recombinant Proteins from EMD Millipore, R&D Systems, GenScript, Enzo Life Sciences, OriGene, Novus Biologicals, Sino Biological, ProSpec, and/or Uscn,
Biochemical Assays by EMD Millipore, R&D Systems, OriGene, GenScript, Cell Signaling Technology, Enzo Life Sciences, and/or Uscn, Ontologies according to Gene Ontology Consortium 01 Mar 2013 and Entrez Gene, Antibodies by EMD Millipore, R&D Systems, GenScript, Cell Signaling Technology, OriGene, Novus Biologicals, Thermo Fisher Scientific, Abcam, and/or Uscn)
About This Section

UniProtKB/Swiss-Prot: SH3G3_HUMAN, Q99963 (See protein sequence)
Recommended Name: Endophilin-A3  
Size: 347 amino acids; 39285 Da
Subunit: Interacts with ARC (By similarity). Interacts with DNM1, SGIP1 and SYNJ1. Interacts with the huntingtin exon 1
protein (HDEX1P) containing a glutamine repeat in the pathological range and promotes formation of insoluble
polyglutamine-containing aggregates in vivo. Interacts with DYDC1. Interacts with FASLG. Interacts with ATX2.
Interacts with BIN2
Subcellular location: Cytoplasm (By similarity). Early endosome membrane; Peripheral membrane protein (By similarity).
Note=Associated with postsynaptic endosomes in hippocampal neurons. Associated with presynaptic endosomes in olfactory
neurons (By similarity)
2 PDB 3D structures from and Proteopedia for SH3GL3:
2EW3 (3D)        2Z0V (3D)    
Secondary accessions: O43553 O43554
Alternative splicing: 4 isoforms:  Q99963-1   Q99963-2   Q99963-3   Q99963-4   

Explore the universe of human proteins at neXtProt for SH3GL3: NX_Q99963

Post-translational modifications:

  • View modification sites using PhosphoSitePlus2
  • View neXtProt modification sites for NX_Q99963

  • SH3GL3 Protein expression data from MOPED and PaxDb:    About this image 
    Estimated protein expression log10 (pmol).

    REFSEQ proteins: NP_003018.3  
    ENSEMBL proteins: 
     ENSP00000391372   ENSP00000456249   ENSP00000320092   ENSP00000439239   ENSP00000397871  

    Human Recombinant Protein Products: 
    Browse Purified and Recombinant Proteins at EMD Millipore
    Browse R&D Systems for human recombinant proteins
    Browse recombinant and purified proteins available from Enzo Life Sciences
    OriGene Purified Protein: SH3GL3
    OriGene Protein Over-expression Lysate: SH3GL3
    OriGene Custom Protein Services for SH3GL3 
    GenScript Custom Purified and Recombinant Proteins Services for SH3GL3
    Novus Biologicals SH3GL3 Protein
    Novus Biologicals SH3GL3 Lysates
    Browse Sino Biological Recombinant Proteins
    Browse ProSpec Recombinant Proteins
    Uscn Proteins for SH3GL3

    Gene Ontology (GO): 2 cellular component terms (GO ID links to tree view):    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0005737cytoplasm ----
    GO:0031901early endosome membrane IEA--


    SH3GL3 for ontologies           About GeneDecksing



    SH3GL3 Antibody Products: 
    Browse EMD Millipore's Extensive Line of Mono- and Polyclonal Antibodies
    Browse R&D Systems for Antibodies
    Browse OriGene Antibodies
    OriGene Custom Antibody Services for SH3GL3 
    GenScript Custom Superior Antibodies Services for SH3GL3
    Novus Biologicals SH3GL3 Antibodies
    Search for Antibodies for SH3GL3 at Abcam  
    Uscn Antibodies for SH3GL3
    Search ThermoFisher Antibodies for SH3GL3

    Assay Products for SH3GL3: 
    Browse Kits and Assays available from EMD Millipore
    OriGene Custom Immunoassay Development
    Browse OriGene Fluorogenic Cell Assay Kits
    Browse R&D Systems for biochemical assays
    GenScript Custom Assay Services for SH3GL3
    Browse Enzo Life Sciences for kits & assays
    Uscn ELISAs and CLIAs for SH3GL3


    (According to InterPro, ProtoNet, UniProtKB, and/or BLOCKS, Sets of similar genes according to GeneDecks)
    About This Section

