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Category   Symbol Source: HGNC EntrezGene Ensembl GeneCards RNA genes CroW21
GIFtS

SGOL1 Gene

protein-coding   GIFtS: 54
GCID: GC03M020179

shugoshin-like 1 (S. pombe)

 Explore 8 diseases affiliated with
SGOL1 via our new
 Human Malady Compendium 
Biological research products
for SGOL1
    

(According to 1HGNC, 2Entrez Gene,
3UniProtKB/Swiss-Prot, 4UniProtKB/TrEMBL, 5OMIM, 6GeneLoc, 7Ensembl, 8DME, 9miRBase, and/or 10fRNAdb)
About This Section

Aliases
Shugoshin-Like 1 (S. Pombe)1 2     Shugoshin 1AB Protein2
NY-BR-851 2     Shugoshin 1CD Protein2
Serologically Defined Breast Cancer Antigen NY-BR-852 3     Shugoshin 1EF Protein2
HSgo11     Shugoshin 1GH Protein2
SGO2 5     Shugoshin 1KL Protein2
SGO13 5     Shugoshin-Like 12
Sgo12     

External Ids:    HGNC: 250881   Entrez Gene: 1516482   Ensembl: ENSG000001298107   OMIM: 6091685   UniProtKB: Q5FBB73   

Export aliases for SGOL1 gene to outside databases

Previous GC identifer: GC03M020178


(According to Entrez Gene, Tocris Bioscience, Wikipedia's Gene Wiki, PharmGKB,
UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL)
About This Section

UniProtKB/Swiss-Prot: SGOL1_HUMAN, Q5FBB7
Function: Plays a central role in chromosome cohesion during mitosis by preventing premature dissociation of cohesin
complex from centromeres after prophase, when most of cohesin complex dissociates from chromosomes arms. May act by
preventing phosphorylation of the STAG2 subunit of cohesin complex at the centromere, ensuring cohesin persistence at
centromere until cohesin cleavage by ESPL1/separase at anaphase. Essential for proper chromosome segregation during
mitosis and this function requires interaction with PPP2R1A. Its phosphorylated form is necessary for chromosome
congression and for the proper attachment of spindle microtubule to the kinetochore. Necessary for kinetochore
localization of PLK1 and CENPF. May play a role in the tension sensing mechanism of the spindle-assembly checkpoint by
regulating PLK1 kinetochore affinity. Isoform 3 plays a role in maintaining centriole cohesion involved in controlling
spindle pole integrity

Gene Wiki entry for SGOL1


(According to GeneLoc and/or HGNC, and/or
Entrez Gene (NCBI build 37),
and/or miRBase,
Genomic Views according to UCSC (hg19) and Ensembl (release 69), Regulatory elements and Epigenetics data according to QIAGEN, SABiosciences, and/or SwitchGear Genomics)
About This Section
RefSeq DNA sequence:
NC_000003.11  NC_018914.1  NT_022517.18  
Regulatory elements:
   SABiosciences Regulatory transcription factor binding sites in the SGOL1 gene promoter:
         N-Myc   NF-AT4   NF-AT2   NF-AT3   NF-AT   NF-AT1   
         Other transcription factors

SwitchGear Promoter luciferase reporter plasmidSGOL1 promoter sequence
   Search SABiosciences Chromatin IP Primers for SGOL1

Epigenetics:
QIAGEN PyroMark CpG Assay predesigned Pyrosequencing DNA Methylation assays in human, mouse, rat SGOL1


Genomic Location:
Genomic View: UCSC Golden Path with GeneCards custom track

Entrez Gene cytogenetic band: 3p24.3   Ensembl cytogenetic band:  3p24.3   HGNC cytogenetic band: 3p24.3

SGOL1 Gene in genomic location: bands according to Ensembl, locations according to (and/or Entrez Gene and/or Ensembl if different)
SGOL1 gene location

GeneLoc information about chromosome 3         GeneLoc Exon Structure

GeneLoc location for GC03M020179:  view genomic region     (about GC identifiers)

