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Aliases for SETP22 Gene

Aliases for SETP22 Gene

  • SET Pseudogene 22 2 3 5

External Ids for SETP22 Gene

Previous GeneCards Identifiers for SETP22 Gene

  • GC05M096390

Summaries for SETP22 Gene

GeneCards Summary for SETP22 Gene

SETP22 (SET Pseudogene 22) is a Pseudogene.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for SETP22 Gene

Genomics for SETP22 Gene

Regulatory Elements for SETP22 Gene

Enhancers for SETP22 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH05G097044 0.7 ENCODE 0.4 +13.2 13179 0.0 ELF3 CTCF TEAD1 TEAD4 REST ZNF644 RAD21 TEAD3 ZNF316 IKZF1 LIX1 ERAP1 ENSG00000248734 SETP22 GC05P096972
GH05G097045 0.7 ENCODE 0.4 +13.1 13097 0.1 ELF3 CTCF TEAD1 TEAD4 TEAD2 REST ZNF644 RAD21 TEAD3 ZNF316 LIX1 ERAP1 ENSG00000248734 SETP22 GC05P096972
GH05G097070 0.7 ENCODE 0.4 -14.1 -14134 2.4 PKNOX1 ATF1 L3MBTL2 TAF1 MAFG ATF2 FOXM1 ZNF316 GATA2 PBX2 LIX1 LIX1-AS1 SETP22
GH05G097008 1.3 Ensembl ENCODE dbSUPER 0.2 +47.8 47789 1.2 HDAC1 RAD21 ZNF766 GATA2 DEK MIXL1 ZNF654 REST POLR2H NFIC ERAP2 ENSG00000247121 LIX1 GC05P096972 SETP22
GH05G097043 0.4 ENCODE 0.4 +13.7 13713 0.7 IKZF1 REST LIX1 ERAP1 ENSG00000248734 SETP22 GC05P096972
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around SETP22 on UCSC Golden Path with GeneCards custom track

Genomic Location for SETP22 Gene

Chromosome:
5
Start:
97,054,683 bp from pter
End:
97,057,358 bp from pter
Size:
2,676 bases
Orientation:
Minus strand

Genomic View for SETP22 Gene

Genes around SETP22 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
SETP22 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for SETP22 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for SETP22 Gene

Proteins for SETP22 Gene

Post-translational modifications for SETP22 Gene

No Post-translational modifications

No data available for DME Specific Peptides for SETP22 Gene

Domains & Families for SETP22 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for SETP22 Gene

Function for SETP22 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for SETP22 Gene

Localization for SETP22 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for SETP22 Gene

Pathways & Interactions for SETP22 Gene

SuperPathways for SETP22 Gene

No Data Available

Interacting Proteins for SETP22 Gene

Gene Ontology (GO) - Biological Process for SETP22 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for SETP22 Gene

Drugs & Compounds for SETP22 Gene

No Compound Related Data Available

Transcripts for SETP22 Gene

mRNA/cDNA for SETP22 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for SETP22 Gene

No ASD Table

Relevant External Links for SETP22 Gene

GeneLoc Exon Structure for
SETP22
ECgene alternative splicing isoforms for
SETP22

Expression for SETP22 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for SETP22 Gene

NURSA nuclear receptor signaling pathways regulating expression of SETP22 Gene:

SETP22
genes like me logo Genes that share expression patterns with SETP22: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for SETP22 Gene

Orthologs for SETP22 Gene

Evolution for SETP22 Gene

ENSEMBL:
Gene Tree for SETP22 (if available)
TreeFam:
Gene Tree for SETP22 (if available)

No data available for Orthologs for SETP22 Gene

Paralogs for SETP22 Gene

No data available for Paralogs for SETP22 Gene

Variants for SETP22 Gene

Relevant External Links for SETP22 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
SETP22

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for SETP22 Gene

Disorders for SETP22 Gene

Relevant External Links for SETP22

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
SETP22

No disorders were found for SETP22 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for SETP22 Gene

Publications for SETP22 Gene

No publications were found for SETP22 Gene.

Products for SETP22 Gene

Sources for SETP22 Gene

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