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Aliases for SETP9 Gene

Aliases for SETP9 Gene

  • SET Pseudogene 9 2 3 5

External Ids for SETP9 Gene

Summaries for SETP9 Gene

GeneCards Summary for SETP9 Gene

SETP9 (SET Pseudogene 9) is a Pseudogene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for SETP9 Gene

Genomics for SETP9 Gene

Regulatory Elements for SETP9 Gene

Enhancers for SETP9 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH01F160662 1 Ensembl ENCODE 8.3 -5.0 -5048 5.0 ATF1 PKNOX1 ARNT WRNIP1 KLF13 NCOA1 TBX21 SMARCA4 NBN HMBOX1 ITLN1 SETP9 SLAMF1
GH01F160650 0.8 Ensembl ENCODE 8.1 -17.5 -17516 3.9 HDGF PKNOX1 PTRF CREM KLF13 SMAD5 CBFB JUNB ZEB2 HDAC8 SETP9 SLAMF1
GH01F160671 0.8 Ensembl ENCODE 7.8 +3.9 3927 4.9 HDGF PKNOX1 BMI1 RAD21 RFX5 EGR1 ZNF143 CREM EGR2 ZNF654 SETP9 ENSG00000228863 GC01P160684
GH01F160635 1.2 FANTOM5 ENCODE 5.4 -28.2 -28157 12.5 HDGF PKNOX1 ARNT WRNIP1 YBX1 ZNF766 CBX5 ZNF143 ZNF207 JUNB ENSG00000228863 SLAMF1 RPL27AP2 SETP9 PPOX SLAMF6 CD48 CD84
GH01F160656 0.9 FANTOM5 Ensembl ENCODE 0.4 -12.0 -12009 2.7 HDGF HDAC1 PKNOX1 TBL1XR1 NSD2 ZNF766 GATA2 ZNF207 ETV6 SMARCA5 SETP9 SLAMF1
- Elite enhancer/Elite enhancer-gene association Download Table
Download GeneHancer data dump

Enhancers around SETP9 on UCSC Golden Path with GeneCards custom track

Genomic Location for SETP9 Gene

Chromosome:
1
Start:
160,670,148 bp from pter
End:
160,670,981 bp from pter
Size:
834 bases
Orientation:
Plus strand

Genomic View for SETP9 Gene

Genes around SETP9 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
SETP9 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for SETP9 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for SETP9 Gene

Proteins for SETP9 Gene

Post-translational modifications for SETP9 Gene

No Post-translational modifications

No data available for DME Specific Peptides for SETP9 Gene

Domains & Families for SETP9 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for SETP9 Gene

Function for SETP9 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for SETP9 Gene

Localization for SETP9 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for SETP9 Gene

Pathways & Interactions for SETP9 Gene

SuperPathways for SETP9 Gene

No Data Available

Interacting Proteins for SETP9 Gene

Gene Ontology (GO) - Biological Process for SETP9 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for SETP9 Gene

Transcripts for SETP9 Gene

mRNA/cDNA for SETP9 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for SETP9 Gene

No ASD Table

Relevant External Links for SETP9 Gene

GeneLoc Exon Structure for
SETP9
ECgene alternative splicing isoforms for
SETP9

Expression for SETP9 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for SETP9 Gene

mRNA expression in normal human tissues for SETP9 Gene

NURSA nuclear receptor signaling pathways regulating expression of SETP9 Gene:

SETP9
genes like me logo Genes that share expression patterns with SETP9: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for SETP9 Gene

Orthologs for SETP9 Gene

Evolution for SETP9 Gene

ENSEMBL:
Gene Tree for SETP9 (if available)
TreeFam:
Gene Tree for SETP9 (if available)

No data available for Orthologs for SETP9 Gene

Paralogs for SETP9 Gene

No data available for Paralogs for SETP9 Gene

Variants for SETP9 Gene

Relevant External Links for SETP9 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
SETP9

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for SETP9 Gene

Disorders for SETP9 Gene

Relevant External Links for SETP9

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
SETP9

No disorders were found for SETP9 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for SETP9 Gene

Publications for SETP9 Gene

No publications were found for SETP9 Gene.

Products for SETP9 Gene

Sources for SETP9 Gene

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