Start:
20,202,085 bp from pter      End:
20,227,784 bp from pter
Size:
25,700 bases      Orientation:
minus strand

(According to 1UniProtKB, HORDE, neXtProt, Ensembl, and/or Reactome, Modification sites according to 2PhosphoSitePlus, Specific Peptides from DME, Protein expression images according to data from SPIRE MOPED and PaxDb, RefSeq according to NCBI, PDB rendering according to OCA and/or Proteopedia, Recombinant Proteins from EMD Millipore, R&D Systems, GenScript, Enzo Life Sciences, OriGene, Novus Biologicals, Sino Biological, ProSpec, and/or Uscn,
Biochemical Assays by EMD Millipore, R&D Systems, OriGene, GenScript, Cell Signaling Technology, Enzo Life Sciences, and/or Uscn, Ontologies according to Gene Ontology Consortium 01 Mar 2013 and Entrez Gene, Antibodies by EMD Millipore, R&D Systems, GenScript, Cell Signaling Technology, OriGene, Novus Biologicals, Thermo Fisher Scientific, Abcam, and/or Uscn)
About This Section

UniProtKB/Swiss-Prot: SGOL1_HUMAN, Q5FBB7 (See protein sequence)
Recommended Name: Shugoshin-like 1  
Size: 561 amino acids; 64190 Da
Subunit: Interacts with PPP2CA (or PPP2CB), PPP2R1B, PPP2R5A, PPP2R5B, PPP2R5C, PPP2R5D, PPP2R5E, SET, LRRC59, RBM10
(or RBM5), RPL10A, RPL28, RPL7, RPL7A and RPLP1. Interaction with protein phosphatase 2A occurs most probably through
direct binding to the regulatory B56 subunits: PPP2R1B, PPP2R5A, PPP2R5B, PPP2R5C, PPP2R5D, PPP2R5E. Interacts with
PPP2R1A and NEK2. Isoform 3 interacts with PLK1
Subcellular location: Nucleus. Chromosome, centromere. Chromosome, centromere, kinetochore. Cytoplasm, cytoskeleton,
spindle pole. Cytoplasm, cytoskeleton, centrosome. Note=Localizes to the inner centromere throughout prophase until
metaphase and disappears at anaphase. During prometaphase, it localizes to a single focus, while at metaphase, it
localizes to 2 spots corresponding to the 2 centromeres. Centromeric localization requires the presence of BUB1 and
the interaction with PPP2R1A. Localizes to the inner kinetochore from prophase to early metaphase. Co-localizes with
NEK2 and SS18L1 at the kinetochore. Phosphorylation by AUKRB and the presence of BUB1 are required for localization to
the kinetochore. Isoform 1 primarily localizes to kinetochores during G2 phase and mitotic prophase, metaphase, and
anaphase and does not appear to be associated with kinetochores during late mitosis. Isoform 3 is found at the
centrosome in interphase and at spindle poles in mitosis and its spindle pole localization is PLK1 dependent. Isoform
3 does not localize to kinetochores during any stages of the cell cycle
Developmental stage: Appears in prophase cells and remains present until metaphase. Strongly decreases at the onset of
anaphase and completely disappears at telophase. Not present in interphase cells (at protein level)
Miscellaneous: Shugoshin is Japanese for guardian spirit (as it is known to be a protector of centromeric cohesin)
Sequence caution: Sequence=AAH01339.2; Type=Erroneous initiation; Sequence=AAH32696.1; Type=Erroneous initiation;
3 PDB 3D structures from and Proteopedia for SGOL1:
3FGA (3D)        3Q6S (3D)        4A0I (3D)    
Secondary accessions: Q588H5 Q5FBB4 Q5FBB5 Q5FBB6 Q5FBB8 Q8N579 Q8WVL0 Q9BVA8 Q9H275
Alternative splicing: 7 isoforms:  Q5FBB7-1   Q5FBB7-2   Q5FBB7-3   Q5FBB7-4   Q5FBB7-5   Q5FBB7-6   Q5FBB7-7   