    SH3GL3 for domains           About GeneDecksing

    2 InterPro domains/families:
     IPR001452 SH3_domain
     IPR004148 BAR_dom

    Graphical View of Domain Structure for InterPro Entry Q99963

    ProtoNet protein and cluster: Q99963

    1 Blocks protein family: IPB001452 SH3 domain signature

    UniProtKB/Swiss-Prot: SH3G3_HUMAN, Q99963
    Domain: An N-terminal amphipathic helix, the BAR domain and a second amphipathic helix inserted into helix 1 of the BAR
    domain (N-BAR domain) induce membrane curvature and bind curved membranes (By similarity)
    Similarity: Belongs to the endophilin family
    Similarity: Contains 1 BAR domain
    Similarity: Contains 1 SH3 domain


    (According to 1UniProtKB, Genatlas, LifeMap Discovery™, IUBMB, and/or 2DME, Human phenotypes from GenomeRNAi, Animal models from MGI Mar 06 2013,
    bound targets from SABiosciences, miRNA Gene Targets from miRTarBase shRNA from OriGene, RNAi from EMD Millipore, siRNAs from OriGene, QIAGEN, microRNA from QIAGEN, Gene Editing from DNA2.0, Clones from EMD Millipore, OriGene, SwitchGear Genomics, GenScript, Sino Biological, DNA2.0, and Vector BioLabs, Cell Lines from GenScript, LifeMap BioReagents, In Situ Hybridization Assays from Advanced Cell Diagnostics, Ontologies according to Gene Ontology Consortium 01 Mar 2013 via Entrez Gene.)
    About This Section

    Function Summary:

         UniProtKB/Swiss-Prot: SH3G3_HUMAN, Q99963
    Function: Implicated in endocytosis. May recruit other proteins to membranes with high curvature (By similarity)

         Genatlas biochemistry entry for SH3GL3:
    Src-homology 3 domain GRB2-like gene 3,expressed in brain and testis

    miRNA
    Products:
        
    OriGene 3'-UTR Clone: SH3GL3
    Browse MicroRNA Expression Plasmids
    QIAGEN Custom miScript Target Protector blocks miRNA-binding site of human, mouse, rat SH3GL3
    Search QIAGEN for miScript miRNA Assays for microRNAs that regulate SH3GL3
    SwitchGear 3'UTR luciferase reporter plasmidSH3GL3 3' UTR sequence
    Inhib. RNA
    Products:
        
    Browse for Gene Knock-down Tools from EMD Millipore
    OriGene 29mer shRNA kits in GFP-retroviral vector in human, mouse, rat for SH3GL3 (see all 7)
    OriGene shRNA RFP: SH3GL3
    OriGene siRNA: SH3GL3
    QIAGEN FlexiTube/FlexiPlate siRNA for gene silencing in human, mouse, rat SH3GL3

    Gene Editing
    Products:
    DNA2.0 Custom Protein Engineering Service for SH3GL3

    Clone
    Products:
         
    Browse Clones for the Expression of Recombinant Proteins Available from EMD Millipore
    OriGene Myc/DDK tagged cDNA clones in CMV expression vector in human, mouse, rat for SH3GL3 (see all 3)
    OriGene untagged cDNA clones in CMV expression vector in human, mouse, rat for SH3GL3 (see all 2)
    OriGene custom cloning services – gene synthesis, subcloning, mutagenesis, variant library, vector shuttling 
    GenScript: all cDNA clones in your preferred vector: SH3GL3 (NM_003027)
    Browse Sino Biological Human cDNA Clones
    DNA2.0 Custom Codon Optimized Gene Synthesis Service for SH3GL3
    Vector BioLabs ready-to-use adenovirus/AAV for human, mouse, rat SH3GL3 

    Cell Line
    Products:
         
    GenScript Custom overexpressing Cell Line Services for SH3GL3
    Search LifeMap BioReagents cell lines for SH3GL3

    In Situ Assay
    Products:
       

     
    Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for SH3GL3

    Gene Ontology (GO): 4 molecular function terms (GO ID links to tree view):    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0005515protein binding IPI16713569
    GO:0008289lipid binding IEA--
    GO:0019904protein domain specific binding IEA--
    GO:0042802identical protein binding IPI16115810


    SH3GL3 for ontologies           About GeneDecksing



    (Pathways according to EMD Millipore, R&D Systems, Cell Signaling Technology, KEGG, PharmGKB, BioSystems, Reactome, Tocris Bioscience, GeneGo (Thomson Reuters), QIAGEN, and/or UniProtKB, Sets of similar genes according to GeneDecks, Interaction Networks according to SABiosciences, and/or STRING, Interactions according to 1UniProtKB, 2MINT, 3I2D, and/or 4STRING, with links to IntAct and Ensembl, Ontologies according to Gene Ontology Consortium 01 Mar 2013 via Entrez Gene).
    About This Section

