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Aliases for SETP3 Gene

Aliases for SETP3 Gene

  • SET Pseudogene 3 2 3 5
  • SET Translocation, Pseudogene 3 2 3
  • SET Pseudogene 13 2 3
  • SETP13 3

External Ids for SETP3 Gene

Previous HGNC Symbols for SETP3 Gene

  • SETP13

Previous GeneCards Identifiers for SETP3 Gene

  • GC17U900599

Summaries for SETP3 Gene

GeneCards Summary for SETP3 Gene

SETP3 (SET Pseudogene 3) is a Pseudogene.

Additional gene information for SETP3 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for SETP3 Gene

Genomics for SETP3 Gene

Regulatory Elements for SETP3 Gene

Enhancers for SETP3 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH17H058005 2.4 ENCODE dbSUPER 14.6 +470.6 470598 4 MLX ZFP64 YBX1 FEZF1 DMAP1 YY1 SLC30A9 ZNF143 SP3 NFYC SRSF1 MKS1 TEX14 ENSG00000264914 OR4D1 SETP3 LOC101927557 VEZF1 RAD51C CCDC182
GH17H058658 2.1 FANTOM5 Ensembl ENCODE dbSUPER 14.6 -181.9 -181909 2 MLX ZFP64 FEZF1 DMAP1 YY1 SLC30A9 ZNF143 SP3 NFYC ZC3H11A SRSF1 MKS1 TRIM37 SMG8 RAD51C DHX40 SETP3 OR4D1 SPDYE22P ENSG00000264914
GH17H057983 1.8 FANTOM5 ENCODE dbSUPER 14.6 +489.5 489490 7 HDGF PKNOX1 FOXA2 MLX ARID4B SIN3A DMAP1 ZNF2 ZBTB7B YY1 MKS1 TEX14 SRSF1 ENSG00000264914 OR4D1 LOC101927557 SETP3 CCDC182 LOC101927666 VEZF1
GH17H057602 1.8 FANTOM5 Ensembl ENCODE dbSUPER 14.6 +870.7 870749 7 FOXA2 ATF1 MLX ARID4B FEZF1 DMAP1 ZNF143 FOS ATF7 RUNX3 CCDC182 LOC101927557 ENSG00000264914 OR4D1 LOC100419768 SETP3 MSI2 LOC101927539 ENSG00000280028
GH17H058351 1.4 ENCODE dbSUPER 14.7 +123.9 123913 3 HDGF PKNOX1 FOXA2 ZFP64 ARID4B SIN3A YBX1 DMAP1 ZNF2 YY1 TSPOAP1 SUPT4H1 SETP3 OR4D1 ENSG00000264914 LOC101927557 SPDYE22P RAD51C TEX14 SRSF1
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around SETP3 on UCSC Golden Path with GeneCards custom track

Genomic Location for SETP3 Gene

Chromosome:
17
Start:
58,475,991 bp from pter
End:
58,477,102 bp from pter
Size:
1,112 bases
Orientation:
Minus strand

Genomic View for SETP3 Gene

Genes around SETP3 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
SETP3 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for SETP3 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for SETP3 Gene

Proteins for SETP3 Gene

Post-translational modifications for SETP3 Gene

No Post-translational modifications

No data available for DME Specific Peptides for SETP3 Gene

Domains & Families for SETP3 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for SETP3 Gene

Function for SETP3 Gene

Phenotypes From GWAS Catalog for SETP3 Gene

Animal Model Products

CRISPR Products

Clone Products

  • Applied Biological Materials Clones for SETP3
  • Vectors and viruses for ORF, Lenti, Retro, Adenovirus, AAV, and more

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for SETP3 Gene

Localization for SETP3 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for SETP3 Gene

Pathways & Interactions for SETP3 Gene

SuperPathways for SETP3 Gene

No Data Available

Interacting Proteins for SETP3 Gene

Gene Ontology (GO) - Biological Process for SETP3 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for SETP3 Gene

Drugs & Compounds for SETP3 Gene

No Compound Related Data Available

Transcripts for SETP3 Gene

mRNA/cDNA for SETP3 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

CRISPR Products

Clone Products

  • Applied Biological Materials Clones for SETP3
  • Vectors and viruses for ORF, Lenti, Retro, Adenovirus, AAV, and more

Alternative Splicing Database (ASD) splice patterns (SP) for SETP3 Gene

No ASD Table

Relevant External Links for SETP3 Gene

GeneLoc Exon Structure for
SETP3
ECgene alternative splicing isoforms for
SETP3

Expression for SETP3 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for SETP3 Gene

NURSA nuclear receptor signaling pathways regulating expression of SETP3 Gene:

SETP3
genes like me logo Genes that share expression patterns with SETP3: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for SETP3 Gene

Orthologs for SETP3 Gene

Evolution for SETP3 Gene

ENSEMBL:
Gene Tree for SETP3 (if available)
TreeFam:
Gene Tree for SETP3 (if available)

No data available for Orthologs for SETP3 Gene

Paralogs for SETP3 Gene

No data available for Paralogs for SETP3 Gene

Variants for SETP3 Gene

Relevant External Links for SETP3 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
SETP3

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for SETP3 Gene

Disorders for SETP3 Gene

Relevant External Links for SETP3

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
SETP3

No disorders were found for SETP3 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for SETP3 Gene

Publications for SETP3 Gene

No publications were found for SETP3 Gene.

Products for SETP3 Gene

Sources for SETP3 Gene

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