SERHL2 Gene
protein-coding GIFtS : 48
GCID: GC22 P042949
serine hydrolase-like 2
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Aliasesfor SERHL2 gene
(According to
1 HGNC ,
2 Entrez Gene ,
3 UniProtKB/Swiss-Prot ,
4 UniProtKB/TrEMBL , 5 OMIM , 6 GeneLoc ,
7 Ensembl ,
8 DME ,
9 miRBase ,
and/or 10 fRNAdb )About This Section Aliases Serine Hydrolase-Like 2 1 2 DJ222E13.11 Serine Hydrolase-Like Protein 22 EC 3.1.-.-3 SERHL3
Export aliases for SERHL2 gene to outside databases Previous GC identifers: GC22P041275 GC22P025910
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Summariesfor SERHL2 gene (According to Entrez Gene ,
Tocris Bioscience ,
Wikipedia's
Gene Wiki ,
PharmGKB ,
UniProtKB/Swiss-Prot ,
and/or
UniProtKB/TrEMBL )
About This Section UniProtKB/Swiss-Prot: SEHL2_HUMAN, Q9H4I8 Function : Probable serine hydrolase. May be related to cell muscle hypertrophy
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Genomic Viewsfor SERHL2 gene
(According to
GeneLoc and/or
HGNC , and/or
Entrez Gene (NCBI build 37) ,
and/or miRBase ,
Genomic Views according to
UCSC (hg19) and
Ensembl (release 69) ,
Regulatory elements and Epigenetics data according to
QIAGEN ,
SABiosciences , and/or
SwitchGear Genomics )About This Section RefSeq DNA sequence: NC_000022.10 NC_018933.1 NT_011520.12 Regulatory elements: SABiosciences Regulatory transcription factor binding sites in the SERHL2 gene promoter: FOXF2 MyoD RelA POU3F2 NF-kappaB PPAR-gamma1 COMP1 PPAR-gamma2 NF-kappaB1 En-1 Other transcription factors Search SABiosciences Chromatin IP Primers for SERHL2 Epigenetics: QIAGEN PyroMark CpG Assay predesigned Pyrosequencing DNA Methylation assays in human , mouse , rat SERHL2
Genomic Location: Genomic View : UCSC Golden Path with GeneCards custom track Entrez Gene cytogenetic band: 22q13 Ensembl cytogenetic band: 22q13.2 HGNC cytogenetic band: 22q13 SERHL2 Gene in genomic location: bands according to Ensembl, locations according to
(and/or Entrez Gene and/or Ensembl if different) GeneLoc information about chromosome 22 GeneLoc Exon Structure
GeneLoc location for GC22P042949: view genomic region
(about GC identifiers )
Start:
42,949,623 bp from pter
End:
42,970,388 bp from pter
Size:
20,766 bases
Orientation:
plus strand
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Proteinsfor SERHL2 gene
(According to
1 UniProtKB ,
HORDE ,
neXtProt ,
Ensembl ,
and/or Reactome ,
Modification sites according to 2 PhosphoSitePlus ,
Specific Peptides from DME ,
Protein expression images according to data from SPIRE MOPED and PaxDb ,
RefSeq according to NCBI ,
PDB rendering according to OCA and/or Proteopedia ,
Recombinant Proteins
from
EMD Millipore ,
R&D Systems ,
GenScript ,
Enzo Life Sciences ,
OriGene ,
Novus Biologicals ,
Sino Biological ,
ProSpec , and/or
Uscn ,
Biochemical Assays by
EMD Millipore ,
R&D Systems ,
OriGene ,
GenScript ,
Cell Signaling Technology ,
Enzo Life Sciences , and/or
Uscn ,
Ontologies according to Gene
Ontology Consortium 01 Mar 2013 and
Entrez Gene ,
Antibodies by
EMD Millipore ,
R&D Systems ,
GenScript ,
Cell Signaling Technology ,
OriGene ,
Novus Biologicals ,
Thermo Fisher Scientific ,
Abcam , and/or
Uscn )
About This Section UniProtKB/Swiss-Prot: SEHL2_HUMAN, Q9H4I8 (See
protein sequence )Recommended Name: Serine hydrolase-like protein 2 Size : 314 amino acids; 35369 Da
Subcellular location : Cytoplasm, perinuclear region (By similarity). Peroxisome (By similarity). Note=Concentrated inperinuclear vesicles (By similarity). May be located in peroxisomes (By similarity)
Miscellaneous : This gene may have been partially duplicated (see SERHL)
Secondary accessions : B1AHE9 B1AHF0 Q0VDJ1 Q5H973 Q9BR29 Q9BR30 Q9Y3I9Alternative splicing : 3 isoforms : Q9H4I8-1 Q9H4I8-2 Q9H4I8-3 Explore the universe of human proteins at neXtProt for SERHL2: NX_Q9H4I8 Post-translational modifications:
View modification sites using PhosphoSitePlus 2 View neXtProt modification sites for NX_Q9H4I8 SERHL2 Protein expression data from MOPED and PaxDb : About this image REFSEQ proteins: NP_055324.2 ENSEMBL proteins: ENSP00000395860 ENSP00000435091 ENSP00000413512 ENSP00000331376 ENSP00000385691 ENSP00000336578 ENSP00000342425 Human Recombinant Protein Products for SERHL2: Gene Ontology (GO): 5 cellular component terms (GO ID links to tree view) : About this table
SERHL2 for ontologies About GeneDecksing SERHL2 Antibody Products: Assay Products for SERHL2:
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Protein
Domains / Familiesfor SERHL2 gene (According to InterPro , ProtoNet ,
UniProtKB , and/or BLOCKS ,
Sets of similar genes according to GeneDecks )
About This Section
SERHL2 for domains About GeneDecksing 1 InterPro domain/family :
Graphical View of Domain Structure for InterPro Entry Q9H4I8 ProtoNet protein and cluster: Q9H4I8
1 Blocks protein family : IPB000073 Alpha/beta hydrolase fold UniProtKB/Swiss-Prot: SEHL2_HUMAN, Q9H4I8 Similarity : Belongs to the AB hydrolase superfamily
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Functionfor SERHL2 gene
(According to 1 UniProtKB ,
Genatlas ,
LifeMap Discovery™ ,
IUBMB , and/or
2 DME ,
Human phenotypes from GenomeRNAi ,
Animal models from MGI Mar 06 2013,
inGenious Targeting Laboratory ,
bound targets from SABiosciences ,
miRNA Gene Targets from miRTarBase ,
shRNA from
OriGene ,
Sirion Biotech ,
RNAi from
EMD Millipore ,
siRNAs from
OriGene ,
QIAGEN ,
microRNA from QIAGEN ,
Gene Editing from DNA2.0 ,
Sirion Biotech ,
Clones from EMD Millipore ,
OriGene ,
SwitchGear Genomics ,
GenScript ,
Sino Biological ,
DNA2.0 ,
and Vector BioLabs ,
Cell Lines from GenScript ,
LifeMap BioReagents ,
Sirion Biotech ,
In Situ Hybridization Assays from Advanced Cell Diagnostics ,
Ontologies according to Gene Ontology Consortium 01 Mar 2013 via
Entrez Gene .)
About This Section Molecular Function: UniProtKB/Swiss-Prot Summary: SEHL2_HUMAN, Q9H4I8 Function : Probable serine hydrolase. May be related to cell muscle hypertrophy Enzyme Number (IUBMB): EC 3.1.-.- 1
Gene Ontology (GO): 2 molecular function terms (GO ID links to tree view) : About this table
GO ID Qualified GO term Evidence PubMed IDs GO:0003674 molecular_function
ND -- GO:0016787 hydrolase activity
IEA --
SERHL2 for ontologies About GeneDecksing Animal Models: Clone Products: Browse Clones for the Expression of Recombinant Proteins Available from EMD Millipore OriGene Myc/DDK tagged cDNA clones in CMV expression vector in human , mouse , rat for SERHL2 (see all 2 ) OriGene untagged cDNA clones in CMV expression vector in human , mouse , rat for SERHL2OriGene custom cloning services - gene synthesis, subcloning, mutagenesis,
variant library, vector shuttling GenScript: all cDNA clones in your preferred vector: SERHL2 (NM_014509 ) Browse Sino Biological Human cDNA Clones DNA2.0 Custom Codon Optimized Gene
Synthesis Service for SERHL2 Vector BioLabs ready-to-use adenovirus/AAV for human , mouse , rat SERHL2
In Situ Assay Products: Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for SERHL2
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Pathways & Interactionsfor SERHL2 gene
(Pathways according to
EMD Millipore ,
R&D Systems ,
Cell Signaling Technology ,
KEGG ,
PharmGKB ,
BioSystems ,
Reactome ,
Tocris Bioscience ,
GeneGo (Thomson Reuters) ,
QIAGEN ,
and/or UniProtKB ,
Sets of similar genes according to GeneDecks ,
Interaction Networks according to
SABiosciences ,
and/or STRING ,
Interactions according to 1 UniProtKB ,
2 MINT ,
3 I2D , and/or
4 STRING ,
with links to IntAct and
Ensembl ,
Ontologies according to Gene Ontology Consortium 01 Mar 2013 via
Entrez Gene) .
