Free for academic non-profit institutions. Other users need a Commercial license

Aliases for SETP4 Gene

Aliases for SETP4 Gene

  • SET Pseudogene 4 2 3 5
  • SET Translocation (Myeloid Leukemia-Associated) Pseudogene 3
  • HCG1644608 3

External Ids for SETP4 Gene

Previous GeneCards Identifiers for SETP4 Gene

  • GC0XP084012

Summaries for SETP4 Gene

GeneCards Summary for SETP4 Gene

SETP4 (SET Pseudogene 4) is a Pseudogene.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for SETP4 Gene

Genomics for SETP4 Gene

Regulatory Elements for SETP4 Gene

Enhancers for SETP4 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH0XG084734 0.6 ENCODE 0.4 -19.9 -19864 1.1 GATAD2A ZNF146 ZNF280D ZNF680 TEAD1 HLF CEBPG TEAD3 CEBPA TRIM28 TEX16P SETP4
GH0XG084737 0.4 ENCODE 0.4 -17.3 -17336 0.7 ATF2 TEX16P SETP4
GH0XG084743 0.3 FANTOM5 0.4 -11.3 -11316 0.0 SETP4 TEX16P
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around SETP4 on UCSC Golden Path with GeneCards custom track

Genomic Location for SETP4 Gene

Chromosome:
X
Start:
84,754,998 bp from pter
End:
84,756,477 bp from pter
Size:
1,480 bases
Orientation:
Plus strand

Genomic View for SETP4 Gene

Genes around SETP4 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
SETP4 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for SETP4 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for SETP4 Gene

Proteins for SETP4 Gene

Post-translational modifications for SETP4 Gene

No Post-translational modifications

No data available for DME Specific Peptides for SETP4 Gene

Domains & Families for SETP4 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for SETP4 Gene

Function for SETP4 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for SETP4 Gene

Localization for SETP4 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for SETP4 Gene

Pathways & Interactions for SETP4 Gene

SuperPathways for SETP4 Gene

No Data Available

Interacting Proteins for SETP4 Gene

Gene Ontology (GO) - Biological Process for SETP4 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for SETP4 Gene

Drugs & Compounds for SETP4 Gene

No Compound Related Data Available

Transcripts for SETP4 Gene

mRNA/cDNA for SETP4 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for SETP4 Gene

No ASD Table

Relevant External Links for SETP4 Gene

GeneLoc Exon Structure for
SETP4
ECgene alternative splicing isoforms for
SETP4

Expression for SETP4 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for SETP4 Gene

NURSA nuclear receptor signaling pathways regulating expression of SETP4 Gene:

SETP4
genes like me logo Genes that share expression patterns with SETP4: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for SETP4 Gene

Orthologs for SETP4 Gene

Evolution for SETP4 Gene

ENSEMBL:
Gene Tree for SETP4 (if available)
TreeFam:
Gene Tree for SETP4 (if available)

No data available for Orthologs for SETP4 Gene

Paralogs for SETP4 Gene

No data available for Paralogs for SETP4 Gene

Variants for SETP4 Gene

Relevant External Links for SETP4 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
SETP4

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for SETP4 Gene

Disorders for SETP4 Gene

Relevant External Links for SETP4

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
SETP4

No disorders were found for SETP4 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for SETP4 Gene

Publications for SETP4 Gene

  1. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 3 64
  2. The sequence of the human genome. (PMID: 11181995) Venter J.C. … Zhu X. (Science 2001) 3 64

Products for SETP4 Gene

Sources for SETP4 Gene

Content
Loading form....