Explore the universe of human proteins at neXtProt for SGOL1: NX_Q5FBB7

Post-translational modifications:

  • Ubiquitinated and degraded during mitotic exit by APC/C-Cdh11
  • Phosphorylation by NEK2 is essential for chromosome congression in mitosis and for the proper attachment of spindle
  • microtubule to the kinetochore. Phosphorylated by PLK1 and AUKRB1
  • View modification sites using PhosphoSitePlus2
  • View neXtProt modification sites for NX_Q5FBB7

  • SGOL1 Protein expression data from MOPED and PaxDb:    About this image 
    Estimated protein expression log10 (pmol).

    REFSEQ proteins (13 alternative transcripts): 
    NP_001012409.1  NP_001012410.1  NP_001012411.1  NP_001012412.1  NP_001012413.1  NP_001186180.1  NP_001186181.1  NP_001186182.1  
    NP_001186183.1  NP_001186184.1  NP_001186185.1  NP_001186186.1  NP_612493.1  

    ENSEMBL proteins: 
     ENSP00000306581   ENSP00000394625   ENSP00000263753   ENSP00000414960   ENSP00000413070  
     ENSP00000414129   ENSP00000411200   ENSP00000394957   ENSP00000410458   ENSP00000389034  
     ENSP00000394613   ENSP00000397672   ENSP00000373284   ENSP00000406880   ENSP00000404562  
    Reactome Protein details: Q5FBB7
    Human Recombinant Protein Products: 
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    Novus Biologicals SGOL1 Protein
    Novus Biologicals SGOL1 Lysates
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    Browse ProSpec Recombinant Proteins
    Uscn Proteins for SGOL1

    Gene Ontology (GO): 5/10 cellular component terms (GO ID links to tree view) (see all 10):    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0000775chromosome, centromeric region IDA16682347
    GO:0000776colocalizes with kinetochore IDA16582621
    GO:0000777condensed chromosome kinetochore IEA--
    GO:0000779condensed chromosome, centromeric region IDA19465021
    GO:0000780condensed nuclear chromosome, centromeric region IEA--


    SGOL1 for ontologies           About GeneDecksing



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    (According to InterPro, ProtoNet, UniProtKB, and/or BLOCKS, Sets of similar genes according to GeneDecks)
    About This Section

    SGOL1 for domains           About GeneDecksing

    2 InterPro domains/families:
     IPR011516 Shugoshin_N
     IPR011515 Shugoshin_C

    Graphical View of Domain Structure for InterPro Entry Q5FBB7

    ProtoNet protein and cluster: Q5FBB7

    UniProtKB/Swiss-Prot: SGOL1_HUMAN, Q5FBB7
    Domain: The KEN box and D-box 3 are required for its ubiquitination and degradation
    Similarity: Belongs to the shugoshin family


    (According to 1UniProtKB, Genatlas, LifeMap Discovery™, IUBMB, and/or 2DME, Human phenotypes from GenomeRNAi, Animal models from MGI Mar 06 2013,
    bound targets from SABiosciences, miRNA Gene Targets from miRTarBase shRNA from OriGene, RNAi from EMD Millipore, siRNAs from OriGene, QIAGEN, microRNA from QIAGEN, Gene Editing from DNA2.0, Clones from EMD Millipore, OriGene, SwitchGear Genomics, GenScript, Sino Biological, DNA2.0, and Vector BioLabs, Cell Lines from GenScript, LifeMap BioReagents, In Situ Hybridization Assays from Advanced Cell Diagnostics, Ontologies according to Gene Ontology Consortium 01 Mar 2013 via Entrez Gene.)
    About This Section

    Function Summary:

         UniProtKB/Swiss-Prot: SGOL1_HUMAN, Q5FBB7
    Function: Plays a central role in chromosome cohesion during mitosis by preventing premature dissociation of cohesin
    complex from centromeres after prophase, when most of cohesin complex dissociates from chromosomes arms. May act by
    preventing phosphorylation of the STAG2 subunit of cohesin complex at the centromere, ensuring cohesin persistence at
    centromere until cohesin cleavage by ESPL1/separase at anaphase. Essential for proper chromosome segregation during
    mitosis and this function requires interaction with PPP2R1A. Its phosphorylated form is necessary for chromosome
    congression and for the proper attachment of spindle microtubule to the kinetochore. Necessary for kinetochore
    localization of PLK1 and CENPF. May play a role in the tension sensing mechanism of the spindle-assembly checkpoint by
    regulating PLK1 kinetochore affinity. Isoform 3 plays a role in maintaining centriole cohesion involved in controlling
    spindle pole integrity

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    hsa-miR-4311 hsa-miR-600 hsa-miR-137 hsa-miR-3065-5p hsa-miR-583 hsa-miR-1276 hsa-miR-377 hsa-miR-3148
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    Gene Ontology (GO): 1 molecular function term (GO ID links to tree view):    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0005515protein binding IPI16541025


    SGOL1 for ontologies           About GeneDecksing


    7 GenomeRNAi human phenotypes for SGOL1:
     Abundance of large cells with   Cell cycle / mitosis defect  Decreased Hepatitis C virus re  Increased G2M DNA content, inc 
     Increased gamma-H2AX phosphory  Increased number of cells in m  Increased number of mitotic ce 

    Animal Models:
         3 MGI mutant phenotypes (inferred from 1 allele(MGI details for Sgol1):
     hematopoietic system  immune system  mortality/aging 

    SGOL1 for phenotypes           About GeneDecksing


    (Pathways according to EMD Millipore, R&D Systems, Cell Signaling Technology, KEGG, PharmGKB, BioSystems, Reactome, Tocris Bioscience, GeneGo (Thomson Reuters), QIAGEN, and/or UniProtKB, Sets of similar genes according to GeneDecks, Interaction Networks according to SABiosciences, and/or STRING, Interactions according to 1UniProtKB, 2MINT, 3I2D, and/or 4STRING, with links to IntAct and Ensembl, Ontologies according to Gene Ontology Consortium 01 Mar 2013 via Entrez Gene).
    About This Section

    Unified GeneCards pathways - 5/6 super-pathways (see all 6About this table 
    See pathways by source

    Super-pathwaycontained gene-specific pathways
    1M Phase
    M Phase1.00
    Mitotic Anaphase0.85
    Mitotic M-M/G1 phases0.88
    Separation of Sister Chromatids0.80
    Mitotic Metaphase and Anaphase0.85
    2Resolution of Sister Chromatid Cohesion
    Resolution of Sister Chromatid Cohesion1.00
    Mitotic Prometaphase0.93
    Kinetochore assembly0.96
    3Cell Cycle
    Cell Cycle1.00
    Cell Cycle, Mitotic0.84
    4Aurora B signaling
    Aurora B signaling1.00
    5PLK1 signaling events
    PLK1 signaling events1.00

    Pathway sources
    See GeneCards unified pathways
    Show all pathways


    2 BioSystems Pathways for SGOL1 
        PLK1 signaling events
    Aurora B signaling

    5/10        Reactome Pathways for SGOL1 (see all 10)
        Mitotic Metaphase and Anaphase
    Mitotic Prometaphase
    Resolution of Sister Chromatid Cohesion
    Mitotic Anaphase
    Cell Cycle


    1         Kegg Pathway  (Kegg details for SGOL1):
        Oocyte meiosis


    SGOL1 for pathways           About GeneDecksing

    Interactions:

        SABiosciences Gene Network CentralTM Interacting Genes and Proteins Network for SGOL1

    STRING Interaction Network Preview (showing 5 interactants - click image to see 25)

