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Aliases for SH3BGRL3 Gene

Aliases for SH3BGRL3 Gene

  • SH3 Domain Binding Glutamate-Rich Protein Like 3 2 3
  • SH3 Domain Binding Glutamic Acid-Rich Protein Like 3 2 3
  • SH3 Domain-Binding Protein 1 3 4
  • SH3BP-1 3 4
  • SH3 Domain-Binding Glutamic Acid-Rich-Like Protein 3 3
  • Epididymis Secretory Protein Li 297 3
  • TNF Inhibitory Protein 3
  • SH3BGRL3-Like Protein 3
  • HEL-S-297 3
  • TIP-B1 3

External Ids for SH3BGRL3 Gene

Previous GeneCards Identifiers for SH3BGRL3 Gene

  • GC01P026086
  • GC01P025627
  • GC01P025838
  • GC01P026211
  • GC01P026478
  • GC01P026605
  • GC01P024860

Summaries for SH3BGRL3 Gene

GeneCards Summary for SH3BGRL3 Gene

SH3BGRL3 (SH3 Domain Binding Glutamate-Rich Protein Like 3) is a Protein Coding gene. GO annotations related to this gene include electron carrier activity and protein disulfide oxidoreductase activity. An important paralog of this gene is SH3BGRL2.

UniProtKB/Swiss-Prot for SH3BGRL3 Gene

  • Could act as a modulator of glutaredoxin biological activity

Gene Wiki entry for SH3BGRL3 Gene

No data available for Entrez Gene Summary , Tocris Summary , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for SH3BGRL3 Gene

Genomics for SH3BGRL3 Gene

Regulatory Elements for SH3BGRL3 Gene

Epigenetics Products

  • DNA Methylation CpG Assay Predesigned for Pyrosequencing in human,mouse,rat

Genomic Location for SH3BGRL3 Gene

Start:
26,279,176 bp from pter
End:
26,281,522 bp from pter
Size:
2,347 bases
Orientation:
Plus strand

Genomic View for SH3BGRL3 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for SH3BGRL3 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for SH3BGRL3 Gene

Proteins for SH3BGRL3 Gene

  • Protein details for SH3BGRL3 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Q9H299-SH3L3_HUMAN
    Recommended name:
    SH3 domain-binding glutamic acid-rich-like protein 3
    Protein Accession:
    Q9H299
    Secondary Accessions:
    • Q5T122

    Protein attributes for SH3BGRL3 Gene

    Size:
    93 amino acids
    Molecular mass:
    10438 Da
    Quaternary structure:
    No Data Available

    Three dimensional structures from OCA and Proteopedia for SH3BGRL3 Gene

neXtProt entry for SH3BGRL3 Gene

Proteomics data for SH3BGRL3 Gene at MOPED

Post-translational modifications for SH3BGRL3 Gene

  • Ubiquitination at Lys18
  • Modification sites at PhosphoSitePlus

Other Protein References for SH3BGRL3 Gene

ENSEMBL proteins:
REFSEQ proteins:

No data available for DME Specific Peptides for SH3BGRL3 Gene

Domains for SH3BGRL3 Gene

Protein Domains for SH3BGRL3 Gene

Suggested Antigen Peptide Sequences for SH3BGRL3 Gene

Graphical View of Domain Structure for InterPro Entry

Q9H299

UniProtKB/Swiss-Prot:

SH3L3_HUMAN :
  • Q9H299
Domain:
  • Contains 1 glutaredoxin domain.
Family:
  • Belongs to the SH3BGR family.
genes like me logo Genes that share domains with SH3BGRL3: view

No data available for Gene Families for SH3BGRL3 Gene

Function for SH3BGRL3 Gene

Molecular function for SH3BGRL3 Gene

UniProtKB/Swiss-Prot Function: Could act as a modulator of glutaredoxin biological activity

Gene Ontology (GO) - Molecular Function for SH3BGRL3 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005096 GTPase activator activity IMP 24841563
GO:0009055 electron carrier activity IEA --
GO:0015035 protein disulfide oxidoreductase activity IEA --
GO:0030215 semaphorin receptor binding IPI 24841563
genes like me logo Genes that share ontologies with SH3BGRL3: view

Animal Model Products

CRISPR Products

miRNA for SH3BGRL3 Gene

miRTarBase miRNAs that target SH3BGRL3

No data available for Enzyme Numbers (IUBMB) , Phenotypes , Animal Models , Transcription Factor Targeting and HOMER Transcription for SH3BGRL3 Gene

Localization for SH3BGRL3 Gene

Subcellular locations from UniProtKB/Swiss-Prot for SH3BGRL3 Gene

Cytoplasm. Nucleus.

