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Aliases for SERPINB9P1 Gene

Aliases for SERPINB9P1 Gene

  • Serpin Family B Member 9 Pseudogene 1 2 3 5
  • Serpin Peptidase Inhibitor, Clade B (Ovalbumin), Member 9, Pseudogene 1 2 3
  • Serpin Peptidase Inhibitor, Clade B (Ovalbumin), Member 9 Pseudogene 3
  • SERPINB9P 3

External Ids for SERPINB9P1 Gene

Previous GeneCards Identifiers for SERPINB9P1 Gene

  • GC06M002867
  • GC06M002860
  • GC06M002863
  • GC06M002869
  • GC06M002871
  • GC06M002874
  • GC06M002876
  • GC06M002878

Summaries for SERPINB9P1 Gene

GeneCards Summary for SERPINB9P1 Gene

SERPINB9P1 (Serpin Family B Member 9 Pseudogene 1) is a Pseudogene.

Additional gene information for SERPINB9P1 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for SERPINB9P1 Gene

Genomics for SERPINB9P1 Gene

GeneHancer (GH) Regulatory Elements for SERPINB9P1 Gene

Promoters and enhancers for SERPINB9P1 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH06I002874 Promoter/Enhancer 2.2 FANTOM5 Ensembl ENCODE dbSUPER 52.9 +3.3 3312 7.9 HDGF FOXA2 MLX ARID4B SIN3A DMAP1 IRF4 YY1 SLC30A9 ZNF143 PIR60730 SERPINB9P1 SERPINB9 SERPINB1 ENSG00000232999 NQO2 SERPINB6 ENSG00000272320 LINC01011 PSMG4
GH06I002836 Promoter/Enhancer 2.5 EPDnew Ensembl ENCODE dbSUPER 13.8 +41.2 41182 6.7 SMAD1 FOXA2 MLX ARNT ZFP64 ARID4B SIN3A FEZF1 DMAP1 SLC30A9 SERPINB1 SERPINB9 SERPINB9P1 LINC01011 NQO2 ENSG00000232999 SERPINB6 WRNIP1 MYLK4 GC06P002818
GH06I002861 Enhancer 1.6 FANTOM5 Ensembl ENCODE dbSUPER 16.4 +18.8 18778 3.3 PKNOX1 FOXA2 NFRKB BMI1 BATF IRF4 POLR2B ZNF143 ATF7 ETV6 SERPINB9 SERPINB9P1 SERPINB1 NQO2 RIPK1 PIR43328 PIR60730
GH06I002852 Promoter/Enhancer 2.1 FANTOM5 Ensembl ENCODE dbSUPER 8.8 +25.2 25248 8 HDGF PKNOX1 SMAD1 ARNT ZFP64 FEZF1 DMAP1 ZNF2 YY1 POLR2B SERPINB9 PSMG4 SERPINB1 SERPINB9P1 HTATSF1P2 RIPK1 NQO2 MIR4645 PIR43328
GH06I002886 Enhancer 1.2 FANTOM5 Ensembl dbSUPER 13 -5.1 -5052 0.5 FOXA2 SAP130 CEBPG RARA IRF9 ZSCAN5C ATF7 NR2F6 TFE3 ZNF10 SERPINB9 ENSG00000232999 SERPINB9P1 NQO2 SERPINB6 LINC01011 SERPINB1 RIPK1 LOC101927730
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around SERPINB9P1 on UCSC Golden Path with GeneCards custom track

Genomic Locations for SERPINB9P1 Gene

Genomic Locations for SERPINB9P1 Gene
chr6:2,854,657-2,881,407
(GRCh38/hg38)
Size:
26,751 bases
Orientation:
Minus strand
chr6:2,854,891-2,881,641
(GRCh37/hg19)

Genomic View for SERPINB9P1 Gene

Genes around SERPINB9P1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
SERPINB9P1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for SERPINB9P1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for SERPINB9P1 Gene