    Unified GeneCards pathways  About this table 
    See pathways by source

    Super-pathwaycontained gene-specific pathways
    1Endocytosis
    Endocytosis1.00
    2EGFR1 Signaling Pathway
    EGFR1 Signaling Pathway1.00

    Pathway sources
    See GeneCards unified pathways
    Show all pathways


    1 BioSystems Pathway for SH3GL3 
        EGFR1 Signaling Pathway


    1         Kegg Pathway  (Kegg details for SH3GL3):
        Endocytosis


    SH3GL3 for pathways           About GeneDecksing

    Interactions:

        SABiosciences Gene Network CentralTM Interacting Genes and Proteins Network for SH3GL3

    STRING Interaction Network Preview (showing 5 interactants - click image to see 25)

    5/90 Interacting proteins for SH3GL3 (Q999631, 2, 3 ENSP000003913724) via UniProtKB, MINT, STRING, and/or I2D (see all 90)
    InteractantInteraction Details
    GeneCardExternal ID(s)
    HTTP428581, 2, 3, ENSP000003471844EBI-473910,EBI-466029 MINT-7101514 MINT-7101421 MINT-3978011 MINT-7101561 MINT-3978450 MINT-7101535 MINT-7101548 MINT-3978571 I2D: score=5 STRING: ENSP00000347184
    ATXN2Q997001, 2, 3, ENSP000003668434EBI-473910,EBI-697691 MINT-7310089 MINT-2863161 MINT-2863142 MINT-7310056 MINT-7310016 MINT-7310071 I2D: score=3 STRING: ENSP00000366843
    SH3GL1Q999611, 2, 3, ENSP000002698864EBI-473910,EBI-697911 MINT-8270363 I2D: score=5 STRING: ENSP00000269886
    SH3KBP1Q96B972, 3, ENSP000003809214MINT-15312 MINT-15311 MINT-15313 MINT-8270671 I2D: score=4 STRING: ENSP00000380921
    SNX24Q9Y3432, 3, ENSP000002613694MINT-65814 I2D: score=4 STRING: ENSP00000261369
    About this table

    Gene Ontology (GO): 3 biological process terms (GO ID links to tree view):    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0006897endocytosis IEA--
    GO:0007165signal transduction TAS9169142
    GO:0007417central nervous system development TAS9169142


    SH3GL3 for ontologies           About GeneDecksing



    (Chemical Compounds according to UniProtKB, Enzo Life Sciences, EMD Millipore, Tocris Bioscience HMDB, BitterDB, and/or Novoseek, and Drugs according to DrugBank, Enzo Life Sciences, and/or PharmGKB, with drugs/clinical trials/news search links to CenterWatch)
    About This Section

    SH3GL3 for compounds           About GeneDecksing

    Browse Small Molecules at EMD Millipore
    Browse drugs & compounds from Enzo Life Sciences

    Browse Tocris compounds for SH3GL3
    1 Novoseek chemical compound relationship for SH3GL3 gene    About this table
    Compound   -log (P-Val)   Hits   PubMed IDs for Articles with Shared Sentences (# sentences)
    glutamine 44 2 14715959 (1), 9809064 (1)

    Search CenterWatch for drugs/clinical trials and news about SH3GL3 / SH3G3 

    (Secondary structures according to fRNAdb,
    GenBank/EMBL/DDBJ Accessions according to
    Unigene (Build 235 Homo sapiens; Mar 10 2013) or GenBank,
    RefSeq according to Entrez Gene,
    DOTS (version 10), and/or AceView, transcript ids from Ensembl with links to UCSC,
    exon structure from GeneLoc, alternative splicing isoforms according to ASD and/or ECgene,
    RNAi Products from EMD Millipore,
    siRNAs from OriGene, QIAGEN, shRNA from OriGene, microRNA from QIAGEN,
    Tagged/untagged cDNA clones from OriGene, SwitchGear Genomics, GenScript, DNA2.0, Vector BioLabs, Primers from OriGene, SABiosciences, and/or QIAGEN )
    About This Section

    REFSEQ mRNAs for SH3GL3 gene: 
    NM_003027.3  

    Unigene Clusters for SH3GL3:

