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Aliases for SETP6 Gene

Aliases for SETP6 Gene

  • SET Pseudogene 6 2 3 5

External Ids for SETP6 Gene

Summaries for SETP6 Gene

GeneCards Summary for SETP6 Gene

SETP6 (SET Pseudogene 6) is a Pseudogene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for SETP6 Gene

Genomics for SETP6 Gene

Regulatory Elements for SETP6 Gene

Enhancers for SETP6 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH03F081684 0.2 ENCODE 0.2 -72.0 -72042 1.0 PKNOX1 ZNF316 FOXK2 NFE2 MAFK HOMEZ RNF2 BHLHE40 CEBPB MAFG GBE1 SETP6
GH03F081716 0.9 Ensembl ENCODE 0.1 -104.4 -104373 1.2 PKNOX1 MLX ARID4B FEZF1 DMAP1 YY1 SP5 MXD4 MIER2 PPARG GBE1 SETP6
GH03F081740 0.8 Ensembl ENCODE 0.1 -130.4 -130400 5.6 HDAC1 PKNOX1 ARNT TBL1XR1 CREB3L1 INSM2 SIN3A FEZF1 CHAMP1 YY1 GBE1 SETP6
GH03F081747 0.4 Ensembl 0.1 -134.8 -134796 0.4 MTA2 EBF1 TBX21 EP300 RAD51 IKZF1 NBN MLLT1 EMSY GBE1 SETP6
GH03F081757 0.5 Ensembl ENCODE 0.1 -147.2 -147170 5.7 HDGF PKNOX1 CREB3L1 MLX WRNIP1 ARID4B SIN3A FEZF1 DMAP1 ZNF2 GBE1 SETP6
- Elite enhancer/Elite enhancer-gene association Download Table
Download GeneHancer data dump

Enhancers around SETP6 on UCSC Golden Path with GeneCards custom track

Genomic Location for SETP6 Gene

Chromosome:
3
Start:
81,612,238 bp from pter
End:
81,612,805 bp from pter
Size:
568 bases
Orientation:
Minus strand

Genomic View for SETP6 Gene

Genes around SETP6 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
SETP6 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for SETP6 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for SETP6 Gene

Proteins for SETP6 Gene

Post-translational modifications for SETP6 Gene

No Post-translational modifications

No data available for DME Specific Peptides for SETP6 Gene

Domains & Families for SETP6 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for SETP6 Gene

Function for SETP6 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for SETP6 Gene

Localization for SETP6 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for SETP6 Gene

Pathways & Interactions for SETP6 Gene

SuperPathways for SETP6 Gene

No Data Available

Interacting Proteins for SETP6 Gene

Gene Ontology (GO) - Biological Process for SETP6 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for SETP6 Gene

Transcripts for SETP6 Gene

mRNA/cDNA for SETP6 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for SETP6 Gene

No ASD Table

Relevant External Links for SETP6 Gene

GeneLoc Exon Structure for
SETP6
ECgene alternative splicing isoforms for
SETP6

Expression for SETP6 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for SETP6 Gene

mRNA expression in normal human tissues for SETP6 Gene

NURSA nuclear receptor signaling pathways regulating expression of SETP6 Gene:

SETP6
genes like me logo Genes that share expression patterns with SETP6: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for SETP6 Gene

Orthologs for SETP6 Gene

Evolution for SETP6 Gene

ENSEMBL:
Gene Tree for SETP6 (if available)
TreeFam:
Gene Tree for SETP6 (if available)

No data available for Orthologs for SETP6 Gene

Paralogs for SETP6 Gene

No data available for Paralogs for SETP6 Gene

Variants for SETP6 Gene

Relevant External Links for SETP6 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
SETP6

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for SETP6 Gene

Disorders for SETP6 Gene

Relevant External Links for SETP6

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
SETP6

No disorders were found for SETP6 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for SETP6 Gene

Publications for SETP6 Gene

No publications were found for SETP6 Gene.

Products for SETP6 Gene

Sources for SETP6 Gene

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