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Aliases for SERTAD3 Gene

Aliases for SERTAD3 Gene

  • SERTA Domain Containing 3 2 3 5
  • RPA-Binding Trans-Activator 2 3 4
  • Replication Protein-Binding Trans-Activator 3 4
  • RBT1 3 4
  • SERTA Domain-Containing Protein 3 3

External Ids for SERTAD3 Gene

Previous GeneCards Identifiers for SERTAD3 Gene

  • GC19M045639
  • GC19M045640
  • GC19M040946
  • GC19M037383

Summaries for SERTAD3 Gene

Entrez Gene Summary for SERTAD3 Gene

  • The protein encoded by this gene was identified in a yeast two-hybrid assay employing the second subunit of human replication protein A as bait. It is localized to the nucleus and its expression is significantly higher in cancer cell lines compared to normal cell lines. This protein has also been shown to be a strong transcriptional co-activator. Alternative splicing has been observed at this locus and two variants, both encoding the same protein, have been identified. [provided by RefSeq, Jul 2008]

GeneCards Summary for SERTAD3 Gene

SERTAD3 (SERTA Domain Containing 3) is a Protein Coding gene. Diseases associated with SERTAD3 include Amyotrophic Lateral Sclerosis 1.

UniProtKB/Swiss-Prot for SERTAD3 Gene

  • Strong transcriptional coactivator.

No data available for Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for SERTAD3 Gene

Genomics for SERTAD3 Gene

Regulatory Elements for SERTAD3 Gene

Enhancers for SERTAD3 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH19F040414 1.8 FANTOM5 Ensembl ENCODE 37.3 +28.1 28052 3.7 MLX FEZF1 YY1 SLC30A9 ZNF143 ZNF416 ZNF548 ZNF263 SP3 TBX21 SNRPA ENSG00000269843 FBL CCDC97 SERTAD3 ITPKC ENSG00000205041 COQ8B ENSG00000269069 ENSG00000268366
GH19F040431 1.8 FANTOM5 Ensembl ENCODE 34.2 +10.6 10642 4.3 HDGF PKNOX1 ARNT ARID4B SIN3A DMAP1 ZNF2 YY1 ZNF416 ZNF548 SNRPA SERTAD3 ENSG00000269843 FBL ITPKC RPS16 CCDC97 CYP2F2P SUPT5H ENSG00000268366
GH19F040420 1.7 FANTOM5 Ensembl ENCODE 30.6 +21.2 21174 6.7 CREB3L1 MLX FEZF1 DMAP1 YY1 SLC30A9 ZNF143 ZNF263 SP3 NFYC SERTAD3 SNRPA PSMC4 FBL CCDC97 ITPKC ZNF546 ENSG00000269069 ENSG00000269843 EID2B
GH19F041294 1.8 FANTOM5 Ensembl ENCODE 27.4 -858.6 -858592 16.8 CREB3L1 MLX ZFP64 YBX1 FEZF1 DMAP1 YY1 ZNF416 ZNF143 ZNF548 ZNF526 SNRPA ENSG00000269843 ZNF574 CCDC97 ITPKC TGFB1 SERTAD3 TMEM91 ENSG00000268366
GH19F040462 1.5 FANTOM5 ENCODE 31.2 -20.5 -20508 4.5 FEZF1 YY1 ZNF416 ZNF143 ZNF548 ZNF263 SP3 NFYC TBX21 GLIS1 ENSG00000269843 SNRPA ENSG00000205041 SERTAD3 ENSG00000269069 CYP2G2P ENSG00000271299 ENSG00000269188 LGALS14 ENSG00000269792
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around SERTAD3 on UCSC Golden Path with GeneCards custom track

Promoters for SERTAD3 Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters

Genomic Location for SERTAD3 Gene

40,440,841 bp from pter
40,444,705 bp from pter
3,865 bases
Minus strand

Genomic View for SERTAD3 Gene

Genes around SERTAD3 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
SERTAD3 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for SERTAD3 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for SERTAD3 Gene

