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Aliases for SH3GL1P1 Gene

Aliases for SH3GL1P1 Gene

  • SH3 Domain Containing GRB2 Like 1, Endophilin A2 Pseudogene 1 2 3
  • SH3 Domain Containing GRB2 Like 1 Pseudogene 1 2 3
  • SH3-Domain GRB2-Like Pseudogene 1 2 3
  • SH3-Domain GRB2-Like 1 Pseudogene 1 3
  • CNSA-P1 3
  • SH3GLP1 3

External Ids for SH3GL1P1 Gene

Previous HGNC Symbols for SH3GL1P1 Gene

  • SH3GLP1

Previous GeneCards Identifiers for SH3GL1P1 Gene

  • GC17P027393
  • GC17P030366
  • GC17P030369
  • GC17P032039

Summaries for SH3GL1P1 Gene

GeneCards Summary for SH3GL1P1 Gene

SH3GL1P1 (SH3 Domain Containing GRB2 Like 1, Endophilin A2 Pseudogene 1) is a Pseudogene.

Additional gene information for SH3GL1P1 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for SH3GL1P1 Gene

Genomics for SH3GL1P1 Gene

GeneHancer (GH) Regulatory Elements for SH3GL1P1 Gene

Promoters and enhancers for SH3GL1P1 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH17I032927 Promoter/Enhancer 2 EPDnew Ensembl ENCODE 19.4 +888.5 888511 3 HDGF FOXA2 MLX ARNT ZFP64 ARID4B YBX1 DMAP1 ZNF280A ZNF121 TMEM98 ZNF207 SUZ12 SH3GL1P1 LRRC37B PIR43668
GH17I031093 Promoter/Enhancer 2 EPDnew Ensembl ENCODE 13.6 -944.7 -944660 2.8 SMAD1 ARID4B SIN3A FEZF1 DMAP1 ZNF2 YY1 POLR2B ZNF213 FOS LOC105371722 MIR4733 NF1 ENSG00000264456 RNF135 SUZ12 UTP6 SH3GL1P2 SH3GL1P1 ATAD5
GH17I032340 Promoter/Enhancer 2.1 EPDnew Ensembl ENCODE 11 +302.1 302096 2.2 ZFP64 FEZF1 DMAP1 IRF4 YY1 ZNF213 E2F8 ZNF143 SP3 NFYC C17orf75 ZNF207 UTP6 SUZ12 RHBDL3 TMEM98 SH3GL1P1 PSMD11 MYO1D OOSP1P2
GH17I031900 Promoter/Enhancer 2 EPDnew Ensembl ENCODE 11 -138.5 -138474 1.8 HDGF PKNOX1 FOXA2 SMAD1 ARID4B SIN3A DMAP1 YBX1 ZNF2 IRF4 UTP6 ZNF207 SUZ12 COPRS TEFM PSMD11 DPRXP4 SH3GL1P1 ENSG00000264456 ENSG00000263990
GH17I031586 Enhancer 0.7 ENCODE dbSUPER 5 -452.5 -452463 2.4 MITF ZNF335 ATF4 USF1 CEBPG BCL6 RNU6ATAC7P MIR193A UTP6 RAB11FIP4 SH3GL1P1 ENSG00000266877 GC17M031638 PIR51917
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around SH3GL1P1 on UCSC Golden Path with GeneCards custom track

Genomic Locations for SH3GL1P1 Gene

Genomic Locations for SH3GL1P1 Gene
chr17:32,039,974-32,042,832
(GRCh38/hg38)
Size:
2,859 bases
Orientation:
Plus strand
chr17:30,366,993-30,369,851
(GRCh37/hg19)

Genomic View for SH3GL1P1 Gene

Genes around SH3GL1P1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
SH3GL1P1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for SH3GL1P1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for SH3GL1P1 Gene

Proteins for SH3GL1P1 Gene

Post-translational modifications for SH3GL1P1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for SH3GL1P1 Gene

Domains & Families for SH3GL1P1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for SH3GL1P1 Gene

Function for SH3GL1P1 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for SH3GL1P1 Gene

Localization for SH3GL1P1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for SH3GL1P1 Gene

Pathways & Interactions for SH3GL1P1 Gene

SuperPathways for SH3GL1P1 Gene

No Data Available

Interacting Proteins for SH3GL1P1 Gene

Gene Ontology (GO) - Biological Process for SH3GL1P1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for SH3GL1P1 Gene

Drugs & Compounds for SH3GL1P1 Gene

No Compound Related Data Available

Transcripts for SH3GL1P1 Gene

mRNA/cDNA for SH3GL1P1 Gene

(3) Additional mRNA sequences :
(3) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for SH3GL1P1 Gene

SH3-domain GRB2-like 1 pseudogene 1:
Representative Sequences:

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for SH3GL1P1 Gene

No ASD Table

Relevant External Links for SH3GL1P1 Gene

GeneLoc Exon Structure for
SH3GL1P1
ECgene alternative splicing isoforms for
SH3GL1P1

Expression for SH3GL1P1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for SH3GL1P1 Gene

NURSA nuclear receptor signaling pathways regulating expression of SH3GL1P1 Gene:

SH3GL1P1

SOURCE GeneReport for Unigene cluster for SH3GL1P1 Gene:

Hs.672460
genes like me logo Genes that share expression patterns with SH3GL1P1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for SH3GL1P1 Gene

Orthologs for SH3GL1P1 Gene

Evolution for SH3GL1P1 Gene

ENSEMBL:
Gene Tree for SH3GL1P1 (if available)
TreeFam:
Gene Tree for SH3GL1P1 (if available)

No data available for Orthologs for SH3GL1P1 Gene

Paralogs for SH3GL1P1 Gene

No data available for Paralogs for SH3GL1P1 Gene

Variants for SH3GL1P1 Gene

Sequence variations from dbSNP and Humsavar for SH3GL1P1 Gene

SNP ID Clin Chr 17 pos Variation AA Info Type
rs1000621029 -- 32,042,299(+) C/T non_coding_transcript_variant
rs1000678193 -- 32,042,030(+) T/A non_coding_transcript_variant
rs1001349112 -- 32,040,222(+) T/C upstream_transcript_variant
rs1001798419 -- 32,039,790(+) G/A upstream_transcript_variant
rs1005207362 -- 32,040,265(+) C/T upstream_transcript_variant

Structural Variations from Database of Genomic Variants (DGV) for SH3GL1P1 Gene

Variant ID Type Subtype PubMed ID
esv2758684 CNV gain 17122850
esv3640375 CNV gain 21293372
nsv1062194 CNV gain 25217958
nsv962309 CNV duplication 23825009

Additional Variant Information for SH3GL1P1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
SH3GL1P1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for SH3GL1P1 Gene

Disorders for SH3GL1P1 Gene

Additional Disease Information for SH3GL1P1

No disorders were found for SH3GL1P1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for SH3GL1P1 Gene

Publications for SH3GL1P1 Gene

  1. A novel SH3-containing human gene family preferentially expressed in the central nervous system. (PMID: 9169142) Giachino C … Migone N (Genomics 1997) 2 3 58

Products for SH3GL1P1 Gene

Sources for SH3GL1P1 Gene

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