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Aliases for SH3GL1P1 Gene

Aliases for SH3GL1P1 Gene

  • SH3 Domain Containing GRB2 Like 1, Endophilin A2 Pseudogene 1 2 3 5
  • SH3 Domain Containing GRB2 Like 1 Pseudogene 1 2 3
  • SH3-Domain GRB2-Like Pseudogene 1 2 3
  • SH3-Domain GRB2-Like 1 Pseudogene 1 3
  • CNSA-P1 3
  • SH3GLP1 3

External Ids for SH3GL1P1 Gene

Previous HGNC Symbols for SH3GL1P1 Gene

  • SH3GLP1

Previous GeneCards Identifiers for SH3GL1P1 Gene

  • GC17P027393
  • GC17P030366
  • GC17P030369

Summaries for SH3GL1P1 Gene

GeneCards Summary for SH3GL1P1 Gene

SH3GL1P1 (SH3 Domain Containing GRB2 Like 1, Endophilin A2 Pseudogene 1) is a Pseudogene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for SH3GL1P1 Gene

Genomics for SH3GL1P1 Gene

Regulatory Elements for SH3GL1P1 Gene

Enhancers for SH3GL1P1 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH17F031093 0.4 ENCODE 13.6 -944.7 -944660 2.8 ARID4B SIN3A FEZF1 DMAP1 ZNF2 YY1 FOS ZNF263 SP3 SMARCB1 ENSG00000264456 RNF135 SUZ12 UTP6 SH3GL1P2 SH3GL1P1 ATAD5 DPRXP4 OMG MIR4733
GH17F032557 1.4 FANTOM5 Ensembl ENCODE 11.7 +518.6 518586 2.3 HDGF TBP PKNOX1 ZFP64 ZNF121 CBX5 ETV6 FOS ZNF680 ZNF654 UTP6 SUZ12 CDK5R1 SH3GL1P1 GC17M032557 ENSG00000265337
GH17F031586 1 Ensembl ENCODE 5 -452.5 -452464 2.4 ZNF316 CEBPB BCL6 TBX21 EMSY MAFK ZBTB20 RNU6ATAC7P MIR193A UTP6 RAB11FIP4 SH3GL1P1 ENSG00000266877 GC17M031638 PIR51917
- Elite enhancer/Elite enhancer-gene association Download Table
Download GeneHancer data dump

Enhancers around SH3GL1P1 on UCSC Golden Path with GeneCards custom track

Genomic Location for SH3GL1P1 Gene

Chromosome:
17
Start:
32,039,974 bp from pter
End:
32,042,832 bp from pter
Size:
2,859 bases
Orientation:
Plus strand

Genomic View for SH3GL1P1 Gene

Genes around SH3GL1P1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
SH3GL1P1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for SH3GL1P1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for SH3GL1P1 Gene

Proteins for SH3GL1P1 Gene

Post-translational modifications for SH3GL1P1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for SH3GL1P1 Gene

Domains & Families for SH3GL1P1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for SH3GL1P1 Gene

Function for SH3GL1P1 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for SH3GL1P1 Gene

Localization for SH3GL1P1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for SH3GL1P1 Gene

Pathways & Interactions for SH3GL1P1 Gene

SuperPathways for SH3GL1P1 Gene

No Data Available

Interacting Proteins for SH3GL1P1 Gene

Gene Ontology (GO) - Biological Process for SH3GL1P1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for SH3GL1P1 Gene

Transcripts for SH3GL1P1 Gene

mRNA/cDNA for SH3GL1P1 Gene

(3) Additional mRNA sequences :
(3) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for SH3GL1P1 Gene

SH3-domain GRB2-like 1 pseudogene 1:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for SH3GL1P1 Gene

No ASD Table

Relevant External Links for SH3GL1P1 Gene

GeneLoc Exon Structure for
SH3GL1P1
ECgene alternative splicing isoforms for
SH3GL1P1

Expression for SH3GL1P1 Gene

mRNA expression in normal human tissues for SH3GL1P1 Gene

NURSA nuclear receptor signaling pathways regulating expression of SH3GL1P1 Gene:

SH3GL1P1

SOURCE GeneReport for Unigene cluster for SH3GL1P1 Gene:

Hs.672460
genes like me logo Genes that share expression patterns with SH3GL1P1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for SH3GL1P1 Gene

Orthologs for SH3GL1P1 Gene

Evolution for SH3GL1P1 Gene

ENSEMBL:
Gene Tree for SH3GL1P1 (if available)
TreeFam:
Gene Tree for SH3GL1P1 (if available)

No data available for Orthologs for SH3GL1P1 Gene

Paralogs for SH3GL1P1 Gene

No data available for Paralogs for SH3GL1P1 Gene

Variants for SH3GL1P1 Gene

Sequence variations from dbSNP and Humsavar for SH3GL1P1 Gene

SNP ID Clin Chr 17 pos Sequence Context AA Info Type
rs112227105 -- 32,038,672(+) GCCAA(C/T)GTGGC intron-variant, upstream-variant-2KB
rs112891271 -- 32,042,751(+) AGAGA(A/T)GAGCA intron-variant, nc-transcript-variant
rs113387053 -- 32,039,591(+) ATATA(C/T)TTATA intron-variant, upstream-variant-2KB
rs113930732 -- 32,039,226(+) CCGGC(A/C)TCGTT intron-variant, upstream-variant-2KB
rs12453765 -- 32,042,640(+) TGGGC(C/T)ACATT intron-variant, nc-transcript-variant

Structural Variations from Database of Genomic Variants (DGV) for SH3GL1P1 Gene

Variant ID Type Subtype PubMed ID
esv2758684 CNV gain 17122850
esv3640375 CNV gain 21293372
nsv1062194 CNV gain 25217958
nsv962309 CNV duplication 23825009

Relevant External Links for SH3GL1P1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
SH3GL1P1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for SH3GL1P1 Gene

Disorders for SH3GL1P1 Gene

Relevant External Links for SH3GL1P1

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
SH3GL1P1

No disorders were found for SH3GL1P1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for SH3GL1P1 Gene

Publications for SH3GL1P1 Gene

  1. A novel SH3-containing human gene family preferentially expressed in the central nervous system. (PMID: 9169142) Giachino C. … Migone N. (Genomics 1997) 2 3 64

Products for SH3GL1P1 Gene

Sources for SH3GL1P1 Gene

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