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Aliases for SEPT7P2 Gene

Aliases for SEPT7P2 Gene

  • Septin 7 Pseudogene 2 2 3
  • Septin 7B 2 3
  • Septin 13 2 3
  • SEPT13 3 6
  • SEPT7B 3

External Ids for SEPT7P2 Gene

Previous HGNC Symbols for SEPT7P2 Gene

  • SEPT7B
  • SEPT13

Previous GeneCards Identifiers for SEPT7P2 Gene

  • GC07M045763
  • GC07M045647

Summaries for SEPT7P2 Gene

Entrez Gene Summary for SEPT7P2 Gene

  • Septins, such as SEPT13, are conserved GTP-binding proteins that function as dynamic, regulatable scaffolds for the recruitment of other proteins. They are involved in membrane dynamics, vesicle trafficking, apoptosis, and cytoskeleton remodeling, as well as infection, neurodegeneration, and neoplasia (Hall et al., 2005 [PubMed 15915442]).[supplied by OMIM, Jul 2008]

GeneCards Summary for SEPT7P2 Gene

SEPT7P2 (Septin 7 Pseudogene 2) is a Pseudogene.

No data available for UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for SEPT7P2 Gene

Genomics for SEPT7P2 Gene

Genomic Location for SEPT7P2 Gene

Start:
45,723,780 bp from pter
End:
45,769,018 bp from pter
Size:
45,239 bases
Orientation:
Minus strand

Genomic View for SEPT7P2 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for SEPT7P2 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for SEPT7P2 Gene

No data available for Regulatory Elements for SEPT7P2 Gene

Proteins for SEPT7P2 Gene

Post-translational modifications for SEPT7P2 Gene

No Post-translational modifications

No data available for DME Specific Peptides for SEPT7P2 Gene

Domains for SEPT7P2 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for SEPT7P2 Gene

Function for SEPT7P2 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for SEPT7P2 Gene

Localization for SEPT7P2 Gene

Subcellular locations from

COMPARTMENTS
Jensen Localization Image for SEPT7P2 Gene COMPARTMENTS Subcellular localization image for SEPT7P2 gene
Compartment Confidence
cytosol 3
mitochondrion 1
nucleus 1

No data available for Subcellular locations from UniProtKB/Swiss-Prot and Gene Ontology (GO) - Cellular Components for SEPT7P2 Gene

Pathways for SEPT7P2 Gene

SuperPathways for SEPT7P2 Gene

No Data Available

Interacting Proteins for SEPT7P2 Gene

Gene Ontology (GO) - Biological Process for SEPT7P2 Gene

None

No data available for Pathways by source for SEPT7P2 Gene

Transcripts for SEPT7P2 Gene

mRNA/cDNA for SEPT7P2 Gene

(5) Additional mRNA sequences :
(9) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for SEPT7P2 Gene

Septin 7 pseudogene 2:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for SEPT7P2 Gene

No ASD Table

Relevant External Links for SEPT7P2 Gene

GeneLoc Exon Structure for
SEPT7P2
ECgene alternative splicing isoforms for
SEPT7P2

Expression for SEPT7P2 Gene

mRNA expression in normal human tissues for SEPT7P2 Gene

Integrated Proteomics: protein expression from for SEPT7P2 Gene

SOURCE GeneReport for Unigene cluster for SEPT7P2 Gene Hs.723477

genes like me logo Genes that share expressions with SEPT7P2: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues and mRNA Expression by UniProt/SwissProt for SEPT7P2 Gene

Orthologs for SEPT7P2 Gene

Evolution for SEPT7P2 Gene

ENSEMBL:
Gene Tree for SEPT7P2 (if available)
TreeFam:
Gene Tree for SEPT7P2 (if available)

No data available for Orthologs for SEPT7P2 Gene

Paralogs for SEPT7P2 Gene

No data available for Paralogs for SEPT7P2 Gene

Variants for SEPT7P2 Gene

Sequence variations from dbSNP and Humsavar for SEPT7P2 Gene

SNP ID Clin Chr 07 pos Sequence Context AA Info Type MAF
rs8932 -- 45,727,525(-) TATTA(A/G)TCAAA intron-variant
rs9993 -- 45,727,297(-) GAGTC(C/T)GGGAC intron-variant
rs15428 -- 45,727,404(+) TTTTT(C/T)CTACT intron-variant
rs1004028 -- 45,761,447(-) TTTTT(A/G)AACAG intron-variant
rs1533759 -- 45,730,254(+) TCCTG(C/G)CTAAC intron-variant

Structural Variations from Database of Genomic Variants (DGV) for SEPT7P2 Gene

Variant ID Type Subtype PubMed ID
esv2088604 CNV Deletion 18987734
esv2734336 CNV Deletion 23290073

Relevant External Links for SEPT7P2 Gene

HapMap Linkage Disequilibrium report
SEPT7P2

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for SEPT7P2 Gene

Disorders for SEPT7P2 Gene

No disorders were found for SEPT7P2 Gene.

No data available for UniProtKB/Swiss-Prot for SEPT7P2 Gene

Publications for SEPT7P2 Gene

  1. Expression profiling the human septin gene family. (PMID: 15915442) Hall P.A. … Russell S.E.H. (J. Pathol. 2005) 2 3
  2. Diversification of transcriptional modulation: large-scale identification and characterization of putative alternative promoters of human genes. (PMID: 16344560) Kimura K. … Sugano S. (Genome Res. 2006) 3
  3. Why do cellular proteins linked to K63-polyubiquitin chains not associate with proteasomes? (PMID: 23314748) Nathan J.A. … Goldberg A.L. (EMBO J. 2013) 3
  4. Toward a complete human genome sequence. (PMID: 9847074) Sulston J.E. … Waterston R. (Genome Res. 1998) 3
  5. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 3

Products for SEPT7P2 Gene

  • QIAGEN qRT-PCR Assays for microRNAs that regulate SEPT7P2
    • QuantiTect SYBR Green Assays in human,mouse,rat
    • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
    • QuantiFast Probe-based Assays in human,mouse,rat
    • Predesigned siRNA for gene silencing in human,mouse,rat for SEPT7P2
    • Block miRNA regulation of SEPT7P2 using miScript Target Protectors

    Sources for SEPT7P2 Gene

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