    5/104 Interacting proteins for SGOL1 (Q5FBB71, 2, 3 ENSP000002637534) via UniProtKB, MINT, STRING, and/or I2D (see all 104)
    InteractantInteraction Details
    GeneCardExternal ID(s)
    PPP2R5AQ151721, 3, ENSP000002614614EBI-2555999,EBI-641666 I2D: score=2 STRING: ENSP00000261461
    PPP2R5DQ147382, 3, ENSP000004179634MINT-8295766 I2D: score=3 STRING: ENSP00000417963
    PPP2R1AP301533, ENSP000003248044I2D: score=2 STRING: ENSP00000324804
    AURKBQ96GD43, ENSP000003139504I2D: score=1 STRING: ENSP00000313950
    CDCA8Q53HL23, ENSP000003161214I2D: score=1 STRING: ENSP00000316121
    About this table

    Gene Ontology (GO): 5/8 biological process terms (GO ID links to tree view) (see all 8):    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0000087M phase of mitotic cell cycle TAS--
    GO:0000236mitotic prometaphase TAS--
    GO:0000278mitotic cell cycle TAS--
    GO:0007059chromosome segregation IDA16580887
    GO:0008608attachment of spindle microtubules to kinetochore IDA17621308


    SGOL1 for ontologies           About GeneDecksing



    (Chemical Compounds according to UniProtKB, Enzo Life Sciences, EMD Millipore, Tocris Bioscience HMDB, BitterDB, and/or Novoseek, and Drugs according to DrugBank, Enzo Life Sciences, and/or PharmGKB, with drugs/clinical trials/news search links to CenterWatch)
    About This Section
    Browse Small Molecules at EMD Millipore
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    Search CenterWatch for drugs/clinical trials and news about SGOL1 

    (Secondary structures according to fRNAdb,
    GenBank/EMBL/DDBJ Accessions according to
    Unigene (Build 235 Homo sapiens; Mar 10 2013) or GenBank,
    RefSeq according to Entrez Gene,
    DOTS (version 10), and/or AceView, transcript ids from Ensembl with links to UCSC,
    exon structure from GeneLoc, alternative splicing isoforms according to ASD and/or ECgene,
    RNAi Products from EMD Millipore,
    siRNAs from OriGene, QIAGEN, shRNA from OriGene, microRNA from QIAGEN,
    Tagged/untagged cDNA clones from OriGene, SwitchGear Genomics, GenScript, DNA2.0, Vector BioLabs, Primers from OriGene, SABiosciences, and/or QIAGEN )
    About This Section

    REFSEQ mRNAs for SGOL1 gene (13 alternative transcripts): 
    NM_001012409.2  NM_001012410.3  NM_001012411.2  NM_001012412.3  NM_001012413.2  NM_001199251.1  NM_001199252.1  NM_001199253.1  
    NM_001199254.1  NM_001199255.1  NM_001199256.1  NM_001199257.1  NM_138484.3  

    Unigene Cluster for SGOL1:

    Shugoshin-like 1 (S. pombe)
    Hs.105153  [show with all ESTs]
    Unigene Representative Sequence: NM_001199251
    16 Ensembl transcripts including schematic representations, and UCSC links where relevant:
    ENST00000306698(uc003cbw.3 uc003cbr.3) ENST00000419233(uc003cbv.3 uc003cbt.3 uc010hfa.3)
    ENST00000263753(uc003cbu.3 uc003cbs.3) ENST00000425061 ENST00000443724
    ENST00000421451 ENST00000452020 ENST00000442720(uc003ccc.3 uc021wtx.1 uc021wty.1 uc003ccb.3 uc003cby.3 uc003cbx.3)
    ENST00000412997(uc003cca.3 uc003cbz.3) ENST00000460637 ENST00000437051
    ENST00000417364 ENST00000456624 ENST00000383774 ENST00000412868 ENST00000429446


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    hsa-miR-4311 hsa-miR-600 hsa-miR-137 hsa-miR-3065-5p hsa-miR-583 hsa-miR-1276 hsa-miR-377 hsa-miR-3148
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    Additional cDNA sequence: 