Proteins for SERTAD3 Gene

  • Protein details for SERTAD3 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Recommended name:
    SERTA domain-containing protein 3
    Protein Accession:
    Secondary Accessions:
    • B3KQB3
    • Q96CQ2

    Protein attributes for SERTAD3 Gene

    196 amino acids
    Molecular mass:
    21769 Da
    Quaternary structure:
    • Interacts with RPA2.

neXtProt entry for SERTAD3 Gene

Post-translational modifications for SERTAD3 Gene

  • Modification sites at PhosphoSitePlus
  • Modification sites at neXtProt

Other Protein References for SERTAD3 Gene

No data available for DME Specific Peptides for SERTAD3 Gene

Domains & Families for SERTAD3 Gene

Protein Domains for SERTAD3 Gene


Suggested Antigen Peptide Sequences for SERTAD3 Gene

GenScript: Design optimal peptide antigens:

Graphical View of Domain Structure for InterPro Entry



  • Contains 1 SERTA domain.
  • Contains 1 SERTA domain.
genes like me logo Genes that share domains with SERTAD3: view

No data available for Gene Families for SERTAD3 Gene

Function for SERTAD3 Gene

Molecular function for SERTAD3 Gene

UniProtKB/Swiss-Prot Function:
Strong transcriptional coactivator.

Gene Ontology (GO) - Molecular Function for SERTAD3 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005515 protein binding IPI 10982866
genes like me logo Genes that share ontologies with SERTAD3: view
genes like me logo Genes that share phenotypes with SERTAD3: view

Animal Model Products

Inhibitory RNA Products

Flow Cytometry Products

No data available for Enzyme Numbers (IUBMB) , Human Phenotype Ontology , Animal Models , Transcription Factor Targets and HOMER Transcription for SERTAD3 Gene

Localization for SERTAD3 Gene

Subcellular locations from UniProtKB/Swiss-Prot for SERTAD3 Gene

Subcellular locations from

Extracellular space Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi Apparatus Nucleus Mitochondrion 0 1 2 3 4 5 Confidence
COMPARTMENTS Subcellular localization image for SERTAD3 gene
Compartment Confidence
nucleus 5
cytosol 2

Gene Ontology (GO) - Cellular Components for SERTAD3 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005634 nucleus IEA,IDA 10982866
GO:0005730 nucleolus IDA --
genes like me logo Genes that share ontologies with SERTAD3: view

Pathways & Interactions for SERTAD3 Gene

SuperPathways for SERTAD3 Gene

No Data Available

Gene Ontology (GO) - Biological Process for SERTAD3 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0006351 transcription, DNA-templated IEA --
GO:0006355 regulation of transcription, DNA-templated IEA,IDA 10982866
GO:0030308 negative regulation of cell growth IDA 16098148
GO:0045893 positive regulation of transcription, DNA-templated IEA --
genes like me logo Genes that share ontologies with SERTAD3: view

No data available for Pathways by source and SIGNOR curated interactions for SERTAD3 Gene

Transcripts for SERTAD3 Gene

Unigene Clusters for SERTAD3 Gene

SERTA domain containing 3:
Representative Sequences:

Inhibitory RNA Products

Flow Cytometry Products

Alternative Splicing Database (ASD) splice patterns (SP) for SERTAD3 Gene

ExUns: 1a · 1b · 1c ^ 2 ^ 3a · 3b · 3c ^ 4a · 4b · 4c
SP1: - -
SP2: - - -
SP3: - - - -
SP4: - - -

Relevant External Links for SERTAD3 Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for SERTAD3 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for SERTAD3 Gene

NURSA nuclear receptor signaling pathways regulating expression of SERTAD3 Gene:


SOURCE GeneReport for Unigene cluster for SERTAD3 Gene:

genes like me logo Genes that share expression patterns with SERTAD3: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for SERTAD3 Gene

Orthologs for SERTAD3 Gene

This gene was present in the common ancestor of mammals.