About This Section Interactions: Search SABiosciences Gene Network CentralTM Interacting Genes and Proteins Networks for SERHL2 STRING Interaction
Network Preview (showing 1 interactants - click image to see more details)1 Interacting protein for SERHL2 (ENSP00000331376 4 ) via UniProtKB, MINT, STRING , and/or I2D About this table Gene Ontology (GO): 1 biological process term (GO ID links to tree view) : About this table
GO ID Qualified GO term Evidence PubMed IDs GO:0008150 biological_process
ND --
SERHL2 for ontologies About GeneDecksing
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Drugs & Compoundsfor SERHL2 gene (Chemical Compounds according to UniProtKB , Enzo Life Sciences ,
EMD Millipore , Tocris Bioscience
HMDB ,
BitterDB , and/or
Novoseek , and Drugs according to
DrugBank ,
Enzo Life Sciences , and/or
PharmGKB , with drugs/clinical trials/news
search links to CenterWatch )
About This Section Browse Tocris compounds for SERHL2 Search CenterWatch for drugs/clinical trials and news about SERHL2 / SEHL2
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Transcriptsfor SERHL2 gene (Secondary structures according to
fRNAdb ,
GenBank/EMBL/DDBJ Accessions according to
Unigene
(Build 235 Homo sapiens; Mar 10 2013) or GenBank , RefSeq according to Entrez Gene ,
DOTS (version 10), and/or
AceView ,
transcript ids from Ensembl
with links to UCSC ,
exon structure from GeneLoc ,
alternative splicing isoforms according to ASD and/or
ECgene ,
RNAi Products from
EMD Millipore ,
siRNAs from
OriGene ,
QIAGEN ,
shRNA from
OriGene ,
Sirion Biotech ,
microRNA from QIAGEN ,
Tagged/untagged cDNA clones from
OriGene ,
SwitchGear Genomics ,
GenScript ,
DNA2.0 ,
Vector BioLabs ,
Primers from
OriGene ,
SABiosciences , and/or
QIAGEN
)About This Section REFSEQ mRNAs for SERHL2 gene: NM_014509.3 Unigene Cluster for SERHL2:
Serine hydrolase-like 2 Hs.728878 [show with all ESTs ] Unigene Representative Sequence: AK294584 10 Ensembl transcripts including schematic representations, and UCSC links where relevant : ENST00000447870 ENST00000477564 (uc010gyy.3 uc011apo.2 ) ENST00000534080 ENST00000416156 (uc011apn.1 ) ENST00000327678 (uc003bcr.3 uc010gyz.3 )ENST00000527167 ENST00000407614 ENST00000335879 ENST00000472589 ENST00000340239 Clone Products: OriGene Myc/DDK tagged cDNA clones in CMV expression vector in human , mouse , rat for SERHL2 (see all 2 ) OriGene untagged cDNA clones in CMV expression vector in human , mouse , rat for SERHL2OriGene custom cloning services - gene synthesis, subcloning, mutagenesis,
variant library, vector shuttling GenScript: all cDNA clones in your preferred vector: SERHL2 (NM_014509 ) DNA2.0 Custom Codon Optimized Gene
Synthesis Service for SERHL2 Vector BioLabs ready-to-use adenovirus/AAV for human , mouse , rat SERHL2