    SH3-domain GRB2-like 3
    Hs.270055  [show with all ESTs], Hs.666365
    Unigene Representative Sequences: NM_003027, AF036272
    8 Ensembl transcripts including schematic representations, and UCSC links where relevant:
    ENST00000492099(uc010bms.2) ENST00000427482(uc010uot.1 uc002bjw.3 uc002bjx.3)
    ENST00000563901 ENST00000324537(uc002bju.3) ENST00000564054 ENST00000467735
    ENST00000535412(uc002bjv.3) ENST00000434347

    miRNA
    Products:
         
    OriGene 3'-UTR Clone: SH3GL3
    Browse OriGene MicroRNA Expression Plasmids
    QIAGEN Custom miScript Target Protector blocks miRNA-binding site of human, mouse, rat SH3GL3
    Search QIAGEN for miScript miRNA Assays for microRNAs that regulate SH3GL3
    SwitchGear 3'UTR luciferase reporter plasmidSH3GL3 3' UTR sequence
    Inhib. RNA
    Products:
         
    Browse for Gene Knock-down Tools from EMD Millipore
    OriGene 29mer shRNA kits in GFP-retroviral vector in human, mouse, rat for SH3GL3 (see all 7)
    OriGene shRNA RFP: SH3GL3
    OriGene siRNA: SH3GL3
    QIAGEN FlexiTube/FlexiPlate siRNA for gene silencing in human, mouse, rat SH3GL3
    Clone
    Products:
         
    OriGene Myc/DDK tagged cDNA clones in CMV expression vector in human, mouse, rat for SH3GL3 (see all 3)
    OriGene untagged cDNA clones in CMV expression vector in human, mouse, rat for SH3GL3 (see all 2)
    OriGene custom cloning services – gene synthesis, subcloning, mutagenesis, variant library, vector shuttling 
    GenScript: all cDNA clones in your preferred vector: SH3GL3 (NM_003027)
    DNA2.0 Custom Codon Optimized Gene Synthesis Service for SH3GL3
    Vector BioLabs ready-to-use adenovirus/AAV for human, mouse, rat SH3GL3 
    Primer
    Products:
        
    OriGene genome-wide validated SYBR primer pairs in human, mouse, rat for SH3GL3
    Browse OriGene validated miRNA SYBR primer pairs
    SABiosciences RT2 qPCR Primer Assay in human, mouse, rat SH3GL3
      QIAGEN QuantiTect SYBR Green Assays in human, mouse, rat SH3GL3
      QIAGEN QuantiFast Probe-based Assays in human, mouse, rat SH3GL3

    Additional cDNA sequence: AF036272.1 

    8 DOTS entries:

    DT.91742599  DT.455415  DT.95375812  DT.100749469  DT.431276  DT.100749468  DT.121066402  DT.75176880 

    24/52 AceView cDNA sequences (see all 52):

    AF036271 BC035598 BX108620 NM_003027 AI217188 BP367004 CF455689 AA400405 
    F10038 AF036270 BI597342 BI545363 BI599045 AA432226 BI668418 AI336437 
    BI547720 AI333036 AF036269 BC042864 X99664 AL109775 T05714 F12421 

    GeneLoc Exon Structure

    5 Alternative Splicing Database (ASD) splice patterns (SP) for SH3GL3    About this scheme

    ExUns: 1a · 1b · 1c · 1d ^ 2 ^ 3 ^ 4 ^ 5 ^ 6a · 6b ^ 7a · 7b ^ 8 ^ 9 ^ 10 ^ 11 ^ 12 ^ 13a · 13b
    SP1:                                                        -                                         -               
    SP2:                          -     -     -                 -                                                         
    SP3:                          -     -     -                 -                                         -               
    SP4:                          -     -     -                 -     -                                   -               
    SP5:                          -     -     -                                                                           


    ECgene alternative splicing isoforms for SH3GL3

    (RNA expression data according to H-InvDB, NONCODE, miRBase, and RNAdb, Expression images according to data from BioGPS, Illumina Human BodyMap, and CGAP SAGE, Sets of similar genes according to GeneDecks, in vivo and in vitro expression data from LifeMap Discovery™, plus additional links to Genevestigator, and/or SOURCE, and/or BioGPS, and/or UniProtKB,
    PCR Arrays from SABiosciences, Primers from OriGene, SABiosciences, and/or QIAGEN, In Situ Hybridization Assays from Advanced Cell Diagnostics)
    About This Section

    SH3GL3 expression in normal human tissues (normalized intensities)
    See probesets specificity/sensitivity at GeneAnnot
    About this imageBioGPS
    CGAP TAG: CATTTTGGGG

