Free for academic non-profit institutions. Other users need a Commercial license

Aliases for SETD8P1 Gene

Aliases for SETD8P1 Gene

  • SET Domain Containing 8 Pseudogene 1 2 3
  • PR/SET Domain Containing Protein 07 Pseudogene 3
  • SET07p 3
  • SET7 3

External Ids for SETD8P1 Gene

Summaries for SETD8P1 Gene

GeneCards Summary for SETD8P1 Gene

SETD8P1 (SET Domain Containing 8 Pseudogene 1) is a Pseudogene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for SETD8P1 Gene

Genomics for SETD8P1 Gene

Genomic Location for SETD8P1 Gene

Start:
18,297,404 bp from pter
End:
18,300,377 bp from pter
Size:
2,974 bases
Orientation:
Plus strand

Genomic View for SETD8P1 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for SETD8P1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for SETD8P1 Gene

No data available for Regulatory Elements for SETD8P1 Gene

Proteins for SETD8P1 Gene

Post-translational modifications for SETD8P1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for SETD8P1 Gene

Domains for SETD8P1 Gene

No data available for Gene Families , Protein Domains and UniProtKB/Swiss-Prot for SETD8P1 Gene

Function for SETD8P1 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for SETD8P1 Gene

Localization for SETD8P1 Gene

No data available for Gene Ontology (GO) - Cellular Components for SETD8P1 Gene

Pathways for SETD8P1 Gene

SuperPathways for SETD8P1 Gene

No Data Available

Interacting Proteins for SETD8P1 Gene

Gene Ontology (GO) - Biological Process for SETD8P1 Gene

None

No data available for Pathways by source for SETD8P1 Gene

Transcripts for SETD8P1 Gene

mRNA/cDNA for SETD8P1 Gene

(13) Selected AceView cDNA sequences:
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for SETD8P1 Gene

No ASD Table

Relevant External Links for SETD8P1 Gene

GeneLoc Exon Structure for
SETD8P1
ECgene alternative splicing isoforms for
SETD8P1

Expression for SETD8P1 Gene

No Expression Related Data Available

Orthologs for SETD8P1 Gene

This gene was present in the common ancestor of chordates.

Orthologs for SETD8P1 Gene

Organism Taxonomy Gene Similarity Type Details
rainbow trout
(Oncorhynchus mykiss)
Actinopterygii Omy.9122 36
Species with no ortholog for SETD8P1:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • chimpanzee (Pan troglodytes)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • cow (Bos Taurus)
  • dog (Canis familiaris)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • mouse (Mus musculus)
  • oppossum (Monodelphis domestica)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for SETD8P1 Gene

ENSEMBL:
Gene Tree for SETD8P1 (if available)
TreeFam:
Gene Tree for SETD8P1 (if available)

Paralogs for SETD8P1 Gene

No data available for Paralogs for SETD8P1 Gene

Variants for SETD8P1 Gene

Relevant External Links for SETD8P1 Gene

HapMap Linkage Disequilibrium report
SETD8P1

No data available for Sequence variations from dbSNP and Humsavar and Structural Variations from Database of Genomic Variants (DGV) for SETD8P1 Gene

Disorders for SETD8P1 Gene

No disorders were found for SETD8P1 Gene.

No data available for UniProtKB/Swiss-Prot for SETD8P1 Gene

Publications for SETD8P1 Gene

  1. Toward a complete human genome sequence. (PMID: 9847074) Sulston J.E. … Waterston R. (Genome Res. 1998) 3
  2. PR-Set7 is a nucleosome-specific methyltransferase that modifies lysine 20 of histone H4 and is associated with silent chromatin. (PMID: 12086618) Nishioka K. … Reinberg D. (Mol. Cell 2002) 3
  3. Mitotic-specific methylation of histone H4 Lys 20 follows increased PR-Set7 expression and its localization to mitotic chromosomes. (PMID: 12208845) Rice J.C. … Allis C.D. (Genes Dev. 2002) 3
  4. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 3

Products for SETD8P1 Gene

Sources for SETD8P1 Gene

Back to Top

Content