    AB187577.1 AB187578.1 AB187579.1 AB187580.1 AB187581.1 AB187582.1 AB190994.1 AB193056.1 
    AB193057.1 AB193058.1 AB193059.1 AB193060.1 AB193061.1 AB193062.1 AB193063.1 AB193064.1 
    AB193065.1 AB193066.1 AB451340.1 AB451489.1 AB567656.1 AB567657.1 AF308299.1 AK024292.1 
    AK308095.1 BC001339.2 BC017867.1 BC032696.1 BC039605.1 BX648516.1 NR_046723.1 

    11 DOTS entries:

    DT.203313  DT.95118430  DT.95237273  DT.100659431  DT.100728697  DT.120900907  DT.120900903  DT.100020470 
    DT.91727397  DT.433101  DT.99995913 

    24/54 AceView cDNA sequences (see all 54):

    BF983603 AA514803 AF308299 BM463207 BP353118 AA481066 AA631163 NM_138484 
    BU195471 BC017867 BM457156 BM147491 AK024292 AI051509 BG394433 BM148884 
    BC032696 AI248925 BF035618 BM014461 AA481123 BU164324 AI983275 BX350945 

    GeneLoc Exon Structure

    5/10 Alternative Splicing Database (ASD) splice patterns (SP) for SGOL1 (see all 10)    About this scheme

    ExUns: 1a · 1b · 1c · 1d · 1e ^ 2a · 2b ^ 3a · 3b ^ 4a · 4b ^ 5 ^ 6a · 6b · 6c ^ 7 ^ 8a · 8b ^ 9a · 9b · 9c ^ 10
    SP1:                    -     -                                                     -     -     -     -                                 
    SP2:                                                                                -     -     -     -                                 
    SP3:                    -     -                                               -     -     -     -     -                                 
    SP4:                                                                                -     -     -     -     -     -     -     -         
    SP5:                                                                          -     -     -     -     -                                 


    ECgene alternative splicing isoforms for SGOL1

    (RNA expression data according to H-InvDB, NONCODE, miRBase, and RNAdb, Expression images according to data from BioGPS, Illumina Human BodyMap, and CGAP SAGE, Sets of similar genes according to GeneDecks, in vivo and in vitro expression data from LifeMap Discovery™, plus additional links to Genevestigator, and/or SOURCE, and/or BioGPS, and/or UniProtKB,
    PCR Arrays from SABiosciences, Primers from OriGene, SABiosciences, and/or QIAGEN, In Situ Hybridization Assays from Advanced Cell Diagnostics)
    About This Section

    SGOL1 expression in normal human tissues (normalized intensities)
    See probesets specificity/sensitivity at GeneAnnot
    About this imageBioGPS
    CGAP TAG: CATTCACTAA

    Microarray
    RNAseq (Illumina Body Map)
    (100×FPKM)½
    SAGE (Serial Analysis of Gene Expression)

    About this image
    See SGOL1 Protein Expression from SPIRE MOPED and PaxDB
    Genevestigator expression for SGOL1

    SOURCE GeneReport for Unigene cluster: Hs.105153

    UniProtKB/Swiss-Prot: SGOL1_HUMAN, Q5FBB7
    Tissue specificity: Widely expressed. Highly expressed in testis. Expressed in lung, small intestine, breast, liver and
    placenta. Strongly overexpressed in 90% of breast cancers tested

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    (Orthologs according to 1,2HomoloGene (2older version, for species not in 1newer version), 3euGenes, 4SGD , 5MGI Mar 06 2013, with possible further links to Flybase and/or WormBase, and/or 6Ensembl pan taxonomic compara , Gene Trees according to Ensembl and TreeFam)
    About This Section

    This gene was present in the common ancestor of chordates.