Subcellular locations from

COMPARTMENTS
Jensen Localization Image for SH3BGRL3 Gene COMPARTMENTS Subcellular localization image for SH3BGRL3 gene
Compartment Confidence
nucleus 5
cytosol 3
mitochondrion 2
peroxisome 1

Gene Ontology (GO) - Cellular Components for SH3BGRL3 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005634 nucleus IEA --
GO:0005737 cytoplasm IEA --
GO:0030027 lamellipodium IDA 24841563
GO:0070062 extracellular exosome IDA 19056867
genes like me logo Genes that share ontologies with SH3BGRL3: view

Pathways for SH3BGRL3 Gene

SuperPathways for SH3BGRL3 Gene

No Data Available

Interacting Proteins for SH3BGRL3 Gene

Gene Ontology (GO) - Biological Process for SH3BGRL3 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0030834 regulation of actin filament depolymerization IMP 24841563
GO:0032956 regulation of actin cytoskeleton organization IMP 24841563
GO:0043535 regulation of blood vessel endothelial cell migration IMP 24841563
GO:0043547 positive regulation of GTPase activity IMP 24841563
GO:0045454 cell redox homeostasis IEA --
genes like me logo Genes that share ontologies with SH3BGRL3: view

No data available for Pathways by source for SH3BGRL3 Gene

Transcripts for SH3BGRL3 Gene

mRNA/cDNA for SH3BGRL3 Gene

Unigene Clusters for SH3BGRL3 Gene

SH3 domain binding glutamic acid-rich protein like 3:
Representative Sequences:

CRISPR Products

Inhibitory RNA Products

  • Predesigned siRNA for gene silencing in human,mouse,rat for SH3BGRL3

Primer Products

Flow Cytometry Products

Alternative Splicing Database (ASD) splice patterns (SP) for SH3BGRL3 Gene

No ASD Table

Relevant External Links for SH3BGRL3 Gene

GeneLoc Exon Structure for
SH3BGRL3
ECgene alternative splicing isoforms for
SH3BGRL3

Expression for SH3BGRL3 Gene

mRNA expression in normal human tissues for SH3BGRL3 Gene

mRNA expression in embryonic tissues and stem cells from LifeMap Discovery

mRNA differential expression in normal tissues according to GTEx for SH3BGRL3 Gene

This gene is overexpressed in Whole Blood (14.1).

Integrated Proteomics: protein expression from ProteomicsDB, PaxDb, and MOPED for SH3BGRL3 Gene

SOURCE GeneReport for Unigene cluster for SH3BGRL3 Gene Hs.109051

mRNA Expression by UniProt/SwissProt for SH3BGRL3 Gene

Q9H299-SH3L3_HUMAN
Tissue specificity: Ubiquitous.
genes like me logo Genes that share expressions with SH3BGRL3: view

In Situ Assay Products

Orthologs for SH3BGRL3 Gene

This gene was present in the common ancestor of animals.