Additional cDNA sequence: AK294584.1 AK295223.1 AL450314.1 AL589866.1 AL590118.1 AL590120.1 BC119650.2 BC119651.1 BC127635.1 BC127636.1 CR456455.1
11 DOTS entries : DT.451575 DT.92449660
DT.97854916 DT.100834192 DT.208196 DT.120649679 DT.100648969 DT.209210 DT.102843074 DT.97854914 DT.99949605 24/103 AceView cDNA sequences (see all 103 ):
NM_014509 BM704551 AA975753 BM473055 AL450314 BM992883 AL590120 NM_170694 AK094872 CR626440 CD723288 AL365513 BM505049 BM824445 AL590118 BU684615 H55243 CD367673 BX446208 BF508719 BX480309 BU616443 AI633848 CD625752 GeneLoc Exon Structure
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Expression for SERHL2 gene
(RNA expression data according to
H-InvDB ,
NONCODE ,
miRBase , and
RNAdb ,
Expression images according to data from
BioGPS ,
Illumina Human BodyMap , and
CGAP
SAGE ,
Sets of similar genes according to GeneDecks ,
in vivo and in vitro expression data from LifeMap Discovery™ ,
plus additional links to
Genevestigator , and/or
SOURCE , and/or
BioGPS , and/or
UniProtKB ,
PCR Arrays from
SABiosciences ,
Primers from
OriGene ,
SABiosciences , and/or
QIAGEN ,
In Situ Hybridization Assays from Advanced Cell Diagnostics )
About This Section SERHL2 expression in normal human tissues (normalized intensities) See probesets specificity/sensitivity at GeneAnnot About this image BioGPS CGAP TAG: CTCCCAGCCCAbout this image SERHL2 expression in embryonic tissues and stem cells Expression by the Database of Embryonic development, Stem cell research, and
Regenerative medicine About this table
Stem Cell Differentiation: 1 LifeMap Cell Name Category Definitive endoderm-like cells (A scalable, suspensi... )Expression: Positive Negative
Selective markerExperimental details:
Curated
Microarrays
In-situ hybridization
See SERHL2 Protein Expression from SPIRE MOPED and PaxDB Genevestigator expression for SERHL2 SOURCE GeneReport for Unigene cluster: Hs.728878 SABiosciences Custom PCR Arrays for SERHL2 Primer Products: OriGene genome-wide validated SYBR primer pairs in human , mouse , rat for SERHL2Browse OriGene validated miRNA SYBR primer pairs Search SABiosciences RT2 qPCR
Primer Assays in human, mouse, rat SERHL2 QIAGEN QuantiTect SYBR Green Assays in human , mouse , rat SERHL2 QIAGEN QuantiFast Probe-based Assays in human , mouse , rat SERHL2 In Situ Assay Products: Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for SERHL2
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Orthologsfor SERHL2 gene
(Orthologs according to
1,2 HomoloGene (2 older version, for species not in 1 newer version),
3 euGenes ,
4 SGD
,
5 MGI Mar 06 2013,
with possible further links to
Flybase
and/or
WormBase ,
and/or
6 Ensembl pan taxonomic compara ,
Gene Trees according to Ensembl and
TreeFam )
About This Section
This gene was present in the common ancestor of animals.