    Orthologs for SGOL1 gene from 4/10 species (see all 10)    About this table
    Organism Taxonomic
    classification
    Gene Description Human
    Similarity
    Orthology
    Type
    Details
    mouse
    (Mus musculus)
    Mammalia Sgol11 , 5 shugoshin-like 1 (S. pombe)1, 5 71.96(n)1
    55.04(a)1
      17 (27.92 cM)5
    724151  NM_028232.21  NP_082508.11 
     536747865 
    chicken
    (Gallus gallus)
    Aves SGOL11 shugoshin-like 1 (S. pombe) 52.21(n)
    40.96(a)
      420650  NM_001199648.1  NP_001186577.1 
    lizard
    (Anolis carolinensis)
    Reptilia SGOL16
    --
    33(a)
    1 ↔ 1
    6(32853630-32865744)
    zebrafish
    (Danio rerio)
    Actinopterygii zgc:1582971 zgc:158297 40.99(n)
    31.32(a)
      791138  NM_001080620.1  NP_001074089.1 


    ENSEMBL Gene Tree for SGOL1 (if available)
    TreeFam Gene Tree for SGOL1 (if available) 

    (Paralogs according to 1HomoloGene,
    2Ensembl, and 3SIMAP, Pseudogenes according to 4Pseudogene.org Build 68)
    About This Section
    Paralogs for SGOL1 gene

    SGOL1 for paralogs           About GeneDecksing


    2 Pseudogenes.org Pseudogenes for SGOL1
    PGOHUM00000244068 PGOHUM00000232695


    (SNPs/Variants according to the 1NCBI SNP Database, 2Ensembl, 3PupaSUITE, UniProtKB, and DNA2.0, Linkage Disequilibrium by HapMap, Structural Variations(CNVs/InDels/Inversions) from the Database of Genomic Variants, Mutations from the Human Gene Mutation Database (HGMD) and the Locus Specific Mutation Databases (LSDB), Blood group antigen gene mutations by BGMUT, Resequencing Primers from QIAGEN, Cancer Mutation PCR Arrays and Assays and Copy Number PCR Arrays from SABiosciences)
    About This Section

    10/525 NCBI SNPs in SGOL1 are shown (see all 525    About this table
    Genomic DataTranscription Related DataAllele Frequencies
    SNP IDValidClinical
    significance
    Chr 3 posSequence#AA
    Chg
    TypeMore#Allele
    freq
    PopTotal
    sample
    More
    ----------
    rs1816788151,2
    --20201695(+) AAATAA/CAAATC 7 -- int10--------
    rs1870966951,2
    --20201782(+) ATTAAA/GAAAAT 7 -- int10--------
    rs1900862471,2
    --20201868(+) AGACAA/GAATCT 7 -- int10--------
    rs1818237101,2
    --20201887(+) GGAACG/TTAGAG 7 -- int10--------
    rs170066841,2
    C,F,H,--20201928(+) CTGAAA/CGATTA 7 -- int117Minor allele frequency- C:0.07NA NS EA 2262
    rs126309291,2
    C,H,--20202053(+) TGTAGA/G/TGTGAG 7 -- int10--------
    rs1501471881,2
    --20202112(+) TAAGAC/GAAATA 7 -- ut310--------
    rs1896552181,2
    --20202183(+) GATTTA/TAAAAA 7 -- ut310--------
    rs1824716361,2
    --20202209(+) TGGGAC/TTGGAG 7 -- ut310--------
    rs1385856091,2
    --20202229(+) TACACA/GATATC 7 -- ut310--------

    HapMap Linkage Disequilibrium report for SGOL1 (20202085 - 20227784 bp)
    Structural Variations (Copy Number Variations, Insertions/Deletions, Inversions)
    Database of Genomic Variants (DGV): 4 variations for SGOL1
         4 CNVs: 63413 37531 5371 8415

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    (in which this Gene is Involved, According to MalaCards, OMIM, UniProtKB, the University of Copenhagen DISEASES database, Genatlas, GeneTests, GAD, HuGE Navigator, and/or TGDB.)
    About This Section

    SGOL1 for disorders           About GeneDecksing

    OMIM gene information: 609168    OMIM disorders: --

    8 diseases for SGOL1:    About MalaCards
    breast cancer    roberts syndrome    fanconi's anemia    myocarditis
    gout    endometrial cancer    anemia    colorectal cancer

