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Aliases for SERPINA13P Gene

Aliases for SERPINA13P Gene

  • Serpin Peptidase Inhibitor, Clade A (Alpha-1 Antiproteinase, Antitrypsin), Member 13, Pseudogene 2 3
  • Serine (Or Cysteine) Proteinase Inhibitor, Clade A (Alpha-1 Antiproteinase, Antitrypsin), Member 13 2 3
  • SERPINA13 3 4
  • Serpin Peptidase Inhibitor, Clade A (Alpha-1 Antiproteinase, Antitrypsin), Member 13 (Pseudogene) 3
  • Serpin Peptidase Inhibitor, Clade A (Alpha-1 Antiproteinase, Antitrypsin), Member 13 2
  • Protease Inhibitor 3
  • UNQ6121 3

External Ids for SERPINA13P Gene

Previous HGNC Symbols for SERPINA13P Gene

  • SERPINA13

Previous GeneCards Identifiers for SERPINA13P Gene

  • GC14P095109

Summaries for SERPINA13P Gene

GeneCards Summary for SERPINA13P Gene

SERPINA13P (Serpin Peptidase Inhibitor, Clade A (Alpha-1 Antiproteinase, Antitrypsin), Member 13, Pseudogene) is a Pseudogene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for SERPINA13P Gene

Genomics for SERPINA13P Gene

Genomic Location for SERPINA13P Gene

Chromosome:
14
Start:
94,640,725 bp from pter
End:
94,646,994 bp from pter
Size:
6,270 bases
Orientation:
Plus strand

Genomic View for SERPINA13P Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for SERPINA13P Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for SERPINA13P Gene

No data available for Regulatory Elements for SERPINA13P Gene

Proteins for SERPINA13P Gene

  • Protein details for SERPINA13P Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Q6UXR4-SPA13_HUMAN
    Recommended name:
    Putative serpin A13
    Protein Accession:
    Q6UXR4

    Protein attributes for SERPINA13P Gene

    Size:
    307 amino acids
    Molecular mass:
    34864 Da
    Quaternary structure:
    No Data Available

neXtProt entry for SERPINA13P Gene

Proteomics data for SERPINA13P Gene at MOPED

Post-translational modifications for SERPINA13P Gene

  • Glycosylation at Asn 150 and Asn 250

No data available for DME Specific Peptides for SERPINA13P Gene

Domains & Families for SERPINA13P Gene

Gene Families for SERPINA13P Gene

Protein Domains for SERPINA13P Gene

InterPro:
ProtoNet:

Suggested Antigen Peptide Sequences for SERPINA13P Gene

GenScript: Design optimal peptide antigens:

Graphical View of Domain Structure for InterPro Entry

Q6UXR4

UniProtKB/Swiss-Prot:

SPA13_HUMAN :
  • Belongs to the serpin family.
Family:
  • Belongs to the serpin family.
genes like me logo Genes that share domains with SERPINA13P: view

Function for SERPINA13P Gene

genes like me logo Genes that share phenotypes with SERPINA13P: view

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for SERPINA13P Gene

Localization for SERPINA13P Gene

Subcellular locations from UniProtKB/Swiss-Prot for SERPINA13P Gene

Secreted.

No data available for Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for SERPINA13P Gene

Pathways & Interactions for SERPINA13P Gene

SuperPathways for SERPINA13P Gene

No Data Available

Interacting Proteins for SERPINA13P Gene

Gene Ontology (GO) - Biological Process for SERPINA13P Gene

None

No data available for Pathways by source and SIGNOR curated interactions for SERPINA13P Gene

Drugs & Compounds for SERPINA13P Gene

No Compound Related Data Available

Transcripts for SERPINA13P Gene

mRNA/cDNA for SERPINA13P Gene

(2) Selected AceView cDNA sequences:
(2) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for SERPINA13P Gene

No ASD Table

Relevant External Links for SERPINA13P Gene

GeneLoc Exon Structure for
SERPINA13P
ECgene alternative splicing isoforms for
SERPINA13P

Expression for SERPINA13P Gene

mRNA expression in normal human tissues for SERPINA13P Gene

Protein differential expression in normal tissues from HIPED for SERPINA13P Gene

This gene is overexpressed in Spinal cord (50.4) and Testis (18.4).

Integrated Proteomics: protein expression in normal tissues and cell lines from ProteomicsDB and MOPED for SERPINA13P Gene



SOURCE GeneReport for Unigene cluster for SERPINA13P Gene Hs.527795

genes like me logo Genes that share expression patterns with SERPINA13P: view

Protein tissue co-expression partners for SERPINA13P Gene

Primer Products

  • QuantiTect SYBR Green Assays in human,mouse,rat
  • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
  • QuantiFast Probe-based Assays in human,mouse,rat

In Situ Assay Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues and mRNA Expression by UniProt/SwissProt for SERPINA13P Gene

Orthologs for SERPINA13P Gene

Evolution for SERPINA13P Gene

ENSEMBL:
Gene Tree for SERPINA13P (if available)
TreeFam:
Gene Tree for SERPINA13P (if available)

No data available for Orthologs for SERPINA13P Gene

Paralogs for SERPINA13P Gene

(9) SIMAP similar genes for SERPINA13P Gene using alignment to 1 proteins:

genes like me logo Genes that share paralogs with SERPINA13P: view

No data available for Paralogs for SERPINA13P Gene

Variants for SERPINA13P Gene

Sequence variations from dbSNP and Humsavar for SERPINA13P Gene

SNP ID Clin Chr 14 pos Sequence Context AA Info Type MAF
rs116842636 -- 94,639,372(+) AAGTG(C/T)AAACT upstream-variant-2KB
rs117083618 -- 94,647,149(+) GCTAG(A/C)AAGCA downstream-variant-500B
rs138039972 -- 94,639,952(+) GCAGA(A/G)GTGGG upstream-variant-2KB
rs138068861 -- 94,641,490(+) TGCCT(A/T)CAAGC nc-transcript-variant
rs138081290 -- 94,642,552(+) TAATA(C/G)TGACG intron-variant

Relevant External Links for SERPINA13P Gene

HapMap Linkage Disequilibrium report
SERPINA13P

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for SERPINA13P Gene

Disorders for SERPINA13P Gene

Relevant External Links for SERPINA13P

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
SERPINA13P
genes like me logo Genes that share disorders with SERPINA13P: view

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for SERPINA13P Gene

Publications for SERPINA13P Gene

  1. Update of the human and mouse SERPIN gene superfamily. (PMID: 24172014) Heit C. … Vasiliou V. (Hum. Genomics 2013) 2 67
  2. Human-specific nonsense mutations identified by genome sequence comparisons. (PMID: 16395595) Hahn Y. … Lee B. (Hum. Genet. 2006) 2 67
  3. Sequence organization and matrix attachment regions of the human serine protease inhibitor gene cluster at 14q32.1. (PMID: 15014966) Namciu S.J. … Fournier R.E. (Mamm. Genome 2004) 2 67
  4. Variability in the common genetic architecture of social-communication spectrum phenotypes during childhood and adolescence. (PMID: 24564958) St Pourcain B. … Smith G.D. (Mol Autism 2014) 67
  5. Polymorphisms in LMNA and near a SERPINA13 gene are not associated with cognitive performance in Chinese elderly males without dementia. (PMID: 21903150) Yeh H.L. … Tsai S.J. (Neurosci. Lett. 2011) 67

Products for SERPINA13P Gene

Sources for SERPINA13P Gene

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