Orthologs for SERHL2 gene from 6/20 species (see all 20 ) About this table
ENSEMBL Gene Tree for SERHL2 (if available)TreeFam Gene Tree for SERHL2 (if available)
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Paralogsfor SERHL2 gene (Paralogs according to
1 HomoloGene , 2 Ensembl , and 3 SIMAP , Pseudogenes according to 4 Pseudogene.org Build 68)About This Section Paralogs for SERHL2 gene 2 SIMAP similar genes for SERHL2 using alignment to 6 protein entries: SEHL2_HUMAN (see all proteins ):SERHL dJ222E13.1
SERHL2 for paralogs About GeneDecksing 2 Pseudogenes.org Pseudogenes for SERHL2 PGOHUM00000250343 PGOHUM00000250344
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Genomic Variantsfor SERHL2 gene (SNPs/Variants according to the
1 NCBI SNP Database ,
2 Ensembl ,
3 PupaSUITE ,
UniProtKB , and
DNA2.0 ,
Linkage Disequilibrium by HapMap ,
Structural Variations(CNVs/InDels/Inversions) from the Database of Genomic Variants , Mutations from the Human Gene
Mutation Database (HGMD) and the Locus Specific Mutation
Databases (LSDB) , Blood group antigen gene mutations by BGMUT ,
Resequencing Primers from QIAGEN ,
Cancer Mutation PCR Arrays and Assays and Copy Number PCR Arrays from SABiosciences )
About This Section
Genomic Data Transcription Related Data Allele Frequencies SNP ID Valid Clinical significance Chr 22 pos Sequence # AA Chg Type More # Allele freq Pop Total sample More
HapMap Linkage Disequilibrium report for SERHL2 (42949623 - 42970388 bp)
Structural Variations (Copy Number Variations, Insertions/Deletions, Inversions) Database of Genomic Variants (DGV): 9 variations for SERHL2 9 CNVs : 3242 32470 79589 7351 31094 79584 4129 67897 32471
SABiosciences Cancer Mutation PCR Assays
QIAGEN SeqTarget long-range PCR primers in human , mouse , rat for resequencing SERHL2
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Disorders
/ Diseasesfor SERHL2 gene
(in which this Gene is Involved, According to MalaCards ,
OMIM, UniProtKB ,
the University of Copenhagen DISEASES
database ,
Genatlas , GeneTests ,
GAD ,
HuGE Navigator ,
and/or TGDB .)
About This Section
SERHL2 for disorders About GeneDecksing 1 disease for SERHL2 : About MalaCards muscle hypertrophy Human Genome Epidemiology (HuGE) Navigator: SERHL2 (1 document)Export disorders for SERHL2 gene to outside databases
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Publicationsfor SERHL2 gene (in
PubMed .
Associations of this gene to articles via
1 Entrez Gene ,
2 UniProtKB/Swiss-Prot ,
3 HGNC ,
4 GAD ,
5 PharmGKB ,
6 HMDB ,
7 DrugBank ,
8 UniProtKB/TrEMBL ,
9 Novoseek , and/or
10 fRNAdb )
About This Section PubMed articles for SERHL2 gene integrated from 9 sources : (articles sorted by number of sources associating them with SERHL2) Utopia : connect your pdf to the dynamic world of online information
The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PubMed id 15489334) 1 , 2 Gerhard D.S....Malek J. (2004) Reevaluating human gene annotation: a second-generation analysis of chromosome 22. (PubMed id 12529303) 1 , 2 Collins J.E.... Dunham I. (2003) The DNA sequence of human chromosome 22. (PubMed id 10591208) 1 , 2 Dunham I....O'Brien K.P. (1999) Systematic and quantitative assessment of the ubiquiti n-modified proteome. (PubMed id 21906983) 1 Kim W....Gygi S.P. (2011) Genetic variants in nuclear-encoded mitochondrial gen es influence AIDS progression. (PubMed id 20877624) 1 Hendrickson S.L....O'Brien S.J. (2010) A genome annotation-driven approach to cloning the human ORFeome. (PubMed id 15461802) 1 Collins J.E.... Dunham I. (2004) Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PubMed id 12477932) 1 Strausberg R.L....Marra M.A. (2002) The sequence of the human genome. (PubMed id 11181995) 1 Venter J.C.... Zhu X. (2001) Identification of Serhl, a new member of the serine hydrolase family induced by passive stretch of skeletal muscle in vivo. (PubMed id 11352564) 1 Sadusky T.J....Coulton G.R. (2001) Early gene expression in human lymphocytes after gamma-irradiation-a genetic pattern with potential for biodosimetry. (PubMed id 18464067) 9 Turtoi A....Schneeweiss F.H. (2008)
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External Searches for SERHL2 gene
(in PubMed ,
