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Aliases for SERPINA13P Gene

Aliases for SERPINA13P Gene

  • Serpin Peptidase Inhibitor, Clade A (Alpha-1 Antiproteinase, Antitrypsin), Member 13, Pseudogene 2 3
  • Serine (Or Cysteine) Proteinase Inhibitor, Clade A (Alpha-1 Antiproteinase, Antitrypsin), Member 13 2 3
  • SERPINA13 3 4
  • Serpin Peptidase Inhibitor, Clade A (Alpha-1 Antiproteinase, Antitrypsin), Member 13 (Pseudogene) 3
  • Serpin Peptidase Inhibitor, Clade A (Alpha-1 Antiproteinase, Antitrypsin), Member 13 2
  • Protease Inhibitor 3
  • UNQ6121 3

External Ids for SERPINA13P Gene

Previous HGNC Symbols for SERPINA13P Gene

  • SERPINA13

Previous GeneCards Identifiers for SERPINA13P Gene

  • GC14P095109

Summaries for SERPINA13P Gene

GeneCards Summary for SERPINA13P Gene

SERPINA13P (Serpin Peptidase Inhibitor, Clade A (Alpha-1 Antiproteinase, Antitrypsin), Member 13, Pseudogene) is a Pseudogene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for SERPINA13P Gene

Genomics for SERPINA13P Gene

Genomic Location for SERPINA13P Gene

Start:
94,640,725 bp from pter
End:
94,646,994 bp from pter
Size:
6,270 bases
Orientation:
Plus strand

Genomic View for SERPINA13P Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for SERPINA13P Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for SERPINA13P Gene

No data available for Regulatory Elements for SERPINA13P Gene

Proteins for SERPINA13P Gene

  • Protein details for SERPINA13P Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Q6UXR4-SPA13_HUMAN
    Recommended name:
    Putative serpin A13
    Protein Accession:
    Q6UXR4
    Secondary Accessions:

    Protein attributes for SERPINA13P Gene

    Size:
    307 amino acids
    Molecular mass:
    34864 Da
    Quaternary structure:
    No Data Available

neXtProt entry for SERPINA13P Gene

Proteomics data for SERPINA13P Gene at MOPED

Post-translational modifications for SERPINA13P Gene

  • Glycosylation at Asn150 and Asn250

No data available for DME Specific Peptides for SERPINA13P Gene

Domains for SERPINA13P Gene

Gene Families for SERPINA13P Gene

HGNC:
  • SERPIN :Serine (or cysteine) peptidase inhibitors

Protein Domains for SERPINA13P Gene

InterPro:
ProtoNet:

Graphical View of Domain Structure for InterPro Entry

Q6UXR4

UniProtKB/Swiss-Prot:

SPA13_HUMAN :
  • Q6UXR4
Family:
  • Belongs to the serpin family.
genes like me logo Genes that share domains with SERPINA13P: view

No data available for Suggested Antigen Peptide Sequences for SERPINA13P Gene

Function for SERPINA13P Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for SERPINA13P Gene

Localization for SERPINA13P Gene

Subcellular locations from UniProtKB/Swiss-Prot for SERPINA13P Gene

Secreted.

No data available for Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for SERPINA13P Gene

Pathways for SERPINA13P Gene

SuperPathways for SERPINA13P Gene

No Data Available

Interacting Proteins for SERPINA13P Gene

Gene Ontology (GO) - Biological Process for SERPINA13P Gene

None

No data available for Pathways by source for SERPINA13P Gene

Transcripts for SERPINA13P Gene

mRNA/cDNA for SERPINA13P Gene

(2) Selected AceView cDNA sequences:
(2) Ensembl transcripts including schematic representations, and UCSC links where relevant :

miRNA Products

  • QIAGEN qRT-PCR Assays for microRNAs that regulate SERPINA13P
    • Block miRNA regulation of SERPINA13P using miScript Target Protectors

    Inhibitory RNA Products

    • Predesigned siRNA for gene silencing in human,mouse,rat for SERPINA13P

    Primer Products

    • OriGene qSTAR qPCR primer pairs in human,mouse,rat for SERPINA13P
    • QuantiTect SYBR Green Assays in human,mouse,rat
    • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
    • QuantiFast Probe-based Assays in human,mouse,rat

