Free for academic non-profit institutions. Other users need a Commercial license

Aliases for SGK223 Gene

Aliases for SGK223 Gene

  • Homolog Of Rat Pragma Of Rnd2 3
  • Sugen Kinase 223 3 4
  • Tyrosine-Protein Kinase SgK223 3
  • EC 2.7.10.2 4
  • PRAGMIN 3

External Ids for SGK223 Gene

Summaries for SGK223 Gene

Entrez Gene Summary for SGK223 Gene

  • This gene encodes an enzyme that belongs to the tyrosine protein kinase family. A similar protein in rat binds to Rho family GTPase 2 (Rnd2) and regulates neurite outgrowth via activation of Ras homolog gene family, member A (RhoA). [provided by RefSeq, Mar 2014]

GeneCards Summary for SGK223 Gene

SGK223 (Homolog Of Rat Pragma Of Rnd2) is a Protein Coding gene. GO annotations related to this gene include non-membrane spanning protein tyrosine kinase activity.

No data available for UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for SGK223 Gene

Genomics for SGK223 Gene

Genomic Location for SGK223 Gene

Start:
8,317,736 bp from pter
End:
8,386,498 bp from pter
Size:
68,763 bases
Orientation:
Minus strand

Genomic View for SGK223 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for SGK223 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for SGK223 Gene

No data available for Regulatory Elements for SGK223 Gene

Proteins for SGK223 Gene

  • Protein details for SGK223 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Q86YV5-SG223_HUMAN
    Recommended name:
    Tyrosine-protein kinase SgK223
    Protein Accession:
    Q86YV5
    Secondary Accessions:
    • Q8N3N5

    Protein attributes for SGK223 Gene

    Size:
    1406 amino acids
    Molecular mass:
    149624 Da
    Quaternary structure:
    No Data Available

neXtProt entry for SGK223 Gene

Proteomics data for SGK223 Gene at MOPED

Post-translational modifications for SGK223 Gene

  • Modification sites at PhosphoSitePlus
  • Modification sites at neXtProt

Other Protein References for SGK223 Gene

ENSEMBL proteins:
REFSEQ proteins:

No data available for DME Specific Peptides for SGK223 Gene

Domains for SGK223 Gene

Protein Domains for SGK223 Gene

UniProtKB/Swiss-Prot:

SG223_HUMAN
Domain:
  • Contains 1 protein kinase domain.:
    • Q86YV5
Family:
  • Belongs to the protein kinase superfamily.:
    • Q86YV5
genes like me logo Genes that share domains with SGK223: view

No data available for Gene Families for SGK223 Gene

Function for SGK223 Gene

Molecular function for SGK223 Gene

UniProtKB/Swiss-Prot CatalyticActivity: ATP + a [protein]-L-tyrosine = ADP + a [protein]-L-tyrosine phosphate.

Enzyme Numbers (IUBMB) for SGK223 Gene

Gene Ontology (GO) - Molecular Function for SGK223 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0004672 protein kinase activity --
GO:0004715 non-membrane spanning protein tyrosine kinase activity IEA --
GO:0005524 ATP binding IEA --
GO:0016772 transferase activity, transferring phosphorus-containing groups --
genes like me logo Genes that share ontologies with SGK223: view

Phenotypes for SGK223 Gene

GenomeRNAi human phenotypes for SGK223:
genes like me logo Genes that share phenotypes with SGK223: view

miRNA for SGK223 Gene

miRTarBase miRNAs that target SGK223

No data available for Animal Models , Transcription Factor Targeting and HOMER Transcription for SGK223 Gene

Localization for SGK223 Gene

Subcellular locations from

COMPARTMENTS
Jensen Localization Image for SGK223 Gene COMPARTMENTS Subcellular localization image for SGK223 gene
Compartment Confidence
nucleus 3
cytosol 2

No data available for Gene Ontology (GO) - Cellular Components for SGK223 Gene

Pathways for SGK223 Gene

SuperPathways for SGK223 Gene

No Data Available

Interacting Proteins for SGK223 Gene

Gene Ontology (GO) - Biological Process for SGK223 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0006468 protein phosphorylation --
GO:0018108 peptidyl-tyrosine phosphorylation IEA --
genes like me logo Genes that share ontologies with SGK223: view

No data available for Pathways by source for SGK223 Gene

Transcripts for SGK223 Gene

mRNA/cDNA for SGK223 Gene

Unigene Clusters for SGK223 Gene

Homolog of rat pragma of Rnd2:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for SGK223 Gene

No ASD Table

Relevant External Links for SGK223 Gene

GeneLoc Exon Structure for
SGK223

Expression for SGK223 Gene

mRNA expression in normal human tissues for SGK223 Gene

mRNA expression in embryonic tissues and stem cells from LifeMap Discovery

mRNA differential expression in normal tissues according to GTEx for SGK223 Gene

This gene is overexpressed in Brain - Cerebellum (5.9) and Brain - Cerebellar Hemisphere (5.5).