    1 disease from the University of Copenhagen DISEASES database for SGOL1:
    Chagas disease
    Human Genome Epidemiology (HuGE) Navigator: SGOL1 (1 document)

    Export disorders for SGOL1 gene to outside databases

    (in PubMed. Associations of this gene to articles via 1Entrez Gene, 2UniProtKB/Swiss-Prot, 3HGNC, 4GAD, 5PharmGKB, 6HMDB, 7DrugBank, 8UniProtKB/TrEMBL, 9 Novoseek, and/or 10fRNAdb)
    About This Section

    PubMed articles for SGOL1 gene, integrated from 9 sources (see all 54):
    (articles sorted by number of sources associating them with SGOL1)
        Utopia: connect your pdf to the dynamic
    world of online information

    1. Humoral immunity to human breast cancer: antigen definition and quantitative analysis of mRNA expression. (PubMed id 12747765)1, 2, 3 Scanlan M.J.... Old L.J. (2001)
    2. Differential subcellular localizations of two human Sgo1 isoforms: implications in regulation of sister chromatid cohesion and microtubule dynamics. (PubMed id 16582621)1, 2, 9 Wang X.... Dai W. (2006)
    3. Multiple anaphase-promoting complex/cyclosome degrons mediate the degradation of human Sgo1. (PubMed id 19015261)1, 2, 9 Karamysheva Z.... Yu H. (2009)
    4. PP2A is required for centromeric localization of Sgo1 and proper chromosome segregation. (PubMed id 16580887)1, 2, 9 Tang Z....Yu H. (2006)
    5. Human Bub1 protects centromeric sister-chromatid cohesion through Shugoshin during mitosis. (PubMed id 15604152)1, 2, 9 Tang Z.... Yu H. (2004)
    6. sSgo1, a major splice variant of Sgo1, functions in centriole cohesion where it is regulated by Plk1. (PubMed id 18331714)1, 2 Wang X....Dai W. (2008)
    7. Phosphorylation of human Sgo1 by NEK2A is essential for chromosome congression in mitosis. (PubMed id 17621308)1, 2 Fu G....Yao X. (2007)
    8. Shugoshin 1 plays a central role in kinetochore assembly and is required for kinetochore targeting of Plk1. (PubMed id 17617734)1, 2 Pouwels J.... Kallio M.J. (2007)
    9. Shugoshin collaborates with protein phosphatase 2A to protect cohesin. (PubMed id 16541025)1, 2 Kitajima T.S.... Watanabe Y. (2006)
    10. Shugoshin prevents dissociation of cohesin from centromeres during mitosis in vertebrate cells. (PubMed id 15737064)1, 2 McGuinness B.E.... Nasmyth K. (2005)

    (in PubMed, OMIM, and NCBI Bookshelf)
    About This Section
     ANDOR
    Aliases
    Free Text  

      Query String
    PubMed
    OMIM
    NCBI Bookshelf
      (Note: In FireFox, select the above section and copy using Ctrl-C)

    (According to Entrez Gene, HGNC, AceView, euGenes, Ensembl, miRBase, ECgene, Kegg, and/or H-InvDB)
    About This Section
    Entrez Gene: 151648 HGNC: 25088 AceView: SGOL1 Ensembl:ENSG00000129810 euGenes: HUgn151648
    ECgene: SGOL1 Kegg: 151648 H-InvDB: SGOL1

    (According to HUGE)
    About This Section
      --

    (According to PharmGKB, ATLAS, HORDE, IMGT, LEIDEN, UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL,
    Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot)
    About This Section
    NameDescription
    PharmGKB entry for SGOL1 Pharmacogenomics, SNPs, Pathways

    (Patent information from GeneIP,
    Licensable technologies from WIS Yeda, Salk, Tufts,
    IP news from LifeMap Sciences, Inc.)
    About This Section
    Patent Information for SGOL1 gene:
    Search GeneIP for patents involving SGOL1

    GeneCards and IP:
    Japan Patent Office Licenses GeneCards     European Patent Office Licenses GeneCards     Improving the IP Search



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