    Microarray
    RNAseq (Illumina Body Map)
    (100×FPKM)½
    SAGE (Serial Analysis of Gene Expression)

    About this image

    SH3GL3 expression in embryonic tissues and stem cells
    Expression by the Database of Embryonic development, Stem cell research, and Regenerative medicine    About this table
    Stem Cell Differentiation: 1 LifeMap Cell 
    NameCategory
    Ventral/hypothalamic-like neurons (Generation of midbra...)
    Expression: Positive    Negative     Selective marker
    Experimental details: Curated     Microarrays     In-situ hybridization

    See SH3GL3 Protein Expression from SPIRE MOPED and PaxDB
    Genevestigator expression for SH3GL3

    SOURCE GeneReport for Unigene clusters: Hs.270055 Hs.666365

    UniProtKB/Swiss-Prot: SH3G3_HUMAN, Q99963
    Tissue specificity: Brain and testis

        SABiosciences Custom PCR Arrays for SH3GL3
    Primer
    Products:
    OriGene genome-wide validated SYBR primer pairs in human, mouse, rat for SH3GL3
    Browse OriGene validated miRNA SYBR primer pairs
    SABiosciences RT2 qPCR Primer Assay in human, mouse, rat SH3GL3
    QIAGEN QuantiTect SYBR Green Assays in human, mouse, rat SH3GL3
    QIAGEN QuantiFast Probe-based Assays in human, mouse, rat SH3GL3
    In Situ
    Assay Products:
     

     
    Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for SH3GL3

    (Orthologs according to 1,2HomoloGene (2older version, for species not in 1newer version), 3euGenes, 4SGD , 5MGI Mar 06 2013, with possible further links to Flybase and/or WormBase, and/or 6Ensembl pan taxonomic compara , Gene Trees according to Ensembl and TreeFam)
    About This Section

    This gene was present in the common ancestor of animals.

    Orthologs for SH3GL3 gene from 5/21 species (see all 21)    About this table
    Organism Taxonomic
    classification
    Gene Description Human
    Similarity
    Orthology
    Type
    Details
    chicken
    (Gallus gallus)
    Aves SH3GL31 SH3-domain GRB2-like 3 78.67(n)
    83.86(a)
      395201  NM_204528.1  NP_989859.1 
    lizard
    (Anolis carolinensis)
    Reptilia SH3GL36
    --
    65(a)
    1 ↔ 1
    GL344365.1(514-5528)
    zebrafish
    (Danio rerio)
    Actinopterygii sh3gl3a1 SH3-domain GRB2-like 3a 71.95(n)
    78.39(a)
      571626  NM_001081691.2  NP_001075160.1 
    fruit fly
    (Drosophila melanogaster)
    Insecta endoA1 , 3 synaptic vesicle endocytosis
    lysophosphatidic more3
    endophilin A1
    49(a)3
    56.98(n)1
    55.23(a)1
      91D43
    422651  NM_138767.21  NP_620122.21 
    worm
    (Caenorhabditis elegans)
    Secernentea T04D1.33   -- 50(a)   I(4675134-4676809)   --


    ENSEMBL Gene Tree for SH3GL3 (if available)
    TreeFam Gene Tree for SH3GL3 (if available) 

    (Paralogs according to 1HomoloGene,
    2Ensembl, and 3SIMAP, Pseudogenes according to 4Pseudogene.org Build 68)
    About This Section
    Paralogs for SH3GL3 gene
    SH3GL12  SH3GLB12  SH3GL22  SH3GLB22  
    3 SIMAP similar genes for SH3GL3 using alignment to 3 protein entries:     SH3G3_HUMAN (see all proteins):
    SH3GL2    DKFZp686B23205    SH3GL1

    SH3GL3 for paralogs           About GeneDecksing



    (SNPs/Variants according to the 1NCBI SNP Database, 2Ensembl, 3PupaSUITE, UniProtKB, and DNA2.0, Linkage Disequilibrium by HapMap, Structural Variations(CNVs/InDels/Inversions) from the Database of Genomic Variants, Mutations from the Human Gene Mutation Database (HGMD) and the Locus Specific Mutation Databases (LSDB), Blood group antigen gene mutations by BGMUT, Resequencing Primers from QIAGEN, Cancer Mutation PCR Arrays and Assays and Copy Number PCR Arrays from SABiosciences)
    About This Section