Integrated Proteomics: protein expression from ProteomicsDB, MOPED, and MaxQB for SGK223 Gene

SOURCE GeneReport for Unigene cluster for SGK223 Gene Hs.657673

genes like me logo Genes that share expressions with SGK223: view

Orthologs for SGK223 Gene

This gene was present in the common ancestor of chordates.

Orthologs for SGK223 Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia LOC472692 36
  • 99.18 (n)
  • 98.7 (a)
cow
(Bos Taurus)
Mammalia LOC533821 36
  • 83.35 (n)
  • 81.26 (a)
dog
(Canis familiaris)
Mammalia LOC482885 36
  • 84.14 (n)
  • 82.57 (a)
mouse
(Mus musculus)
Mammalia D8Ertd82e 36
  • 80.07 (n)
  • 77.89 (a)
D8Ertd82e 16
rat
(Rattus norvegicus)
Mammalia Pragmin 36
  • 79.35 (n)
  • 77.49 (a)
chicken
(Gallus gallus)
Aves SGK223 36
  • 60.55 (n)
  • 55.02 (a)
African clawed frog
(Xenopus laevis)
Amphibia LOC398552 36
tropical clawed frog
(Silurana tropicalis)
Amphibia LOC100486686 36
  • 55.67 (n)
  • 54.73 (a)
Species with no ortholog for SGK223:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • oppossum (Monodelphis domestica)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for SGK223 Gene

ENSEMBL:
Gene Tree for SGK223 (if available)
TreeFam:
Gene Tree for SGK223 (if available)

Paralogs for SGK223 Gene

No data available for Paralogs for SGK223 Gene

Variants for SGK223 Gene

Sequence variations from dbSNP and Humsavar for SGK223 Gene

SNP ID Clin Chr 08 pos Sequence Context AA Info Type MAF
rs724265 -- 8,361,666(+) ggttc(A/G)agcag intron-variant
rs724266 -- 8,361,833(+) CTACT(A/G)CTTCT intron-variant
rs744328 -- 8,332,703(+) GGATA(C/T)TTTGA intron-variant
rs867757 -- 8,324,002(-) CCTGC(C/G)CCTGT intron-variant
rs882687 -- 8,386,789(+) CAGCT(C/G/T)TGGAG upstream-variant-2KB

Structural Variations from Database of Genomic Variants (DGV) for SGK223 Gene

Variant ID Type Subtype PubMed ID
dgv2191e1 CNV Complex 17122850
essv21038 CNV CNV 17122850
nsv890331 CNV Loss 21882294
esv274588 CNV Insertion 20981092
esv267582 CNV Insertion 20981092
nsv831227 CNV Gain+Loss 17160897
nsv396756 CNV Loss 16902084
esv33394 CNV Loss 17666407

Relevant External Links for SGK223 Gene

HapMap Linkage Disequilibrium report
SGK223

Disorders for SGK223 Gene

Relevant External Links for SGK223

Genetic Association Database (GAD)
SGK223
Human Genome Epidemiology (HuGE) Navigator
SGK223
genes like me logo Genes that share disorders with SGK223: view

No data available for UniProtKB/Swiss-Prot for SGK223 Gene

Publications for SGK223 Gene

  1. The protein kinase complement of the human genome. (PMID: 12471243) Manning G. … Sudarsanam S. (Science 2002) 3 4
  2. Time-resolved mass spectrometry of tyrosine phosphorylation sites in the epidermal growth factor receptor signaling network reveals dynamic modules. (PMID: 15951569) Zhang Y. … White F.M. (Mol. Cell. Proteomics 2005) 3
  3. A human protein-protein interaction network: a resource for annotating the proteome. (PMID: 16169070) Stelzl U. … Wanker E.E. (Cell 2005) 3
  4. Pragmin, a novel effector of Rnd2 GTPase, stimulates RhoA activity. (PMID: 16481321) Tanaka H. … Negishi M. (J. Biol. Chem. 2006) 3
  5. Lysine acetylation targets protein complexes and co-regulates major cellular functions. (PMID: 19608861) Choudhary C. … Mann M. (Science 2009) 3

Products for SGK223 Gene

Sources for SGK223 Gene

Back to Top

Content