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SH3GL1P2 Gene(Pseudogene)

SH3 Domain Containing GRB2 Like 1 Pseudogene 2

GCID:
GC17P030624
GIFtS:
14
Genes Participants
UDN Logo

Aliases for SH3GL1P2 Gene

Aliases for SH3GL1P2 Gene

  • SH3 Domain Containing GRB2 Like 1 Pseudogene 2 2 3
  • SH3-Domain GRB2-Like 1 Pseudogene 2 3 5
  • SH3-Domain GRB2-Like Pseudogene 2 2 3
  • CNSA-P2 3
  • SH3GLP2 3

External Ids for SH3GL1P2 Gene

Previous HGNC Symbols for SH3GL1P2 Gene

  • SH3GLP2

Previous GeneCards Identifiers for SH3GL1P2 Gene

  • GC17P025971
  • GC17P028947
  • GC17M025157

Summaries for SH3GL1P2 Gene

GeneCards Summary for SH3GL1P2 Gene

SH3GL1P2 (SH3 Domain Containing GRB2 Like 1 Pseudogene 2) is a Pseudogene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for SH3GL1P2 Gene

Genomics for SH3GL1P2 Gene

Products:

  1. Regulatory Element

Regulatory Elements for SH3GL1P2 Gene

Enhancers for SH3GL1P2 Gene
GeneHancer Identifier Score Enhancer Sources TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Other Gene Targets for Enhancer

Enhancers around SH3GL1P2 on UCSC Golden Path with GeneCards custom track

Genomic Location for SH3GL1P2 Gene

Chromosome:
17
Start:
30,624,318 bp from pter
End:
30,626,823 bp from pter
Size:
2,506 bases
Orientation:
Plus strand

Genomic View for SH3GL1P2 Gene

Genes around SH3GL1P2 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
SH3GL1P2 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for SH3GL1P2 Gene
GeneLoc Logo Genomic Neighborhood • Exon Structure • Gene Density

RefSeq DNA sequence for SH3GL1P2 Gene

Proteins for SH3GL1P2 Gene

Products:

  1. Antibody
  2. Protein
  3. Assay

Post-translational modifications for SH3GL1P2 Gene

No Post-translational modifications

No data available for DME Specific Peptides for SH3GL1P2 Gene

Domains & Families for SH3GL1P2 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for SH3GL1P2 Gene

Function for SH3GL1P2 Gene

Products:

  1. Animal Model
  2. CRISPR
  3. miRNA
  4. Inhibitory RNA
  5. Clone
  6. Cell Line
  7. Flow Cytometry

Flow Cytometry Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for SH3GL1P2 Gene

Localization for SH3GL1P2 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for SH3GL1P2 Gene

Pathways & Interactions for SH3GL1P2 Gene

SuperPathways for SH3GL1P2 Gene

PathCards logoMore details on SuperPathways for SH3GL1P2
No Data Available

Interacting Proteins for SH3GL1P2 Gene

Gene Ontology (GO) - Biological Process for SH3GL1P2 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for SH3GL1P2 Gene

Drugs & Compounds for SH3GL1P2 Gene

Products:

  1. Drug
No Compound Related Data Available

Transcripts for SH3GL1P2 Gene

Products:

  1. CRISPR
  2. miRNA
  3. Inhibitory RNA
  4. Clone
  5. Flow Cytometry

mRNA/cDNA for SH3GL1P2 Gene

(1) Selected AceView cDNA sequences:
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Flow Cytometry Products

Alternative Splicing Database (ASD) splice patterns (SP) for SH3GL1P2 Gene

No ASD Table

Relevant External Links for SH3GL1P2 Gene

GeneLoc Exon Structure for
SH3GL1P2
ECgene alternative splicing isoforms for
SH3GL1P2

Expression for SH3GL1P2 Gene

Products:

  1. Primer

mRNA expression in normal human tissues for SH3GL1P2 Gene

mRNA expression in normal human tissues for SH3GL1P2 Gene
mRNA expression by GTEx for SH3GL1P2 Gene

SOURCE GeneReport for Unigene cluster for SH3GL1P2 Gene Hs.684860

genes like me logo Genes that share expression patterns with SH3GL1P2: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , mRNA Expression by UniProt/SwissProt and Protein tissue co-expression partners for SH3GL1P2 Gene

Orthologs for SH3GL1P2 Gene

Evolution for SH3GL1P2 Gene

ENSEMBL:
Gene Tree for SH3GL1P2 (if available)
TreeFam:
Gene Tree for SH3GL1P2 (if available)

No data available for Orthologs for SH3GL1P2 Gene

Paralogs for SH3GL1P2 Gene

No data available for Paralogs for SH3GL1P2 Gene

Variants for SH3GL1P2 Gene

Structural Variations from Database of Genomic Variants (DGV) for SH3GL1P2 Gene

Variant ID Type Subtype PubMed ID
nsv515870 CNV Gain 19592680
nsv827943 CNV Gain 20364138
nsv908047 CNV Gain 21882294
nsv7292 OTHER Inversion 18451855
esv2715813 CNV Deletion 23290073
nsv499557 OTHER Inversion 21111241
nsv457720 CNV Loss 19166990
nsv9534 CNV Gain 18304495

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Variation tolerance and Relevant External Links for SH3GL1P2 Gene

Disorders for SH3GL1P2 Gene

Relevant External Links for SH3GL1P2

Human Genome Epidemiology (HuGE) Navigator
SH3GL1P2
Atlas of Genetics and Cytogenetics in Oncology and Haematology:
SH3GL1P2

No disorders were found for SH3GL1P2 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for SH3GL1P2 Gene

Publications for SH3GL1P2 Gene

  1. A novel SH3-containing human gene family preferentially expressed in the central nervous system. (PMID: 9169142) Giachino C. … Migone N. (Genomics 1997) 2 3 67
  2. RNF135 mutations are not present in patients with Sotos syndrome-like features. (PMID: 19291764) Visser R. … Losekoot M. (Am. J. Med. Genet. A 2009) 3

Products for SH3GL1P2 Gene

Sources for SH3GL1P2 Gene

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