Orthologs for SH3BGRL3 Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia SH3BGRL3 35
  • 99.28 (n)
  • 100 (a)
SH3BGRL3 36
  • 41 (a)
OneToOne
cow
(Bos Taurus)
Mammalia SH3BGRL3 35
  • 96.06 (n)
  • 100 (a)
SH3BGRL3 36
  • 52 (a)
OneToOne
dog
(Canis familiaris)
Mammalia SH3BGRL3 35
  • 96.42 (n)
  • 100 (a)
SH3BGRL3 36
  • 57 (a)
OneToOne
mouse
(Mus musculus)
Mammalia Sh3bgrl3 35
  • 91.4 (n)
  • 95.7 (a)
Sh3bgrl3 16
Sh3bgrl3 36
  • 96 (a)
OneToOne
oppossum
(Monodelphis domestica)
Mammalia SH3BGRL3 36
  • 90 (a)
OneToOne
rat
(Rattus norvegicus)
Mammalia Sh3bgrl3 35
  • 90.32 (n)
  • 97.85 (a)
chicken
(Gallus gallus)
Aves SH3BGRL3 35
  • 84.23 (n)
  • 90.32 (a)
SH3BGRL3 36
  • 90 (a)
OneToOne
lizard
(Anolis carolinensis)
Reptilia SH3BGRL3 36
  • 85 (a)
OneToOne
tropical clawed frog
(Silurana tropicalis)
Amphibia sh3bgrl3 35
  • 65.17 (n)
  • 67.42 (a)
Str.20441 35
zebrafish
(Danio rerio)
Actinopterygii sh3bgrl3 35
  • 64.84 (n)
  • 60.44 (a)
sh3bgrl3 36
  • 60 (a)
OneToOne
fruit fly
(Drosophila melanogaster)
Insecta Sh3beta 36
  • 8 (a)
OneToMany
worm
(Caenorhabditis elegans)
Secernentea Y105E8A.1 36
  • 16 (a)
OneToMany
sea squirt
(Ciona savignyi)
Ascidiacea -- 36
  • 13 (a)
OneToOne
Species with no ortholog for SH3BGRL3:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • wheat (Triticum aestivum)

Evolution for SH3BGRL3 Gene

ENSEMBL:
Gene Tree for SH3BGRL3 (if available)
TreeFam:
Gene Tree for SH3BGRL3 (if available)

Paralogs for SH3BGRL3 Gene

Paralogs for SH3BGRL3 Gene

Selected SIMAP similar genes for SH3BGRL3 Gene using alignment to 3 proteins:

Pseudogenes.org Pseudogenes for SH3BGRL3 Gene

genes like me logo Genes that share paralogs with SH3BGRL3: view

Variants for SH3BGRL3 Gene

Sequence variations from dbSNP and Humsavar for SH3BGRL3 Gene

SNP ID Clin Chr 01 pos Sequence Context AA Info Type MAF
rs7544 -- 26,281,235(-) ACTCT(A/C)AGGTT utr-variant-3-prime
rs1127560 -- 26,280,783(+) AGAGC(A/G)AGGTG missense, reference
rs1127756 -- 26,281,450(+) GAGCT(C/T)TGCCA utr-variant-3-prime
rs1127770 -- 26,281,473(+) TCCCT(C/T)TCCCA utr-variant-3-prime
rs1139743 -- 26,281,303(+) TCCAT(C/T)TAAAG utr-variant-3-prime

Relevant External Links for SH3BGRL3 Gene

HapMap Linkage Disequilibrium report
SH3BGRL3

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Structural Variations from Database of Genomic Variants (DGV) for SH3BGRL3 Gene

Disorders for SH3BGRL3 Gene

(2) Novoseek inferred disease relationships for SH3BGRL3 Gene

Disease -log(P) Hits PubMed IDs
necrosis 14.6 1
tumors 4.65 1
genes like me logo Genes that share disorders with SH3BGRL3: view

No data available for UniProtKB/Swiss-Prot for SH3BGRL3 Gene

Publications for SH3BGRL3 Gene

  1. A novel human homologue of the SH3BGR gene encodes a small protein similar to glutaredoxin 1 of Escherichia coli. (PMID: 11444877) Mazzocco M. … Scartezzini P. (Biochem. Biophys. Res. Commun. 2001) 3 4 23
  2. NMR structure and regulated expression in APL cell of human SH3BGRL3. (PMID: 15907482) Xu C. … Shi Y. (FEBS Lett. 2005) 3 4 23
  3. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PMID: 15489334) Gerhard D.S. … Malek J. (Genome Res. 2004) 3 4
  4. Phosphotyrosine interactome of the ErbB-receptor kinase family. (PMID: 16729043) Schulze W.X. … Mann M. (Mol. Syst. Biol. 2005) 3
  5. Toward a confocal subcellular atlas of the human proteome. (PMID: 18029348) Barbe L. … Andersson-Svahn H. (Mol. Cell Proteomics 2008) 3

Products for SH3BGRL3 Gene

Sources for SH3BGRL3 Gene

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