    10/2553 NCBI SNPs in SH3GL3 are shown (see all 2553    About this table
    Genomic DataTranscription Related DataAllele Frequencies
    SNP IDValidClinical
    significance
    Chr 15 posSequence#AA
    Chg
    TypeMore#Allele
    freq
    PopTotal
    sample
    More
    ----------
    rs1411645701,2
    --84114207(+) GTAGCA/GATGAT 2 -- us2k10--------
    rs1923046761,2
    --84114267(+) AATAAA/GTCTAT 2 -- us2k10--------
    rs727583911,2
    C,F,--84114419(+) AGAAAC/TTTGAA 2 -- us2k12Minor allele frequency- T:0.11WA NA 238
    rs1849992241,2
    --84114428(+) AATGTA/GCTAAC 2 -- us2k10--------
    rs1871154771,2
    --84114429(+) ATGTAC/GTAACG 2 -- us2k10--------
    rs1922357291,2
    --84114455(+) CCAATA/TAACTG 2 -- us2k10--------
    rs1844342341,2
    --84114503(+) AGAGCC/TGGATT 2 -- us2k10--------
    rs1116937961,2
    --84114669(+) GCCTGC/TGGTGA 2 -- us2k11Minor allele frequency- T:0.50CSA 2
    rs20551441,2
    C,A,H,--84114698(-) ACAGTC/TCAAAT 2 -- us2k117Minor allele frequency- T:0.00NS EA NA WA CSA 792
    rs1451430911,2
    --84114803(+) AAGCCC/TACAAC 2 -- us2k10--------

    HapMap Linkage Disequilibrium report for SH3GL3 (84115980 - 84287495 bp)
    Structural Variations (Copy Number Variations, Insertions/Deletions, Inversions)
    Database of Genomic Variants (DGV): 2 variations for SH3GL3
         2 Indels: 41658 61470

    SABiosciences Cancer Mutation PCR Assays
    QIAGEN SeqTarget long-range PCR primers in human, mouse, rat for resequencing SH3GL3
    DNA2.0 Custom Variant and Variant Library Synthesis for SH3GL3

    (in which this Gene is Involved, According to MalaCards, OMIM, UniProtKB, the University of Copenhagen DISEASES database, Novoseek, Genatlas, GeneTests, GAD, HuGE Navigator, and/or TGDB.)
    About This Section

    SH3GL3 for disorders           About GeneDecksing

    OMIM gene information: 603362    OMIM disorders: --

    9 diseases for SH3GL3:    About MalaCards
    wiskott-aldrich syndrome    oral cavity cancer    cerebellar ataxia    huntington's disease
    gout    ataxia    twinning    leukemia
    neuronitis

    1 Novoseek disease relationship for SH3GL3 gene    About this table

    Disease   -log (P-Val)   Hits   PubMed IDs for Articles with Shared Sentences (# sentences)
    huntington disease 65.7 1 9878254 (1)

    Human Genome Epidemiology (HuGE) Navigator: SH3GL3 (2 documents)

    Export disorders for SH3GL3 gene to outside databases

    (in PubMed. Associations of this gene to articles via 1Entrez Gene, 2UniProtKB/Swiss-Prot, 3HGNC, 4GAD, 5PharmGKB, 6HMDB, 7DrugBank, 8UniProtKB/TrEMBL, 9 Novoseek, and/or 10fRNAdb)
    About This Section

    PubMed articles for SH3GL3 gene, integrated from 9 sources (see all 40):
    (articles sorted by number of sources associating them with SH3GL3)
        Utopia: connect your pdf to the dynamic
    world of online information

    1. A novel SH3-containing human gene family preferentially expressed in the central nervous system. (PubMed id 9169142)1, 2, 3 Giachino C....Migone N. (1997)
    2. SH3GL3 associates with the Huntingtin exon 1 protein and promotes the formation of polygln-containing protein aggregates. (PubMed id 9809064)1, 2, 9 Sittler A.... Wanker E.E. (1998)
    3. Identification of SH3 domain interaction partners of human FasL (CD178) by phage display screening. (PubMed id 19807924)1, 2 Voss M....Janssen O. (2009)
    4. Ataxin-2 associates with the endocytosis complex and affects EGF receptor trafficking. (PubMed id 18602463)1, 2 Nonis D....Auburger G. (2008)
    5. Src homology 3-domain growth factor receptor-bound 2-like (endophilin) interacting protein 1, a novel neuronal protein that regulates energy balance. (PubMed id 15919751)1, 2 Trevaskis J.... Collier G.R. (2005)
    6. The SH3 domains of endophilin and amphiphysin bind to the proline- rich region of synaptojanin 1 at distinct sites that display an unconventional binding specificity. (PubMed id 10542231)1, 2 Cestra G.... Cesareni G. (1999)
    7. Expression and protein-binding studies of the EEN gene family, new interacting partners for dynamin, synaptojanin and huntingtin proteins. (PubMed id 10816441)1, 9 So C.W....Chan L.C. (2000)
    8. Interaction of SH3P13 and DYDC1 protein: a germ cell component that regulates acrosome biogenesis during spermiogenesis. (PubMed id 19545932)2, 9 Li S.... Wang L. (2009)
    9. LRRK2 controls an EndoA phosphorylation cycle in synap tic endocytosis. (PubMed id 22998870)1 Matta S....Verstreken P. (2012)
    10. Bin2 is a membrane sculpting N-BAR protein that influences leucocyte podosomes, motility and phagocytosis. (PubMed id 23285027)2 Sanchez-Barrena M.J.... McMahon H.T. (2012)

