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Aliases for SETP11 Gene

Subcategory (RNA class) for SETP11 Gene


Aliases for SETP11 Gene

  • SET Pseudogene 11 2 3 5

External Ids for SETP11 Gene

ORGUL Members for SETP11 Gene

Previous GeneCards Identifiers for SETP11 Gene

  • GC03P150989

Summaries for SETP11 Gene

GeneCards Summary for SETP11 Gene

SETP11 (SET Pseudogene 11) is a Pseudogene, and is affiliated with the antisense RNA class.

fRNAdb sequence ontologies for SETP11 Gene

  • nc_conserved_region: Non-coding region of sequence similarity by descent from a common ancestor.

View fRNAdb secondary structures for SETP11

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for SETP11 Gene

Genomics for SETP11 Gene

Regulatory Elements for SETP11 Gene

Enhancers for SETP11 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH03G151264 1.4 FANTOM5 Ensembl ENCODE dbSUPER 0.7 -3.5 -3540 2.2 MXI1 RFX1 BMI1 EBF1 EP300 SPI1 P2RY14 GPR87 SETP11 GC03P151250
GH03G151268 0.7 ENCODE dbSUPER 0.7 -0.7 -654 0.9 CBX5 NR2F1 IKZF1 SETP11 GC03P151250
GH03G151269 0.5 FANTOM5 dbSUPER 0.7 +0.2 226 0.4 P2RY12 MED12L SETP11 GC03P151277
GH03G151256 0.6 dbSUPER 0.4 -12.0 -12016 2.4 ZNF589 MXI1 ZNF175 SMC3 CEBPG ZNF584 EP300 P2RY14 GC03P151250 SETP11
GH03G151259 0.5 ENCODE dbSUPER 0.4 -10.0 -9964 0.1 GC03P151250 SETP11
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around SETP11 on UCSC Golden Path with GeneCards custom track

Genomic Location for SETP11 Gene

151,269,438 bp from pter
151,270,131 bp from pter
694 bases
Plus strand

Genomic View for SETP11 Gene

Genes around SETP11 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
SETP11 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for SETP11 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for SETP11 Gene

ORGUL Member Location for SETP11 Gene

ORGUL Member Location for SETP11 gene

Proteins for SETP11 Gene

Post-translational modifications for SETP11 Gene

No Post-translational modifications

No data available for DME Specific Peptides for SETP11 Gene

Domains & Families for SETP11 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for SETP11 Gene

Function for SETP11 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for SETP11 Gene

Localization for SETP11 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for SETP11 Gene

Pathways & Interactions for SETP11 Gene

SuperPathways for SETP11 Gene

No Data Available

Interacting Proteins for SETP11 Gene

Gene Ontology (GO) - Biological Process for SETP11 Gene


No data available for Pathways by source and SIGNOR curated interactions for SETP11 Gene

Drugs & Compounds for SETP11 Gene

No Compound Related Data Available

Transcripts for SETP11 Gene

fRNAdb Secondary structures for SETP11 Gene

  • FR184000

mRNA/cDNA for SETP11 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for SETP11 Gene

No ASD Table

Relevant External Links for SETP11 Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for SETP11 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for SETP11 Gene

NURSA nuclear receptor signaling pathways regulating expression of SETP11 Gene:

genes like me logo Genes that share expression patterns with SETP11: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for SETP11 Gene

Orthologs for SETP11 Gene

Evolution for SETP11 Gene

Gene Tree for SETP11 (if available)
Gene Tree for SETP11 (if available)

No data available for Orthologs for SETP11 Gene

Paralogs for SETP11 Gene

No data available for Paralogs for SETP11 Gene

Variants for SETP11 Gene

Relevant External Links for SETP11 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for SETP11 Gene

Disorders for SETP11 Gene

Relevant External Links for SETP11

Atlas of Genetics and Cytogenetics in Oncology and Haematology:

No disorders were found for SETP11 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for SETP11 Gene

Publications for SETP11 Gene

  1. Identification and classification of conserved RNA secondary structures in the human genome. (PMID: 16628248) Pedersen J.S. … Haussler D. (PLoS Comput. Biol. 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang K.C. … Mattick J.S. (Nucleic Acids Res. 2005) 1

Products for SETP11 Gene

Sources for SETP11 Gene

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