Orthologs for SERTAD3 Gene

Organism Taxonomy Gene Similarity Type Details
(Pan troglodytes)
Mammalia SERTAD3 34 35
  • 99.83 (n)
(Bos Taurus)
Mammalia SERTAD3 34 35
  • 88.78 (n)
(Canis familiaris)
Mammalia SERTAD3 34 35
  • 88.21 (n)
(Rattus norvegicus)
Mammalia Sertad3 34
  • 84.1 (n)
(Mus musculus)
Mammalia Sertad3 34 16 35
  • 83.76 (n)
Species where no ortholog for SERTAD3 was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • oppossum (Monodelphis domestica)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for SERTAD3 Gene

Gene Tree for SERTAD3 (if available)
Gene Tree for SERTAD3 (if available)

Paralogs for SERTAD3 Gene

No data available for Paralogs for SERTAD3 Gene

Variants for SERTAD3 Gene

Sequence variations from dbSNP and Humsavar for SERTAD3 Gene

SNP ID Clin Chr 19 pos Sequence Context AA Info Type
rs10419182 -- 40,440,775(+) TGGTG(C/G)TGATG downstream-variant-500B
rs10560834 -- 40,441,467(+) GGAAG(-/GATC)GATCC upstream-variant-2KB, utr-variant-3-prime
rs1058041 -- 40,440,938(-) CATGC(C/T)GGGTT utr-variant-3-prime
rs10660252 -- 40,440,902(+) AAAAA(-/A/AAAA)GCCAC utr-variant-3-prime
rs11083556 -- 40,445,498(+) ggttg(A/G)ggttg downstream-variant-500B, upstream-variant-2KB

Structural Variations from Database of Genomic Variants (DGV) for SERTAD3 Gene

Variant ID Type Subtype PubMed ID
nsv819017 CNV loss 19587683
nsv833831 CNV loss 17160897

Variation tolerance for SERTAD3 Gene

Residual Variation Intolerance Score: 27.8% of all genes are more intolerant (likely to be disease-causing)
Gene Damage Index Score: 0.36; 7.96% of all genes are more intolerant (likely to be disease-causing)

Relevant External Links for SERTAD3 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for SERTAD3 Gene

Disorders for SERTAD3 Gene

MalaCards: The human disease database

(1) MalaCards diseases for SERTAD3 Gene - From: DISEASES

Disorder Aliases PubMed IDs
amyotrophic lateral sclerosis 1
  • amyotrophic lateral sclerosis
- elite association - COSMIC cancer census association via MalaCards

Relevant External Links for SERTAD3

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
genes like me logo Genes that share disorders with SERTAD3: view

No data available for UniProtKB/Swiss-Prot and Genatlas for SERTAD3 Gene

Publications for SERTAD3 Gene

  1. RBT1, a novel transcriptional co-activator, binds the second subunit of replication protein A. (PMID: 10982866) Cho J.M. … Alaoui-Jamali M.A. (Nucleic Acids Res. 2000) 2 3 4 22 64
  2. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PMID: 15489334) Gerhard D.S. … Malek J. (Genome Res. 2004) 3 4 64
  3. TRIP-Br: a novel family of PHD zinc finger- and bromodomain- interacting proteins that regulate the transcriptional activity of E2F-1/DP-1. (PMID: 11331592) Hsu S.-I. … Bonventre J.V. (EMBO J. 2001) 2 3 64
  4. Protein interaction network of alternatively spliced isoforms from brain links genetic risk factors for autism. (PMID: 24722188) Corominas R. … Iakoucheva L.M. (Nat. Commun. 2014) 3 64
  5. A proteome-scale map of the human interactome network. (PMID: 25416956) Rolland T. … Vidal M. (Cell 2014) 3 64

Products for SERTAD3 Gene

Sources for SERTAD3 Gene

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