    (in PubMed, OMIM, and NCBI Bookshelf)
    About This Section
     ANDOR
    Aliases
    Disorders
    Free Text  

      Query String
    PubMed
    OMIM
    NCBI Bookshelf
      (Note: In FireFox, select the above section and copy using Ctrl-C)

    (According to Entrez Gene, HGNC, AceView, euGenes, Ensembl, miRBase, ECgene, Kegg, and/or H-InvDB)
    About This Section
    Entrez Gene: 6457 HGNC: 10832 AceView: SH3GL3 Ensembl:ENSG00000140600 euGenes: HUgn6457
    ECgene: SH3GL3 Kegg: 6457 H-InvDB: SH3GL3

    (According to HUGE)
    About This Section
      --

    (According to PharmGKB, ATLAS, HORDE, IMGT, LEIDEN, UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL,
    Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot)
    About This Section
    NameDescription
    PharmGKB entry for SH3GL3 Pharmacogenomics, SNPs, Pathways

    (Patent information from GeneIP,
    Licensable technologies from WIS Yeda, Salk, Tufts,
    IP news from LifeMap Sciences, Inc.)
    About This Section
    Patent Information for SH3GL3 gene:
    Search GeneIP for patents involving SH3GL3

    GeneCards and IP:
    Japan Patent Office Licenses GeneCards     European Patent Office Licenses GeneCards     Improving the IP Search



    (Antibodies, recombinant proteins, and assays from EMD Millipore, R&D Systems, OriGene, QIAGEN, GenScript, Cell Signaling Technology, SABiosciences, Novus Biologicals, Sino Biological, Enzo Life Sciences, Abcam, ProSpec, Uscn, Thermo Fisher Scientific, Gene Editing from DNA2.0, Clones from EMD Millipore, OriGene, GenScript, Sino Biological, DNA2.0, SwitchGear Genomics, Vector BioLabs, Cell lines from GenScript and LifeMap BioReagents, PCR Arrays from SABiosciences, Drugs and/or compounds from EMD Millipore, Tocris Bioscience, and/or Enzo Life Sciences),
    In Situ Hybridization Assays from
    Advanced Cell Diagnostics
    About This Section

     
     EMD Millipore Custom Antibody & Bulk Services
     EMD Millipore Preclinical / Clinical Development Services
     EMD Millipore Immunoassay Services
     EMD Millipore Target Screening & Profiling Services

      
     Browse Antibodies   Browse Cell Culture Products  
     Browse ELISAs   Browse Flow Cytometry Kits  
     Browse Primer Pairs   Browse Kinase Activity Assays/Reagents  
     Browse ELISpot Kits/Development Modules   Browse TFB/Immunoprecipitation Assays  
     Browse Apoptosis Detection Kits/Reagents   Browse Ubiquitin Proteasome Pathway (UPP) Assay Kits/Reagents  
     Browse DNA Damage/Repair Kits/Reagents   Browse Multiplex/Array Assay Kits/Reagents  
     Browse Cell Selection/Detection Kits/Reagents   Browse Secondary Antibodies/Controls/Staining Reagents  
     Browse Phosphatase Activity Assays/Reagents   Browse Recombinant/Natural Proteins  
     Browse OriGene Antibodies   OriGene shRNA RFP for SH3GL3  
     OriGene 29mer shRNA kits in GFP-retroviral vector in human, mouse, rat for SH3GL3   OriGene genome-wide validated SYBR primer pairs in human, mouse, rat for SH3GL3  
     OriGene Protein Over-expression Lysate for SH3GL3   Browse OriGene Fluorogenic Cell Assay Kits  
     OriGene siRNA for SH3GL3   OriGene 3'-UTR Clone for SH3GL3  
     OriGene untagged cDNA clones in CMV expression vector in human, mouse, rat for SH3GL3   OriGene Myc/DDK tagged cDNA clones in CMV expression vector in human, mouse, rat for SH3GL3  
     Browse OriGene GFP tagged cDNA clones in CMV expression vector   Browse OriGene MicroRNA Expression Plasmids  
     Browse OriGene basic RS shRNAs   Browse OriGene validated miRNA SYBR primer pairs  
     OriGene Purified Protein for SH3GL3   OriGene custom cloning services - gene synthesis, subcloning, mutagenesis, variant library, vector shuttling  
     OriGene Custom Antibody Services for SH3GL3   OriGene Custom Protein Services for SH3GL3  
     OriGene Custom Immunoassay Development  