OMIM , and NCBI Bookshelf ) About This Section
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Genome Databases showing SERHL2 gene
(According to
Entrez Gene ,
HGNC ,
AceView ,
euGenes ,
Ensembl ,
miRBase ,
ECgene ,
Kegg ,
and/or
H-InvDB )
About This Section
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Other Databases showing SERHL2 gene
(According to HUGE )
About This Section --
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Specialized Databases showing SERHL2 gene (According to PharmGKB ,
ATLAS , HORDE , IMGT , LEIDEN , UniProtKB/Swiss-Prot , and/or UniProtKB/TrEMBL ,Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot )About This Section
Name Description
PharmGKB entry for SERHL2 Pharmacogenomics, SNPs, Pathways
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About This Section Patent Information for SERHL2 gene: Search GeneIP for patents involving SERHL2 GeneCards and IP: Japan Patent Office Licenses GeneCards European Patent Office Licenses GeneCards Improving the IP Search
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Productsfor SERHL2 gene (Antibodies, recombinant proteins, and assays from EMD Millipore , R&D Systems , OriGene , QIAGEN , GenScript , Cell Signaling Technology , SABiosciences , Novus Biologicals , Sino Biological , Enzo Life Sciences , Abcam , ProSpec , Uscn , Thermo Fisher Scientific , Gene Editing from DNA2.0 and Sirion Biotech , Clones from EMD Millipore , OriGene , GenScript , Sino Biological , DNA2.0 , SwitchGear Genomics , Vector BioLabs , Cell lines from GenScript , LifeMap BioReagents , and Sirion Biotech , PCR Arrays from SABiosciences , Drugs and/or compounds from EMD Millipore , Tocris Bioscience , and/or
Enzo Life Sciences , In Situ Hybridization Assays from Advanced Cell Diagnostics , Animal models from inGenious Targeting Laboratory )About This Section
Browse OriGene Antibodies OriGene shRNA RFP for SERHL2 OriGene 29mer shRNA kits in GFP-retroviral vector in human , mouse , rat for SERHL2 OriGene genome-wide validated SYBR primer pairs in human , mouse , rat for SERHL2 OriGene Protein Over-expression Lysate for SERHL2 Browse OriGene Fluorogenic Cell Assay Kits OriGene siRNA for SERHL2 OriGene 3'-UTR Clone for SERHL2 OriGene untagged cDNA clones in CMV expression vector in human , mouse , rat for SERHL2 OriGene Myc/DDK tagged cDNA clones in CMV expression vector in human , mouse , rat for SERHL2 Browse OriGene GFP tagged cDNA clones in CMV expression vector Browse OriGene MicroRNA Expression Plasmids Browse OriGene basic RS shRNAs Browse OriGene validated miRNA SYBR primer pairs Browse OriGene full length recombinant human proteins expressed in human HEK293 cells OriGene custom cloning services - gene synthesis, subcloning, mutagenesis,
variant library, vector shuttling OriGene Custom Antibody Services for SERHL2 OriGene Custom Protein Services for SERHL2 OriGene Custom Immunoassay Development
QIAGEN Custom miScript Target Protector blocks miRNA-binding site of in human, mouse, rat SERHL2 QIAGEN SeqTarget long-range PCR primers in human , mouse , rat for resequencing SERHL2 QIAGEN PyroMark CpG Assay predesigned Pyrosequencing DNA Methylation assays in human , mouse , rat SERHL2 QIAGEN FlexiTube/FlexiPlate siRNA for gene silencing in human , mouse , rat SERHL2 QIAGEN QuantiFast Probe-based Assays in human , mouse , rat SERHL2 QIAGEN QuantiTect SYBR Green Assays in human , mouse , rat SERHL2
Search Tocris compounds for SERHL2
SERHL2 Proteins, Antibodies, CLIAs, and ELISAs
Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for SERHL2
ThermoFisher Antibody for SERHL2
Vector BioLabs ready-to-use adenovirus/AAV for human , mouse , rat SERHL2
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Aliases for SERHL2
Databases for SERHL2
Disorders / Diseases for SERHL2
Domains / Families for SERHL2
Drugs / Compounds for SERHL2
Expression for SERHL2
Function for SERHL2
Genomic Views for SERHL2
Intellectual Property for SERHL2
Orthologs for SERHL2
Paralogs for SERHL2
Pathways / Interactions for SERHL2
Products for SERHL2
Proteins for SERHL2
Publications for SERHL2
Search Box for SERHL2
Summaries for SERHL2
Transcripts for SERHL2
Variants for SERHL2
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