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Aliases for SF3A3P1 Gene

Aliases for SF3A3P1 Gene

  • Splicing Factor 3a, Subunit 3 Pseudogene 1 2 3 5
  • Splicing Factor 3a, Subunit 3, 60kDa Pseudogene 3
  • Splicing Factor 3a, Subunit 3 Pseudogene 2
  • DJ581P3.1 3
  • SF3A3P 3

External Ids for SF3A3P1 Gene

Previous HGNC Symbols for SF3A3P1 Gene

  • SF3A3P

Previous GeneCards Identifiers for SF3A3P1 Gene

  • GC20M003419
  • GC20M003469
  • GC20M003417

Summaries for SF3A3P1 Gene

GeneCards Summary for SF3A3P1 Gene

SF3A3P1 (Splicing Factor 3a, Subunit 3 Pseudogene 1) is a Pseudogene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for SF3A3P1 Gene

Genomics for SF3A3P1 Gene

Regulatory Elements for SF3A3P1 Gene

Enhancers for SF3A3P1 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH20F003470 1.1 ENCODE 0.3 +19.0 19046 3.8 PKNOX1 CREB3L1 MLX ZFP64 ARID4B SIN3A DMAP1 YY1 SLC30A9 ZNF143 ATRN SF3A3P1
GH20F003483 0.8 Ensembl 0.4 +7.2 7227 0.8 SOX13 ELF3 SAP130 ARID4B CEBPG THRB ZNF48 ZNF644 RARA TEAD3 SF3A3P1 ATRN
GH20F003509 0.9 ENCODE 0.3 -19.1 -19079 0.8 ELF3 ARID4B THRB ZSCAN9 ZBTB40 RAD21 RARA YY1 CREM MIXL1 ENSG00000201346 SF3A3P1 GC20M003527
GH20F003541 1 ENCODE 0.2 -52.8 -52790 5.1 ATF1 MLX ARID4B DMAP1 ZNF48 YY1 SLC30A9 SP5 MXD4 MIER2 HSPA12B ATRN ITPA SF3A3P1 GC20M003527
GH20F003553 0.8 ENCODE 0.2 -63.0 -62962 0.2 SOX13 SAP130 RAD21 RARA HOMEZ MIXL1 SOX5 GATAD2A HMG20B NFIA GC20M003527 SF3A3P1
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around SF3A3P1 on UCSC Golden Path with GeneCards custom track

Genomic Location for SF3A3P1 Gene

Chromosome:
20
Start:
3,489,299 bp from pter
End:
3,491,027 bp from pter
Size:
1,729 bases
Orientation:
Minus strand

Genomic View for SF3A3P1 Gene

Genes around SF3A3P1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
SF3A3P1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for SF3A3P1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for SF3A3P1 Gene

Proteins for SF3A3P1 Gene

Post-translational modifications for SF3A3P1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for SF3A3P1 Gene

Domains & Families for SF3A3P1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for SF3A3P1 Gene

Function for SF3A3P1 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for SF3A3P1 Gene

Localization for SF3A3P1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for SF3A3P1 Gene

Pathways & Interactions for SF3A3P1 Gene

SuperPathways for SF3A3P1 Gene

No Data Available

Interacting Proteins for SF3A3P1 Gene

Gene Ontology (GO) - Biological Process for SF3A3P1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for SF3A3P1 Gene

Transcripts for SF3A3P1 Gene

mRNA/cDNA for SF3A3P1 Gene

(1) Selected AceView cDNA sequences:
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for SF3A3P1 Gene

No ASD Table

Relevant External Links for SF3A3P1 Gene

GeneLoc Exon Structure for
SF3A3P1
ECgene alternative splicing isoforms for
SF3A3P1

Expression for SF3A3P1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for SF3A3P1 Gene

mRNA differential expression in normal tissues according to GTEx for SF3A3P1 Gene

This gene is overexpressed in Brain - Cerebellum (x4.1).

NURSA nuclear receptor signaling pathways regulating expression of SF3A3P1 Gene:

SF3A3P1
genes like me logo Genes that share expression patterns with SF3A3P1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for SF3A3P1 Gene

Orthologs for SF3A3P1 Gene

Evolution for SF3A3P1 Gene

ENSEMBL:
Gene Tree for SF3A3P1 (if available)
TreeFam:
Gene Tree for SF3A3P1 (if available)

No data available for Orthologs for SF3A3P1 Gene

Paralogs for SF3A3P1 Gene

No data available for Paralogs for SF3A3P1 Gene

Variants for SF3A3P1 Gene

Relevant External Links for SF3A3P1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
SF3A3P1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for SF3A3P1 Gene

Disorders for SF3A3P1 Gene

No disorders were found for SF3A3P1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for SF3A3P1 Gene

Publications for SF3A3P1 Gene

No publications were found for SF3A3P1 Gene.

Products for SF3A3P1 Gene

Sources for SF3A3P1 Gene

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