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Aliases for SGMS1-AS1 Gene

Subcategory (RNA class) for SGMS1-AS1 Gene

non-coding RNA

Quality Score for this RNA gene is

3

Aliases for SGMS1-AS1 Gene

  • SGMS1 Antisense RNA 1 2 3

External Ids for SGMS1-AS1 Gene

Summaries for SGMS1-AS1 Gene

GeneCards Summary for SGMS1-AS1 Gene

SGMS1-AS1 (SGMS1 Antisense RNA 1) is an RNA Gene, and belongs to the non-coding RNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for SGMS1-AS1 Gene

Genomics for SGMS1-AS1 Gene

Genomic Location for SGMS1-AS1 Gene

Start:
50,624,951 bp from pter
End:
50,641,451 bp from pter
Size:
16,501 bases
Orientation:
Plus strand

Genomic View for SGMS1-AS1 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for SGMS1-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for SGMS1-AS1 Gene

No data available for Regulatory Elements for SGMS1-AS1 Gene

Proteins for SGMS1-AS1 Gene

Post-translational modifications for SGMS1-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for SGMS1-AS1 Gene

Domains for SGMS1-AS1 Gene

Gene Families for SGMS1-AS1 Gene

HGNC:
  • LNCRNA :Long non-coding RNAs

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with SGMS1-AS1: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for SGMS1-AS1 Gene

Function for SGMS1-AS1 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for SGMS1-AS1 Gene

Localization for SGMS1-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for SGMS1-AS1 Gene

Pathways for SGMS1-AS1 Gene

SuperPathways for SGMS1-AS1 Gene

No Data Available

Interacting Proteins for SGMS1-AS1 Gene

Gene Ontology (GO) - Biological Process for SGMS1-AS1 Gene

None

No data available for Pathways by source for SGMS1-AS1 Gene

Transcripts for SGMS1-AS1 Gene

mRNA/cDNA for SGMS1-AS1 Gene

(3) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for SGMS1-AS1 Gene

No ASD Table

Relevant External Links for SGMS1-AS1 Gene

GeneLoc Exon Structure for
SGMS1-AS1
ECgene alternative splicing isoforms for
SGMS1-AS1

Expression for SGMS1-AS1 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein expression and mRNA Expression by UniProt/SwissProt for SGMS1-AS1 Gene

Orthologs for SGMS1-AS1 Gene

Evolution for SGMS1-AS1 Gene

ENSEMBL:
Gene Tree for SGMS1-AS1 (if available)
TreeFam:
Gene Tree for SGMS1-AS1 (if available)

No data available for Orthologs for SGMS1-AS1 Gene

Paralogs for SGMS1-AS1 Gene

No data available for Paralogs for SGMS1-AS1 Gene

Variants for SGMS1-AS1 Gene

Sequence variations from dbSNP and Humsavar for SGMS1-AS1 Gene

SNP ID Clin Chr 10 pos Sequence Context AA Info Type MAF
rs59194634 -- 50,630,428(+) TCAAT(A/C/T)GAACT nc-transcript-variant

Relevant External Links for SGMS1-AS1 Gene

HapMap Linkage Disequilibrium report
SGMS1-AS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Structural Variations from Database of Genomic Variants (DGV) for SGMS1-AS1 Gene

Disorders for SGMS1-AS1 Gene

No disorders were found for SGMS1-AS1 Gene.

No data available for UniProtKB/Swiss-Prot for SGMS1-AS1 Gene

Publications for SGMS1-AS1 Gene

  1. Regulation of Myelination in the Central Nervous System by Nuclear Lamin B1 and Non-coding RNAs. (PMID: 24495672) Lin S.T. … Fu Y.H. (Transl Neurodegener 2014) 2 3
  2. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T. … Sugano S. (Nat. Genet. 2004) 3
  3. Diversification of transcriptional modulation: large-scale identification and characterization of putative alternative promoters of human genes. (PMID: 16344560) Kimura K. … Sugano S. (Genome Res. 2006) 3

Products for SGMS1-AS1 Gene

Sources for SGMS1-AS1 Gene

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