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Aliases for SETP2 Gene

Aliases for SETP2 Gene

  • SET Pseudogene 2 2 3 5

External Ids for SETP2 Gene

Previous GeneCards Identifiers for SETP2 Gene

  • GC14U900039
  • GC14P049893
  • GC14P049894
  • GC14P050972
  • GC14P051902

Summaries for SETP2 Gene

GeneCards Summary for SETP2 Gene

SETP2 (SET Pseudogene 2) is a Pseudogene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for SETP2 Gene

Genomics for SETP2 Gene

Regulatory Elements for SETP2 Gene

Enhancers for SETP2 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH14F051429 1.1 FANTOM5 Ensembl ENCODE 0.4 -5.2 -5237 2.4 PKNOX1 SMARCA4 ATF3 EBF1 RAD21 TRIM9 SETP2 GC14P051436 LOC105370496
GH14F051441 0.9 Ensembl ENCODE 0.4 +7.2 7234 4.2 CTCF JUND BHLHE40 SIN3A FOS PRDM1 RAD21 NFE2L2 FRMD6 RNU6-301P SETP2 GC14P051436
GH14F051448 0.9 Ensembl ENCODE 0.4 +13.2 13220 1.8 RAD21 NR2F2 JUND ATF3 POLR2A SMARCA4 HNF4G MAFK RNU6-1291P FRMD6 ABHD12B GC14P051436 SETP2
GH14F051423 0.7 Ensembl ENCODE 0.4 -11.3 -11290 2.0 RAD21 ATF2 NR2F2 FRMD6 GC14P051436 SETP2 LOC105370496
GH14F051419 0.6 ENCODE 0.3 -16.1 -16060 1.1 RAD51 USF1 USF2 NFE2 MNT REST ZBTB40 GABPA SETP2 GC14P051436 LOC105370496
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around SETP2 on UCSC Golden Path with GeneCards custom track

Genomic Location for SETP2 Gene

51,436,038 bp from pter
51,439,313 bp from pter
3,276 bases
Plus strand

Genomic View for SETP2 Gene

Genes around SETP2 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
SETP2 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for SETP2 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for SETP2 Gene

Proteins for SETP2 Gene

Post-translational modifications for SETP2 Gene

No Post-translational modifications

No data available for DME Specific Peptides for SETP2 Gene

Domains & Families for SETP2 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for SETP2 Gene

Function for SETP2 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for SETP2 Gene

Localization for SETP2 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for SETP2 Gene

Pathways & Interactions for SETP2 Gene

SuperPathways for SETP2 Gene

No Data Available

Interacting Proteins for SETP2 Gene

Gene Ontology (GO) - Biological Process for SETP2 Gene


No data available for Pathways by source and SIGNOR curated interactions for SETP2 Gene

Transcripts for SETP2 Gene

mRNA/cDNA for SETP2 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for SETP2 Gene

No ASD Table

Relevant External Links for SETP2 Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for SETP2 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for SETP2 Gene

mRNA differential expression in normal tissues according to GTEx for SETP2 Gene

This gene is overexpressed in Uterus (x17.6), Cervix - Ectocervix (x11.0), Fallopian Tube (x7.5), and Cervix - Endocervix (x7.1).

NURSA nuclear receptor signaling pathways regulating expression of SETP2 Gene:

genes like me logo Genes that share expression patterns with SETP2: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for SETP2 Gene

Orthologs for SETP2 Gene

Evolution for SETP2 Gene

Gene Tree for SETP2 (if available)
Gene Tree for SETP2 (if available)

No data available for Orthologs for SETP2 Gene

Paralogs for SETP2 Gene

No data available for Paralogs for SETP2 Gene

Variants for SETP2 Gene

Relevant External Links for SETP2 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for SETP2 Gene

Disorders for SETP2 Gene

Relevant External Links for SETP2

Genetic Association Database (GAD)

No disorders were found for SETP2 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for SETP2 Gene

Publications for SETP2 Gene

  1. Genome-wide association with MRI atrophy measures as a quantitative trait locus for Alzheimer's disease. (PMID: 21116278) Furney S.J. … . (Mol. Psychiatry 2011) 46 64

Products for SETP2 Gene

Sources for SETP2 Gene

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