    Flow Cytometry Products

    Alternative Splicing Database (ASD) splice patterns (SP) for SERPINA13P Gene

    No ASD Table

    Relevant External Links for SERPINA13P Gene

    GeneLoc Exon Structure for
    SERPINA13P
    ECgene alternative splicing isoforms for
    SERPINA13P

    Expression for SERPINA13P Gene

    mRNA expression in normal human tissues for SERPINA13P Gene

    Integrated Proteomics: protein expression from ProteomicsDB and MOPED for SERPINA13P Gene

    SOURCE GeneReport for Unigene cluster for SERPINA13P Gene Hs.527795

    genes like me logo Genes that share expressions with SERPINA13P: view

    In Situ Assay Products

    No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues and mRNA Expression by UniProt/SwissProt for SERPINA13P Gene

    Orthologs for SERPINA13P Gene

    Evolution for SERPINA13P Gene

    ENSEMBL:
    Gene Tree for SERPINA13P (if available)
    TreeFam:
    Gene Tree for SERPINA13P (if available)

    No data available for Orthologs for SERPINA13P Gene

    Paralogs for SERPINA13P Gene

    Selected SIMAP similar genes for SERPINA13P Gene using alignment to 1 proteins:

    genes like me logo Genes that share paralogs with SERPINA13P: view

    No data available for Paralogs for SERPINA13P Gene

    Variants for SERPINA13P Gene

    Sequence variations from dbSNP and Humsavar for SERPINA13P Gene

    SNP ID Clin Chr 14 pos Sequence Context AA Info Type MAF
    rs1884084 -- 94,643,680(+) AGGCA(G/T)CTGGA nc-transcript-variant
    rs4900241 -- 94,642,433(+) TTTTT(A/T)AAGTC intron-variant
    rs4905226 -- 94,641,636(+) TCACC(C/T)TCACC nc-transcript-variant
    rs4905227 -- 94,644,749(+) TCTTC(C/G)TCATA intron-variant
    rs6575450 -- 94,640,536(+) aaaca(C/T)gggat upstream-variant-2KB

    Relevant External Links for SERPINA13P Gene

    HapMap Linkage Disequilibrium report
    SERPINA13P

    No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Structural Variations from Database of Genomic Variants (DGV) for SERPINA13P Gene

    Disorders for SERPINA13P Gene

    No disorders were found for SERPINA13P Gene.

    No data available for UniProtKB/Swiss-Prot for SERPINA13P Gene

    Publications for SERPINA13P Gene

    1. The secreted protein discovery initiative (SPDI), a large-scale effort to identify novel human secreted and transmembrane proteins: a bioinformatics assessment. (PMID: 12975309) Clark H.F. … Gray A.M. (Genome Res. 2003) 3 4
    2. Sequence organization and matrix attachment regions of the human serine protease inhibitor gene cluster at 14q32.1. (PMID: 15014966) Namciu S.J. … Fournier R.E. (Mamm. Genome 2004) 2 3
    3. Human-specific nonsense mutations identified by genome sequence comparisons. (PMID: 16395595) Hahn Y. … Lee B. (Hum. Genet. 2006) 2 3
    4. Update of the human and mouse SERPIN gene superfamily. (PMID: 24172014) Heit C. … Vasiliou V. (Hum. Genomics 2013) 2 3
    5. Variability in the common genetic architecture of social-communication spectrum phenotypes during childhood and adolescence. (PMID: 24564958) St Pourcain B. … Smith G.D. (Mol Autism 2014) 3

    Products for SERPINA13P Gene

    • QIAGEN qRT-PCR Assays for microRNAs that regulate SERPINA13P
      • QuantiTect SYBR Green Assays in human,mouse,rat
      • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
      • QuantiFast Probe-based Assays in human,mouse,rat
      • Predesigned siRNA for gene silencing in human,mouse,rat for SERPINA13P
      • Block miRNA regulation of SERPINA13P using miScript Target Protectors

      Sources for SERPINA13P Gene

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