Proteins for SERPINB9P1 Gene

Post-translational modifications for SERPINB9P1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for SERPINB9P1 Gene

Domains & Families for SERPINB9P1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for SERPINB9P1 Gene

Function for SERPINB9P1 Gene

Phenotypes From GWAS Catalog for SERPINB9P1 Gene

Phenotypes for SERPINB9P1 Gene

GenomeRNAi human phenotypes for SERPINB9P1:
genes like me logo Genes that share phenotypes with SERPINB9P1: view

Animal Model Products

Inhibitory RNA Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for SERPINB9P1 Gene

Localization for SERPINB9P1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for SERPINB9P1 Gene

Pathways & Interactions for SERPINB9P1 Gene

SuperPathways for SERPINB9P1 Gene

No Data Available

Interacting Proteins for SERPINB9P1 Gene

Gene Ontology (GO) - Biological Process for SERPINB9P1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for SERPINB9P1 Gene

Drugs & Compounds for SERPINB9P1 Gene

No Compound Related Data Available

Transcripts for SERPINB9P1 Gene

mRNA/cDNA for SERPINB9P1 Gene

(1) REFSEQ mRNAs :
(19) Selected AceView cDNA sequences:
(2) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for SERPINB9P1 Gene

No ASD Table

Relevant External Links for SERPINB9P1 Gene

GeneLoc Exon Structure for
SERPINB9P1
ECgene alternative splicing isoforms for
SERPINB9P1

Expression for SERPINB9P1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for SERPINB9P1 Gene

mRNA differential expression in normal tissues according to GTEx for SERPINB9P1 Gene

This gene is overexpressed in Spleen (x4.2).

NURSA nuclear receptor signaling pathways regulating expression of SERPINB9P1 Gene:

SERPINB9P1
genes like me logo Genes that share expression patterns with SERPINB9P1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for SERPINB9P1 Gene

Orthologs for SERPINB9P1 Gene

Evolution for SERPINB9P1 Gene

ENSEMBL:
Gene Tree for SERPINB9P1 (if available)
TreeFam:
Gene Tree for SERPINB9P1 (if available)

No data available for Orthologs for SERPINB9P1 Gene

Paralogs for SERPINB9P1 Gene

No data available for Paralogs for SERPINB9P1 Gene

Variants for SERPINB9P1 Gene

Sequence variations from dbSNP and Humsavar for SERPINB9P1 Gene

SNP ID Clin Chr 06 pos Variation AA Info Type
rs1000042884 -- 2,863,927(-) G/T intron_variant
rs1000138896 -- 2,868,044(-) A/C intron_variant
rs1000238666 -- 2,872,576(-) G/A intron_variant
rs1000326450 -- 2,860,273(-) C/G/T intron_variant
rs1000373148 -- 2,863,790(-) A/C intron_variant

Structural Variations from Database of Genomic Variants (DGV) for SERPINB9P1 Gene

Variant ID Type Subtype PubMed ID
esv7271 CNV gain 19470904
nsv830575 CNV loss 17160897

Additional Variant Information for SERPINB9P1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
SERPINB9P1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for SERPINB9P1 Gene

Disorders for SERPINB9P1 Gene

Additional Disease Information for SERPINB9P1

No disorders were found for SERPINB9P1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for SERPINB9P1 Gene

Publications for SERPINB9P1 Gene

  1. Update of the human and mouse SERPIN gene superfamily. (PMID: 24172014) Heit C … Vasiliou V (Human genomics 2013) 2 3 58
  2. Personalized smoking cessation: interactions between nicotine dose, dependence and quit-success genotype score. (PMID: 20379614) Rose JE … Uhl GR (Molecular medicine (Cambridge, Mass.) 2010) 3 58
  3. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg RL … Mammalian Gene Collection Program Team (Proceedings of the National Academy of Sciences of the United States of America 2002) 3 58

Products for SERPINB9P1 Gene

Sources for SERPINB9P1 Gene

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