     
     
     QIAGEN Custom miScript Target Protector blocks miRNA-binding site of in human, mouse, rat SH3GL3
     QIAGEN SeqTarget long-range PCR primers in human, mouse, rat for resequencing SH3GL3
     QIAGEN PyroMark CpG Assay predesigned Pyrosequencing DNA Methylation assays in human, mouse, rat SH3GL3
     QIAGEN FlexiTube/FlexiPlate siRNA for gene silencing in human, mouse, rat SH3GL3
     QIAGEN QuantiFast Probe-based Assays in human, mouse, rat SH3GL3
     QIAGEN QuantiTect SYBR Green Assays in human, mouse, rat SH3GL3
     GenScript Custom Purified and Recombinant Proteins Services for SH3GL3 GenScript cDNA clones with any tag delivered in your preferred vector for SH3GL3
     GenScript Custom Assay Services for SH3GL3 GenScript Custom Superior Antibodies Services for SH3GL3
     GenScript Custom overexpressing Cell Line Services for SH3GL3 CloneReady with Over 120,000 Genes
     Gene Synthesis: Any Gene in Any Vector Vector-based siRNA and miRNA, Ready for Transfection
     Gene Mutant Library, Variants up to 10^11 Plasmid Preparation
     Custom Peptide Services
     Search for Antibodies & Assays

     Regulatory tfbs in SH3GL3 promoter
     Search Chromatin IP Primers for SH3GL3
     RT2 qPCR Primer Assay in human, mouse, rat SH3GL3
     GNC Network for SH3GL3
     SABiosciences Custom PCR Arrays for SH3GL3
     Search Tocris compounds for SH3GL3
     Browse Sino Biological Proteins and Antibodies
     Browse Sino Biological cDNA Clones
     Antibodies/Proteins Production Services
     Rabbit Monoclonal Antibody Platform
     Bulk Purchasing
     Search www.enzolifesciences.com for proteins, assays, substrates, inhibitors & antibodies
     Novus Tissue Slides
     SH3GL3 antibodies
     SH3GL3 proteins
     SH3GL3 lysates
     Search for Antibodies for SH3GL3 at Abcam
     See all of Abcam's Antibodies, Kits and Proteins for SH3GL3
     Custom Antibody / Protein Production Service
     Bulk Purchasing
     Advantages of Rabbit Monoclonal antibodies
     Abcam protocols and scientific support
     Browse ProSpec Recombinant Proteins




     SH3GL3 Proteins, Antibodies, CLIAs, and ELISAs
     Search LifeMap BioReagents cell lines for SH3GL3
     Gene Synthesis
     Protein Engineering
     Variant Library Synthesis
     Codon Optimization
     Protein Production and Purification
     Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for SH3GL3
     SwitchGear 3'UTR luciferase reporter plasmids for SH3GL3
     SwitchGear Promoter luciferase reporter plasmids for SH3GL3
     Search ThermoFisher Antibodies for SH3GL3
     Vector BioLabs ready-to-use adenovirus/AAV for human, mouse, rat SH3GL3
           
    GeneCards Homepage - Last full update: 18 Mar 2013 - Incrementals: 21 Mar 2013 , 15 Apr 2013 , 26 Apr 2013

    View Random Gene

    Category
    VWF
    (GIFTS: 73)
    von Willebrand factor
    GIFtS Group
    The GeneCards human gene database gene index: 1 3 5 6 A B C D E F G H I J K L M N O P Q R S T U V W X Y Z 


    Developed at the Crown Human Genome Center, Department of Molecular Genetics, the Weizmann Institute of Science

    Hot genes      Disease genes      SH3GL3 gene at Home site.
    hostname: 356977-web1.xennexinc.com index build: 100 solr: 1.4